Preprints (not yet peer-reviewed)

102 downloads
260 views

Rugose Corals, often referred to as Horn Coral, are an extinct order of stony corals in the phylum Cnidaria. They lived from the Ordivician period to the end of the Permian period, and can be found worldwide. A new fossil of Siphonophrentis gigantea, a species...

["Evolutionary Studies","Marine Biology","Paleontology","Aquatic and Marine Chemistry"]
doi:10.7287/peerj.preprints.27282v2
37 downloads
121 views

Although amphipods are key components of the macro-fauna associated with Posidonia oceanica meadows, no studies focussed to date on the structure and diversity of such assemblages across the Mediterranean Sea. Here, we studied whether amphipod diversity reflects...

["Biogeography","Ecology","Marine Biology"]
doi:10.7287/peerj.preprints.27285v1
35 downloads
75 views

Describing cell morphology is a tricky task, prone to misinterpretation due to subjective nature of the human observer and his vocabulary limitations. Consequently, these limitations actuate prevalence of non-formalized, statistically unverifiable language use....

["Bioinformatics","Cell Biology","Computational Biology","Marine Biology","Mathematical Biology"]
doi:10.7287/peerj.preprints.27271v2
24 downloads
82 views

The fractal formalism in combination with linear image analysis enables statistically significant description and classification of “irregular” (in terms of Euclidean geometry) shapes, such as, outlines of in vitro flattened cells. We developed an optimal model...

["Bioinformatics","Cell Biology","Computational Biology","Marine Biology"]
doi:10.7287/peerj.preprints.27258v1
140 downloads
387 views

Background. Copepods are the major secondary producers in the World Ocean. They represent an important link between phytoplankton, microzooplankton and higher trophic levels such as fish. They are an important source of food for many fish species, but also a significant...

["Marine Biology","Biological Oceanography","Population Biology"]
doi:10.7287/peerj.preprints.26689v2
52 downloads
79 views

The salt marsh periwinkle, Littorina irrorata, exhibits a spatial refuge from predation by climbing the stems of Spartina alterniflora in order to avoid benthic predators. Salt marsh periwinkles have a broad geographic distribution, and for many species, responses...

["Ecology","Marine Biology"]
doi:10.7287/peerj.preprints.27160v1
41 downloads
75 views

The Bertalanffy-Pütter growth model describes mass m at age t by means of the differential equation dm/dt = p⋅ma−q⋅mb. The special case using the Bertalanffy exponent-pair a=2/3 and b=1 is most common (it corresponds to the von Bertalanffy growth function VBGF...

["Aquaculture, Fisheries and Fish Science","Computational Biology","Marine Biology","Mathematical Biology","Computational Science"]
doi:10.7287/peerj.preprints.27152v1
88 downloads
144 views

Background. Functional groups serve two important functions in ecology, they allow for simplification of ecosystem models and can aid in understanding diversity. Despite their important applications, there has not been a universally accepted method of how to define...

["Ecology","Marine Biology","Statistics","Data Mining and Machine Learning","Data Science"]
doi:10.7287/peerj.preprints.27148v1
105 downloads
209 views

Cu pollution in coastal areas is a worldwide threat for aquatic communities. This study assesses the effects of Cu exposure on microbial diversity, community structure and functions of microbial communities in marine periphyton biofilms at environmental relevant...

