Preprints (not yet peer-reviewed)

3 downloads
29 views

Plant defensins are known for different biological functions such as insect resistance, antibacterial, antifungal and antiviral activities. The role of plant defensins against weevils is based on inhibitor of alpha-amylase activity in weevil gut, therefore, weevils...

["Agricultural Science","Biotechnology","Genetics","Plant Science"]
doi:10.7287/peerj.preprints.3264v1
4 downloads
60 views

Populations of passively dispersed organisms in continental aquatic habitats typically show high levels of neutral genetic differentiation, despite their high dispersal capabilities. Several evolutionary factors, including founder events and local adaptation, and...

["Ecology","Evolutionary Studies","Genetics","Freshwater Biology"]
doi:10.7287/peerj.preprints.3254v1
11 downloads
84 views

Background: India is one of the mega biodiverse countries with a large number of endemic freshwater fishes. Recently, species of genus Horaglanis (family: Clariidae) have been reported from the southern part of India. Due to their unique morphological adaptations,...

["Aquaculture, Fisheries and Fish Science","Evolutionary Studies","Genetics","Taxonomy"]
doi:10.7287/peerj.preprints.3251v1
130 downloads
489 views

Olympia oysters are the only oyster native to the west coast of North America. The population within Puget Sound, WA has been decreasing significantly since the early 1900’s. Current restoration efforts are focused on supplementing local populations with hatchery...

["Aquaculture, Fisheries and Fish Science","Genetics"]
doi:10.7287/peerj.preprints.1595v3
9 downloads
96 views

Computational biology is rapidly advancing thanks to the many new tools developed and published each month. A systematic benchmarking practice would help biomedical researchers leverage this technological expansion to optimize their projects. Several aspects of...

["Computational Biology","Genetics","Genomics","Computational Science"]
doi:10.7287/peerj.preprints.3236v1
13 downloads
190 views

Epigenetic research focuses on understanding non-inheritable factors influencing gene regulation and covers various cellular mechanisms such as DNA methylation, histone modification, miRNA function and transcription factor binding sites. Recent advances in high-throughput...

["Bioinformatics","Computational Biology","Genetics","Molecular Biology","Data Mining and Machine Learning"]
doi:10.7287/peerj.preprints.3224v1
12 downloads
89 views

Models and the process of modeling are fundamental to the discipline of biology, and therefore should be incorporated into undergraduate biology courses. In this essay, we draw upon the literature and our own teaching experiences to provide practical suggestions...

["Evolutionary Studies","Genetics","Mathematical Biology","Science and Medical Education"]
doi:10.7287/peerj.preprints.3215v1
266 downloads
157 views

Emerging genomic technologies are reshaping the field of molecular ecology. However, many modern genomic approaches (e.g., RAD-seq) require large amounts of high quality template DNA. This poses a problem for an active branch of conservation biology: genetic monitoring...

["Conservation Biology","Ecology","Genetics","Genomics","Zoology"]
doi:10.7287/peerj.preprints.3209v1
51 downloads
158 views

The USA National Center for Biotechnology Information (NCBI) is one of the world’s most important sources of biological information. NCBI databases like PubMed and GenBank contain millions of records describing bibliographic, genetic, genomic, and medical data....

["Bioinformatics","Genetics","Genomics","Molecular Biology","Data Mining and Machine Learning"]
doi:10.7287/peerj.preprints.3179v2
9 downloads
116 views

Integrating genomic information into cattle breeding is an important approach to exploring the molecular mechanism for complex traits related to diary and meat production. To assist with genomic-based selection, a reference map of interactome is needed to fully...

["Agricultural Science","Genetics","Genomics"]
doi:10.7287/peerj.preprints.3178v1
28 downloads
152 views

A growing number of T2/S-RNases are being discovered in plant genomes. Members of this protein family have a variety of known functions, but the vast majority are still uncharacterized. We present data and analyses of phylogenetic relationships among T2/S-RNases,...

["Evolutionary Studies","Genetics","Genomics","Molecular Biology","Plant Science"]
doi:10.7287/peerj.preprints.3171v1
75 downloads
429 views

Premise of the Study. The internal transcribed spacer (ITS) region is situated between 18S and 26S in a polycistronic rRNA precursor transcript. It had been proved to be the most commonly sequenced region across plant species to resolve phylogenetic relationships...

["Biodiversity","Conservation Biology","Evolutionary Studies","Genetics","Plant Science"]
doi:10.7287/peerj.preprints.2434v2
20 downloads
100 views

Crape myrtle is an important ornamental woody plant, due to its long-lasting mid summer bloom and rich color . However, limited molecular markers on this species hinder the breeding and genetic studies. In this work, 8,652 EST-SSRs were identified from crape myrtle...

["Genetics","Plant Science"]
doi:10.7287/peerj.preprints.3141v1
39 downloads
137 views

We report here the successful assembly of the complete mitochondrial genomes of the northern spotted owl (Strix occidentalis caurina) and the barred owl (S. varia). We utilized sequence data from two sequencing methodologies, Illumina paired-end sequence data with...

["Genetics","Genomics","Molecular Biology","Zoology"]
doi:10.7287/peerj.preprints.3120v1
26 downloads
157 views

Hormones play an important role in the regulation of physiological, developmental and behavioural processes. Many of these mechanisms in insects, however, are still not well understood. One way to investigate hormonal regulation is to analyse gene expression patterns...

["Entomology","Genetics","Molecular Biology"]
doi:10.7287/peerj.preprints.3104v1
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