Preprints (not yet peer-reviewed)

129 downloads
562 views

The ascomycete pathogen Sclerotinia sclerotiorum is a necrotrophic pathogen on over 400 known host plants, and is the causal agent of white mold on dry bean. Currently, there are no known cultivars of dry bean with complete resistance to white mold. For more than...

["Agricultural Science","Genetics","Mycology"]
doi:10.7287/peerj.preprints.3311v2
48 downloads
166 views

Although recent advances in molecular methods have facilitated understanding the evolution of fungal symbiosis, little is known about genomic and microbiome features of most uncultured symbiotic fungal clades. Here, we analysed the genome and microbiome of Inocybaceae...

["Biodiversity","Ecology","Genomics","Microbiology","Mycology"]
doi:10.7287/peerj.preprints.3408v1
35 downloads
114 views

Petriella setifera is poorly-known species with only fragmentary information in literature and with published partial genome about the fungal species. Therefore, the aim of the study was an analysis of the intraspecific genetic and functional diversity of new isolated...

["Agricultural Science","Ecology","Microbiology","Mycology"]
doi:10.7287/peerj.preprints.3353v1
75 downloads
334 views

In industry, the yeast Rhodotorula mucilaginosa is commonly used for the production of carotenoids. The production of carotenoids is important because they are used as natural colorants in food and some carotenoids are precursors of retinol (vitamin A). However,...

["Biotechnology","Genomics","Microbiology","Mycology","Plant Science"]
doi:10.7287/peerj.preprints.3219v2
35 downloads
312 views

There has been very little effort to incorporate foliar microbiomes into plant conservation efforts even though foliar endophytes are critically important to the fitness and function of hosts. Many critically endangered plants that have been extirpated from the...

["Conservation Biology","Microbiology","Mycology","Plant Science"]
doi:10.7287/peerj.preprints.3226v1
49 downloads
176 views

Members of the anaerobic gut fungi (AGF) reside in rumen, hindgut, and feces of ruminant and non-ruminant herbivorous mammals and reptilian herbivores. No protocols for gene insertion, deletion, silencing, or mutation are currently available for the AGF, rendering...

["Molecular Biology","Mycology"]
doi:10.7287/peerj.preprints.3177v1
61 downloads
232 views

Fungi and other eukaryotes represent one of the last frontiers of microbial diversity in the sponge holobiont. In this study we employed pyrosequencing of 18S ribosomal RNA gene amplicons containing the V7 and V8 hypervariable regions to explore the fungal diversity...

["Marine Biology","Microbiology","Mycology"]
doi:10.7287/peerj.preprints.3049v1
147 downloads
172 views

Emerging infectious diseases caused by fungal taxa are increasing and are placing a substantial burden on economies and ecosystems worldwide. Of the emerging fungal diseases, chytridomycosis caused by the fungus Batrachochytrium dendrobatidis (hereafter Bd) is...

["Ecology","Microbiology","Mycology","Computational Science"]
doi:10.7287/peerj.preprints.3017v1
55 downloads
261 views

Background. Species identification is essential for controlling disease, understanding epidemiology, and to guide the implementation of phytosanitary measures against fungi from the genus Diaporthe. Accurate Diaporthe species separation requires using multi-loci...

["Microbiology","Molecular Biology","Mycology"]
doi:10.7287/peerj.preprints.2822v1
41 downloads
267 views

Culture collections (CCs) manage fundamental data about preserved microorganisms. To enable the exploitation of these resources requires standardized, and simplified, access to the associated information. To this end, a European Microbial Resource Research Infrastructure,...

["Biodiversity","Bioinformatics","Microbiology","Mycology","Taxonomy"]
doi:10.7287/peerj.preprints.2815v1
60 downloads
535 views

Background. Opsin proteins are seven transmembrane receptor proteins which detect light. Opsins can be classified into two types and share little sequence identity: type 1, typically found in bacteria, and type 2, primarily characterized in metazoa. The type 2...

["Bioinformatics","Computational Biology","Evolutionary Studies","Genomics","Mycology"]
doi:10.7287/peerj.preprints.2397v2
55 downloads
350 views

Dispersal events between habitat patches in a landscape mosaic can structure ecological communities and influence the functioning of agrosystems. Here we investigated whether short-distance dispersal events between vineyard and forest patches shape foliar fungal...

["Agricultural Science","Ecology","Microbiology","Mycology","Plant Science"]
doi:10.7287/peerj.preprints.2458v1
112 downloads
331 views

Recent meta-analyses of plant responses to biochar boast positive average effects of between 10 and 40 %. Plant responses, however, vary greatly across systems, and null or negative biochar effects are increasingly reported. The mechanisms responsible for such...

["Agricultural Science","Environmental Sciences","Mycology","Plant Science"]
doi:10.7287/peerj.preprints.2123v1
117 downloads
594 views

Development of tools to identify species, genotypes, or novel strains of invasive organisms is critical for monitoring emergence and implementing rapid response measures. Molecular markers, although critical to identifying species or genotypes, require bioinformatic...

["Agricultural Science","Bioinformatics","Microbiology","Mycology","Taxonomy"]
doi:10.7287/peerj.preprints.2005v1
704 downloads
372 views

Extremophiles are considered a cornucopian source of chemically diverse and often novel metabolites. Determination of their growth and distribution pattern and their chemical nature is therefore vital to fully gauge their existential uniqueness and potential as...

["Biodiversity","Microbiology","Mycology"]
doi:10.7287/peerj.preprints.1914v1
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