["Bioinformatics","Marine Biology","Microbiology","Molecular Biology","Ecotoxicology"]
doi:10.7287/peerj.preprints.27129v1
819 downloads
1,312 views
Christos D Arvanitidis, Richard M Warwick, Paul J Somerfield, Christina Pavloudi, Evangelos Pafilis, Anastassis Oulas, Giorgos Chatzigeorgiou, Vasilis Gerovasileiou, Theodoros Patkos, Nicolas Bailly, Francisco Hernandez, Bart Vanhoorne, Leen Vandepitte, Ward Appeltans, Robert Adlard, Peter Adriaens, Ahn Kee-Jeong, Ahyong Shane, Akkari Nesrine, Gary Anderson, Angel Martin, Claudia Arango, Tom Artois, Stephen Atkinson, Ruud Bank, Anthony D Barber, Joao P Barbosa, Ilse Bartsch, Denise Bellan-Santini, Jimmy Bernot, Rüdiger Bieler, Magda Błażewicz, Phil Bock, Ruth Böttger-Schnack, Philippe Bouchet, Nicole Boury-Esnault, Geoff Boxshall, Christopher B Boyko, Simone Nunes Brandão, Rod Bray, Niel L Bruce, Stephen Cairns, Tania N Campinas Bezerra, Paco Cárdenas, Benny KK Chan, Tin-Yam Chan, Lanna Cheng, Morgan Churchill, Laure Corbari, Ralf Cordeiro, Astrid Cornils, Keith A Crandall, Thomas Cribb, Jean-Loup D'hondt, Meg Daly, Mikhail Daneliya, Jean-Claude Dauvin, Peter Davie, Claude De Broyer, Valentin De Mazancourt, Nicole De Voogd, Peter Decker, Danielle Defaye, Henk Dijkstra, Martin Dohrmann, Daryl Domning, Rachel Downey, Inna Drapun, Ursula Eisendle-Flöckner, Christine Ewers-Saucedo, Marien Faber, Diego Figueroa, Julian Finn, Gustavo Fonseca, Ewan Fordyce, William Foster, Hidetaka Furuya, Horia Galea, Oscar Garcia-Alvarez, Rade Garic, Rebeca Gasca, Santiago Gaviria-Melo, Sarah Gerken, David Gibson, João Gil, Arjan Gittenberger, Chris Glasby, Serge Gofas, Samuel E Gómez-Noguera, David González-Solís, Dennis Gordon, Michal Grabowski, Cinzia Gravili, José M Guerra-García, Roberto Guidetti, Katja Guilini, Kerry A Hadfield, Ed Hendrycks, Bachiller Herrera, Ju-Shey Ho, Jens Høeg, Oleksandr Holovachov, Matthew D Hooge, John Hooper, Tammy Horton, Lauren Hughes, Matús Hyžný, Luiz IF Moretti, Tohru Iseto, Viatcheslav N Ivanenko, Gerhard Jarms, Damià Jaume, Krzysztof Jazdzewski, Ivana Karanovic, Young-Hyo Kim, Rachael King, Michelle Klautau, Jürgen Kolb, Alexey Kotov, Traudl Krapp-Schickel, Antonina Kremenetskaia, Reinhardt Kristensen, Andreas Kroh, Sven Kullander, Rafael La Perna, Sara LeCroy, Daniel Leduc, Rafael Lemaitre, Anne-Nina Lörz, Jim Lowry, Enrique Macpherson, Larry Madin, Tomasz Mamos, Renata Manconi, Bruce Marshall, David J Marshall, Patrick Martin, Sandra McInnes, Jan Mees, Tõnu Meidla, Kelly Merrin, Dmitry Miljutin, Claudia Mills, Vadim Mokievsky, Tina Molodtsova, Rich Mooi, André C Morandini, Rosana Moreira Da Rocha, Fabio Moretzsohn, Jonas Mortelmans, Jeanne Mortimer, Luigi Musco, Thomas A Neubauer, Eike Neubert, Peter NG Neuhaus, Anh D Nguyen, Claus Nielsen, Jon Norenburg, Tim O'Hara, Hisayo Okahashi, Dennis Opresko, Masayuki Osawa, Yuzo Ota, Gustav Paulay, Vincent Perrier, William Perrin, Iorgu Petrescu, Bernard Picton, John F Pilger, Andrzej Pisera, Dan Polhemus, Gary Poore, James D Reimer, Hans Reip, Michael Reuscher, Pilar Rios Lopez, Marc Rius, Alexander Rzhavsky, José Saiz-Salinas, André F Sartori, Heinrich Schatz, Bernd Schierwater, Andreas Schmidt-Rhaesa, Simon Schneider, Christine Schönberg, André R Senna, Cristiana Serejo, Shabuddin Shaik, Shokoofeh Shamsi, Jyotsna Sharma, Noa Shenkar, Andrew Shinn, Jacek Sicinski, Volker Siegel, Petra Sierwald, Elizabeth Simmons, Frederic Sinniger, Duncan Sivell, Boris Sket, Harry Smit, Nicole Smol, Jesser F Souza-Filho, Jörg Spelda, Sérgio N Stampar, Eric Stienen, Pavel Stoev, Sabine Stöhr, Malin Strand, Eduardo Suárez-Morales, Mindi Summers, Billie J Swalla, Stefano Taiti, Masaatsu Tanaka, Anne H Tandberg, Danny Tang, Mark Tasker, Harry ten Hove, Jan J ter Poorten, Jim Thomas, Erik V Thuesen, Ben Thuy, Juan T Timi, Antonio Todaro, Xavier Turon, Peter Uetz, Sergiy Utevsky, Jean Vacelet, Risto Väinölä, Sancia ET van der Meij, Ton van Haaren, Virág Venekey, Chris Vos, Genefor Walker-Smith, Chad T Walter, Les Watling, Matthew Wayland, Christopher Whipps, Gary Williams, Robin Wilson, Moriaki Yasuhara, Joana Zanol, Wolfgang Zeidler

