Integrating ecology and epidemiology using individual-based multi-species networks

Mitrani Department of Desert Ecology, Jacob Blaustein Institutes for Desert Research, Ben-Gurion University of the Negev, Midreshet Ben-Gurion, Israel
Institut des Sciences de l'Évolution, Université Montpellier 2, Montpellier, France
Department of Evolutionary Anthropology, Duke University, Durham, USA
Duke Global Health Institute, Duke University, Durham, USA
DOI
10.7287/peerj.preprints.307v1
Subject Areas
Computational Biology, Ecology, Epidemiology
Keywords
networks, ecology, epidemiology, diseae, host-parasite interactions, individual traits
Copyright
© 2014 Pilosof et al.
Licence
This is an open access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, reproduction and adaptation in any medium and for any purpose provided that it is properly attributed. For attribution, the original author(s), title, publication source (PeerJ PrePrints) and either DOI or URL of the article must be cited.
Cite this article
Pilosof S, Morand S, Krasnov BR, Nunn CL. 2014. Integrating ecology and epidemiology using individual-based multi-species networks. PeerJ PrePrints 2:e307v1

Abstract

Parasite transmission in host communities is a function of ecological factors that influence interspecific contacts and contact patterns within species. These two levels are studied with different kinds of networks – ecological networks and individual contact networks – and the integration of these levels is essential for effective understanding of parasite transmission. We combined these approaches by creating epidemiological networks based on parasite sharing from individual-based ecological host-parasite networks. We compared multi- to single-species networks to investigate the drivers of helminth infection in wild individual rodents of South-east Asia. Network modularity was higher in the multi-species than in the single-species networks. Phylogeny affected affiliation of individuals to modules. The importance of individuals differed between multi- and single-species networks, with species identity and individual traits influencing their position in the networks. Simulations revealed that a novel parasite spreads more slowly in multi- than in single-species networks and that this depended on network structure. Although the relative contribution of within- vs. between-species transmission rates to disease dynamics is important, using multi-host epidemiological networks improves our understanding of parasite dynamics as it further considers interaction structure between individuals.