Horizontally transferred genes in the ctenophore Mnemiopsis leidyi

Whitney Laboratory for Marine Bioscience, St. Augustine, Florida, United States
Department of Biology, University of Florida, Gainesville, FL, United States
DOI
10.7287/peerj.preprints.3462v3
Subject Areas
Evolutionary Studies, Genomics
Keywords
evolution, lateral gene transfer, hypothesis testing, phylogenetics
Copyright
© 2018 Hernandez et al.
Licence
This is an open access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, reproduction and adaptation in any medium and for any purpose provided that it is properly attributed. For attribution, the original author(s), title, publication source (PeerJ Preprints) and either DOI or URL of the article must be cited.
Cite this article
Hernandez AM, Ryan JF. 2018. Horizontally transferred genes in the ctenophore Mnemiopsis leidyi. PeerJ Preprints 6:e3462v3

Abstract

Horizontal gene transfer has had major impacts on the biology of a wide range of organisms from antibiotic resistance in bacteria to adaptations to herbivory in arthropods. A growing body of literature shows that horizontal gene transfer (HGT) between non-animals and animals is more commonplace than previously thought. In this study, we present a thorough investigation of HGT in the ctenophore Mnemiopsis leidyi. We applied tests of phylogenetic incongruence to identify nine genes that were likely transferred horizontally early in ctenophore evolution from bacteria and non-metazoan eukaryotes. All but one of these HGTs (an uncharacterized protein) are homologous to characterized enzymes, supporting previous observations that genes encoding enzymes are more likely to be retained after HGT events. We found that the majority of these nine horizontally transferred genes were expressed during development, suggesting that they are active and play a role in the biology of M. leidyi. This is the first report of HGT in ctenophores, and contributes to an ever-growing literature on the prevalence of genetic information flowing between non-animals and animals.

Author Comment

This version of the preprint has undergone revisions and has been accepted for publication by PeerJ.

Supplemental Information

Supplementary text containing all command lines, parameters, and version numbers of programs

DOI: 10.7287/peerj.preprints.3462v3/supp-1