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Comparison of BCM with PLINK (logistic regression)

How do the methods compare in term of computational performance?

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BCM PLINK GWAS
Fabien Campagne • 1,155
• 9 Dec 2013 8:20am
waiting for moderation
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Cross-validation to measure predicted pairs

Experimental design: The study uses the complete dataset to derive SNPs previously known to be associated with LOAD. Could a cross-validation evaluation be considered to measure how well the predicted pairs predict on independent test sets?

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SNPs GWAS Late-Onset Alzheimer’s Disease
Fabien Campagne • 1,155
• 9 Dec 2013 8:18am
waiting for moderation