Optimizing pedigrees: Using a biasing system to determine likely inheritance systems

Department of Biology, University of California, San Diego, San Diego, California, United States
DOI
10.7287/peerj.preprints.2871v3
Subject Areas
Bioinformatics, Genetics, Mathematical Biology, Statistics
Keywords
Pedigree, Chi-Squared, Biasing System, Inheritance, Statistics, Algorithm
Copyright
© 2017 Ang
Licence
This is an open access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, reproduction and adaptation in any medium and for any purpose provided that it is properly attributed. For attribution, the original author(s), title, publication source (PeerJ Preprints) and either DOI or URL of the article must be cited.
Cite this article
Ang J. 2017. Optimizing pedigrees: Using a biasing system to determine likely inheritance systems. PeerJ Preprints 5:e2871v3

Abstract

Pedigrees, though straightforward and versatile, lack the ability to tell us information about many individuals. Though numerical systems have been developed, there has yet to be a system that tells us the probabilities of a pedigree following certain inheritance systems. My system intends to do that by creating a flexible numerical system, which can then be tested for variance. In order to do so, my system attempts to adapt inheritance system to known pedigree data. Then, it calculates the difference between the calculated values and the known pedigree data. It aggregates these values, then it uses a chi-squared analysis in order to determine how likely said inheritance system is to match the pedigree. This is done for many different systems, until we have a general idea of which systems are probable and which are not.

Author Comment

Added grammar fixes and elaborated the introduction.

Supplemental Information

Full Explanation of Biasing Systems

DOI: 10.7287/peerj.preprints.2871v3/supp-1