Bacteria as “ink” for writing the initials of names on agar

Department of Chemical and Biomolecular Engineering, National University of Singapore, Singapore, Singapore
Novena, Singapore, Singapore
DOI
10.7287/peerj.preprints.349v5
Subject Areas
Biochemistry, Cell Biology, Microbiology, Molecular Biology, Science and Medical Education
Keywords
surface patterning, violacein, Chromobacterium violaceum, swarming motility, solid medium, cell spreading, pigment diffusivity, education research, color contrast, synthetic biology
Copyright
© 2017 Ng
Licence
This is an open access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, reproduction and adaptation in any medium and for any purpose provided that it is properly attributed. For attribution, the original author(s), title, publication source (PeerJ Preprints) and either DOI or URL of the article must be cited.
Cite this article
Ng W. 2017. Bacteria as “ink” for writing the initials of names on agar. PeerJ Preprints 5:e349v5

Abstract

Microbes, while living in close proximity in biofilms, may in other cases not be closely localized in the environment. In the latter case, their interactions and communications are dependent on myriad factors such as existence of direct connections (e.g., web of hyphae from fungi) or pools of water where they could migrate. Hence, disparate groups of microbes could subsist on nutrients in their local microhabitat while maintaining weak communication links and metabolic exchanges with groups farther afield. But, how do we probe such distance dependent communications links between groups of microbes of the same or different species in the laboratory? Using a purple pigment producing bacterium as “ink” for writing on agar, a surface patterning technique was demonstrated to be a simple and relatively low cost tool for testing the feasibility of research ideas; for example, depositing cells in both straight and curvilinear lines on planar substrates, which may find use in understanding possible interactions between different microbial species.Although a coarse surface patterning technique compared to more refined robot assisted patterning methods, simple spread plate deposition of different microbial species, in defined patterns, on separate areas of the agar surface, constituted a useful way forward in allowing us to delve deeper into the realmof understanding microbial interactions such as those in spatially resolved synthetic microbial community. Taking into account bacterial motility patterns, pigment diffusivity, and contrast of pigment with agar background color, inscription of patterns of bacterial cells through spread plate technique is an affordablemethod for lending a lens to spatially defined microbial interactions for microbial brethren unable to undergo migration on the agar surface. A synopsis of the work can be found in the accompanying PDF file, while the original article, “Bacterial calligraphy: A Memento for Undergraduate Research Students”, isavailable in the Journal of Microbiology and Biology Education, Vol. 13, No. 2, pp. 172-174, as an open access article. URL: http://www.asmscience.org/content/journal/jmbe/10.1128/jmbe.v13i2.414

Author Comment

This version updates the presentation of the utility of a coarse surface patterning technique on agar with bacterial cells secreting a purple pigment as “ink”. Language and syntax were improved.