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Supplemental_Methods

Hello, thanks for your help. I am trying to replicate the protocol to augment Trinity assembly with Tophat1-Cufflinks assembly. In some step, I need to execute the extractfastasubsequence.sh script, which I don't have. It is possible to use any other program for subsequence extraction, or this script does something specific? I tried to use other programs, but I don't get the right results. Where can I get this script?

Again, thank you very much for your help.

Regards,

Germán Burguener.

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german, i can send you the scripts. can you send me a email to binay@ganitlabs.in? thank you. binay

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