Peer-reviewed Articles

33 downloads
227 views

Modern genome sequencing strategies are highly sensitive to contamination making the detection of foreign DNA sequences an important part of analysis pipelines. Here we use Taxoblast, a simple pipeline with a graphical user interface, for the post-assembly detection...

["Bioinformatics","Genomics","Plant Science"]
doi:10.7717/peerj.4073
23 downloads
291 views

Ginsenoside Rk1 (G-Rk1) is a unique component created by processing the ginseng plant (mainly Sung Ginseng (SG)) at high temperatures. The aim of our study was to systematically review the pharmacological effects of G-Rk1. We utilized and manually searched eight...

["Plant Science","Evidence Based Medicine","Pharmacology"]
doi:10.7717/peerj.3993
24 downloads
118 views

Membrane-bound transcription factors (MTFs) are located in cellular membranes due to their transmembrane domains. In plants, proteolytic processing is considered to be the main mechanism for MTF activation, which ensures the liberation of MTFs from membranes and...

["Plant Science"]
doi:10.7717/peerj.4051
74 downloads
670 views

The canopy-forming, intertidal brown (Phaeophyceae) seaweed Fucus guiryi is distributed along the cold-temperate and warm-temperate coasts of Europe and North Africa. Curiously, an isolated population develops at Punta Calaburras (Alboran Sea, Western Mediterranean)...

["Ecology","Marine Biology","Plant Science"]
doi:10.7717/peerj.4048
47 downloads
294 views

In industry, the yeast Rhodotorula mucilaginosa is commonly used for the production of carotenoids. The production of carotenoids is important because they are used as natural colorants in food and some carotenoids are precursors of retinol (vitamin A). However,...

["Biotechnology","Genomics","Microbiology","Mycology","Plant Science"]
doi:10.7717/peerj.4030
70 downloads
444 views

There has been very little effort to incorporate foliar microbiomes into plant conservation efforts even though foliar endophytes are critically important to the fitness and function of hosts. Many critically endangered plants that have been extirpated from the...

["Conservation Biology","Microbiology","Mycology","Plant Science"]
doi:10.7717/peerj.4020
54 downloads
254 views

The herbal medicinal genus Aconitum L., belonging to the Ranunculaceae family, represents the earliest diverging lineage within the eudicots. It currently comprises of two subgenera, A. subgenus Lycoctonum and A. subg. Aconitum. The complete chloroplast (cp) genome...

["Biodiversity","Evolutionary Studies","Genomics","Plant Science"]
doi:10.7717/peerj.4018
58 downloads
302 views

Background Deficiency of available forms of phosphorus is common in most soils and causes reduction of crop plants growth and yield. Recently, model plants responses to phosphate (Pi) deficiency have been intensively studied. However, acclimation mechanisms of...

["Agricultural Science","Biochemistry","Environmental Sciences","Plant Science","Soil Science"]
doi:10.7717/peerj.3989
54 downloads
288 views

Plant type III polyketide synthase (PKS) can catalyse the formation of a series of secondary metabolites with different structures and different biological functions; the enzyme plays an important role in plant growth, development and resistance to stress. At present,...

["Agricultural Science","Bioinformatics","Genomics","Plant Science"]
doi:10.7717/peerj.3974
48 downloads
238 views

Copper plays key roles in plant physiological activities. To maintain copper cellular homeostasis, copper chaperones have important functions in binding and transporting copper to target proteins. Detailed characterization and function analysis of a copper chaperone,...

["Bioinformatics","Molecular Biology","Plant Science"]
doi:10.7717/peerj.3962
61 downloads
242 views

Limiting the juvenile phase and reducing tree size are the two main challenges for breeders to improve most fruit crops. Early maturation and dwarf cultivars have been reported for many fruit species. “Early mature” and low vigor walnut genotypes were found among...

["Agricultural Science","Biodiversity","Molecular Biology","Plant Science"]
doi:10.7717/peerj.3834
60 downloads
208 views

Background The red gum lerp psyllid, Glycaspis brimblecombei Moore (Hemiptera: Psyllidae), an eucalypt insect pest from Australia, was reported in Brazil in 2003. This study evaluated damage patterns of this pest on Eucalyptus camaldulensis Dehn (Myrtaceae) and...

["Agricultural Science","Entomology","Plant Science"]
doi:10.7717/peerj.3864
82 downloads
474 views

Background A number of biotic and abiotic factors have been proposed as drivers of geographic variation in species richness. As biotic elements, inter-specific interactions are the most widely recognized. Among abiotic factors, in particular for plants, climate...

["Biodiversity","Biogeography","Ecology","Environmental Sciences","Plant Science"]
doi:10.7717/peerj.3932
91 downloads
419 views

Plant resistance against insect herbivory has greatly focused on antibiosis, whereby the plant has a deleterious effect on the herbivore, and antixenosis, whereby the plant is able to direct the herbivore away from it. Although these two types of resistance may...

["Agricultural Science","Entomology","Plant Science"]
doi:10.7717/peerj.3934
146 downloads
544 views

Compared with other members of the family Rosaceae, the chloroplast genomes of Fragaria species exhibit low variation, and this situation has limited phylogenetic analyses; thus, complete chloroplast genome sequencing of Fragaria species is needed. In this study,...

["Evolutionary Studies","Genomics","Molecular Biology","Plant Science"]
doi:10.7717/peerj.3919

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