Research Infrastructures (RIs) are facilities, resources and services used by the scientific community to conduct research and foster innovation. LifeWatch ERIC has developed various virtual research environments, which include many virtual laboratories (vLabs)...

["Biodiversity","Bioinformatics","Marine Biology","Taxonomy","Zoology"]
doi:10.7287/peerj.preprints.26819v2
46 downloads
119 views

Understanding trophodynamics of estuarine and marine ecosystems is important in developing food-web models prevalent in ecosystem-based approaches to fisheries management, as well as assessing ecosystem condition and function. Few studies have examined seasonal...

["Aquaculture, Fisheries and Fish Science","Biodiversity","Biogeography","Ecology","Marine Biology"]
doi:10.7287/peerj.preprints.27103v1
45 downloads
132 views

This study focused on the alterations that occur in larval molluscan cells during the induction or inhibition of apoptosis both in standard culture conditions and in response to cold injury during the induction of different death pathways. This is the first report...

["Cell Biology","Marine Biology","Molecular Biology"]
doi:10.7287/peerj.preprints.27100v1
193 downloads
497 views

Sequences and structural attributes of mitochondrial genomes have played a key role in the clarification of relationships among Cnidaria, a key phylum of early-diverging animals. Among the major lineages of Cnidaria, Ceriantharia ("tube anemones") remains one of...

["Bioinformatics","Evolutionary Studies","Marine Biology","Molecular Biology","Zoology"]
doi:10.7287/peerj.preprints.27042v1
146 downloads
245 views

Ocean acidification, the ongoing decline of surface ocean pH and [CO32-] due to absorption of surplus atmospheric CO2, has far-reaching consequences for marine biota, especially calcifiers. Among these are teleost fishes, which internally calcify otoliths, critical...

["Aquaculture, Fisheries and Fish Science","Marine Biology","Climate Change Biology"]
doi:10.7287/peerj.preprints.27040v1
220 downloads
568 views

In Japan, the subtropical Ryukyu Archipelago (RYS; also known as the Nansei Islands) with its coral reefs has been shown to harbor very high levels of marine biodiversity. This study provides an overview of the state of marine biodiversity research in the RYS....

["Biodiversity","Ecology","Marine Biology","Taxonomy"]
doi:10.7287/peerj.preprints.27029v1
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