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A novel computational approach to the silencing of Sugarcane Bacilliform Guadeloupe A Virus determines potential host-derived MicroRNAs in sugarcane (Saccharum officinarum L.)

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RT @Xenpaper: A novel computational approach to the silencing of Sugarcane Bacilliform Guadeloupe A Virus determines potential host-derived…
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A novel computational approach to the silencing of Sugarcane Bacilliform Guadeloupe A Virus determines potential host-derived MicroRNAs in sugarcane (Saccharum officinarum L.) https://t.co/KCgVN3Lx5T https://t.co/mtyNLeiiEo
A novel computational approach to the silencing of Sugarcane Bacilliform Guadeloupe A Virus determines potential host-derived MicroRNAs in sugarcane (Saccharum officinarum L.) https://t.co/xSN4ykz3Zl Sugarcane Bacilliform Guadeloupe A Virus (SCBGAV, genus Badnavirus, f…
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Supplemental Information

Computational prediction of Sugarcane-encoded MicroRNAs in the Genome of SCBGAV

Computational prediction of Sugarcane-encoded MicroRNAs in the Genome of SCBGAV using all algorithms.

DOI: 10.7287/peerj.preprints.27842v1/supp-1

SCBGAV Gene position table.1

Sugarcane-encoded miRNA target sites locus position in each gene of SCBGAV.

DOI: 10.7287/peerj.preprints.27842v1/supp-2

Identification of Common miRNAs

Consensus Sugarcane-encoded miRNA were selected by all algorithms.

DOI: 10.7287/peerj.preprints.27842v1/supp-3

Sugarcane-encoded miRNAs in the SCBGAV genome

Sugarcane-encoded miRNAs with SCBGAV genomic positions predicted by all algorithms.

DOI: 10.7287/peerj.preprints.27842v1/supp-4

Additional Information

Competing Interests

The authors declare that they have no competing interests.

Author Contributions

Fakiha Ashraf performed the experiments, analyzed the data, prepared figures and/or tables, approved the final draft.

Muhammad Aleem Ashraf conceived and designed the experiments, performed the experiments, analyzed the data, contributed reagents/materials/analysis tools, prepared figures and/or tables, authored or reviewed drafts of the paper, approved the final draft.

Xiaowen Hu performed the experiments, analyzed the data, contributed reagents/materials/analysis tools, prepared figures and/or tables, approved the final draft.

Shuzhen Zhang conceived and designed the experiments, contributed reagents/materials/analysis tools, authored or reviewed drafts of the paper, approved the final draft.

Funding

This study is supported by the National Natural Science Foundation of China (No.31771865), the Sugar Crop Research System (CARS-170301) and the “Talented Young Scientist Program” (TYSP-4th Batch 2017-2018) of China Project ID (Pakistan-18-004). The funders had no role in study design, data collection and analysis, decision to publish, or preparation of the manuscript.


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