Peer-reviewed Articles

67 downloads
364 views

Ornithogalum mosaic virus (OrMV) has a wide host range and affects the production of a variety of ornamentals. In this study, the coat protein (CP) gene of OrMVwas used to investigate the molecular mechanisms underlying the evolution of this virus. The 36 OrMV...

["Agricultural Science","Evolutionary Studies","Microbiology","Virology","Population Biology"]
doi:10.7717/peerj.4550
101 downloads
601 views

Current research posits that all multicellular organisms live in symbioses with associated microorganisms and form so-called metaorganisms or holobionts. Cnidarian metaorganisms are of specific interest given that stony corals provide the foundation of the globally...

["Bioinformatics","Genomics","Virology","Biosphere Interactions"]
doi:10.7717/peerj.4449
97 downloads
1,275 views

Chelonid alphaherpesvirus 5 (ChHV5) is a herpesvirus associated with fibropapillomatosis (FP) in sea turtles worldwide. Single-locus typing has previously shown differentiation between Atlantic and Pacific strains of this virus, with low variation within each geographic...

["Genomics","Marine Biology","Virology"]
doi:10.7717/peerj.4386
147 downloads
861 views

Zika virus (ZIKV) is a vector-borne flavivirus that has caused recent outbreaks associated with serious disease in infants and newborns in the Americas. Aedes mosquitoes are the primary vectors for ZIKV, but little is known about the diversity of mosquitoes that...

["Entomology","Parasitology","Virology","Infectious Diseases","Public Health"]
doi:10.7717/peerj.4324
123 downloads
497 views

With the emergence of Next Generation Sequencing, major advances were made with regard to identifying viruses in natural environments. However, bioinformatical research on viruses is still limited because of the low amounts of viral DNA that can be obtained for...

["Biodiversity","Genomics","Microbiology","Virology"]
doi:10.7717/peerj.4351
305 downloads
2,040 views

With the increase in the availability of metagenomic data generated by next generation sequencing, there is an urgent need for fast and accurate tools for identifying viruses in host-associated and environmental samples. In this paper, we developed a stand-alone...

["Bioinformatics","Genomics","Microbiology","Virology"]
doi:10.7717/peerj.4227
171 downloads
1,133 views

Background Avian influenza virus (AIV) infections occur naturally in wild bird populations and can cross the wildlife-domestic animal interface, often with devastating impacts on commercial poultry. Migratory waterfowl and shorebirds are natural AIV reservoirs...

["Ecology","Veterinary Medicine","Virology"]
doi:10.7717/peerj.4060
2 citations
199 downloads
965 views

Stony corals (Scleractinia) are marine invertebrates that form the foundation and framework upon which tropical reefs are built. The coral animal associates with a diverse microbiome comprised of dinoflagellate algae and other protists, bacteria, archaea, fungi...

["Genomics","Marine Biology","Microbiology","Molecular Biology","Virology"]
doi:10.7717/peerj.4054
141 downloads
596 views

Background Dengue disease is a leading cause of illness and death in the tropics and subtropics. Most severe cases occur among patients secondarily infected with a different dengue virus (DENV) serotype compared with that from the first infection, resulting in...

["Biotechnology","Molecular Biology","Virology","Infectious Diseases"]
doi:10.7717/peerj.4021
1 citation
137 downloads
742 views

The core antigen of the hepatitis C virus (HCV Ag) presents an alternative marker to HCV RNA when screening patients for HCV viremia. This study sought to evaluate the utility of HCV Ag as a marker to assess active HCV infection in individuals residing in an HCV-endemic...

["Molecular Biology","Virology","Epidemiology","Gastroenterology and Hepatology"]
doi:10.7717/peerj.4008
117 downloads
530 views

Respiratory syncytial virus (RSV) causes acute lower respiratory tract infection in infants and young children worldwide. To investigate the RSV burden in Thailand over four consecutive years (January 2012 to December 2015), we screened 3,306 samples obtained from...

["Virology","Infectious Diseases"]
doi:10.7717/peerj.3970
280 downloads
833 views

Human papillomavirus (HPV) is the leading cause of cervical cancer. Urine-based HPV testing offers a simple and non-invasive method because of its increasing acceptance. A total of 164 pairs of cervical swab and urine samples from Thai women who underwent cervical...

["Infectious Diseases","Oncology","Virology","Women's Health"]
doi:10.7717/peerj.3910
1 citation
109 downloads
551 views

Background Enteroviruses are small non-enveloped viruses with a (+) ssRNA genome with one open reading frame. Enterovirus protein 3C (or 3CD for some species) binds the replicative element oriL to initiate replication. The replication of enteroviruses features...

["Evolutionary Studies","Genomics","Virology"]
doi:10.7717/peerj.3896
2 citations
243 downloads
866 views

Nodaviruses are small bipartite RNA viruses which belong to the family of Nodaviridae. They are categorized into alpha-nodavirus, which infects insects, and beta-nodavirus, which infects fishes. Another distinct group of nodavirus infects shrimps and prawns, which...

["Aquaculture, Fisheries and Fish Science","Virology","Immunology"]
doi:10.7717/peerj.3841
111 downloads
616 views

Circular rep-encoding ssDNA (CRESS-DNA) viruses are common constituents of invertebrate viral consortia. Despite their ubiquity and sequence diversity, the effects of CRESS-DNA viruses on invertebrate biology and ecology remain largely unknown. This study assessed...

["Ecology","Genomics","Microbiology","Virology","Freshwater Biology"]
doi:10.7717/peerj.3810

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