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Genomics of hosts-pathogen interactions: challenges and opportunities across ecological and spatiotemporal scales

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RT @ElinVidevall: We have a new perspective piece out as preprint: "Genomics of hosts-pathogen interactions: challenges and opportunities a…
RT @ElinVidevall: We have a new perspective piece out as preprint: "Genomics of hosts-pathogen interactions: challenges and opportunities a…
RT @ElinVidevall: We have a new perspective piece out as preprint: "Genomics of hosts-pathogen interactions: challenges and opportunities a…
RT @ElinVidevall: We have a new perspective piece out as preprint: "Genomics of hosts-pathogen interactions: challenges and opportunities a…
RT @ElinVidevall: We have a new perspective piece out as preprint: "Genomics of hosts-pathogen interactions: challenges and opportunities a…
RT @ElinVidevall: We have a new perspective piece out as preprint: "Genomics of hosts-pathogen interactions: challenges and opportunities a…
RT @ElinVidevall: We have a new perspective piece out as preprint: "Genomics of hosts-pathogen interactions: challenges and opportunities a…
RT @ElinVidevall: We have a new perspective piece out as preprint: "Genomics of hosts-pathogen interactions: challenges and opportunities a…
RT @ElinVidevall: We have a new perspective piece out as preprint: "Genomics of hosts-pathogen interactions: challenges and opportunities a…
RT @ElinVidevall: We have a new perspective piece out as preprint: "Genomics of hosts-pathogen interactions: challenges and opportunities a…
RT @ElinVidevall: We have a new perspective piece out as preprint: "Genomics of hosts-pathogen interactions: challenges and opportunities a…
RT @ElinVidevall: We have a new perspective piece out as preprint: "Genomics of hosts-pathogen interactions: challenges and opportunities a…
RT @ElinVidevall: We have a new perspective piece out as preprint: "Genomics of hosts-pathogen interactions: challenges and opportunities a…
RT @ElinVidevall: We have a new perspective piece out as preprint: "Genomics of hosts-pathogen interactions: challenges and opportunities a…
RT @ElinVidevall: We have a new perspective piece out as preprint: "Genomics of hosts-pathogen interactions: challenges and opportunities a…
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RT @ElinVidevall: We have a new perspective piece out as preprint: "Genomics of hosts-pathogen interactions: challenges and opportunities a…
3 days ago
RT @ElinVidevall: We have a new perspective piece out as preprint: "Genomics of hosts-pathogen interactions: challenges and opportunities a…
RT @ElinVidevall: We have a new perspective piece out as preprint: "Genomics of hosts-pathogen interactions: challenges and opportunities a…
3 days ago
RT @ElinVidevall: We have a new perspective piece out as preprint: "Genomics of hosts-pathogen interactions: challenges and opportunities a…
RT @ElinVidevall: We have a new perspective piece out as preprint: "Genomics of hosts-pathogen interactions: challenges and opportunities a…
RT @ElinVidevall: We have a new perspective piece out as preprint: "Genomics of hosts-pathogen interactions: challenges and opportunities a…
RT @ElinVidevall: We have a new perspective piece out as preprint: "Genomics of hosts-pathogen interactions: challenges and opportunities a…
RT @ElinVidevall: We have a new perspective piece out as preprint: "Genomics of hosts-pathogen interactions: challenges and opportunities a…
RT @ElinVidevall: We have a new perspective piece out as preprint: "Genomics of hosts-pathogen interactions: challenges and opportunities a…
RT @ElinVidevall: We have a new perspective piece out as preprint: "Genomics of hosts-pathogen interactions: challenges and opportunities a…
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Supplemental Information

SI Table 1: References and scoring results of literature survey

Literature search on Web of Science (accessed August 30, 2018) with the following search query: (host-parasite* OR host-pathogen*) AND (genomic*). We refined the search hits by document type to include only articles, covering the publication years 2014-2018, and excluding studies with no genomic aspect. The table contains 263 papers with scores for each scale defined in Table 1.

DOI: 10.7287/peerj.preprints.27734v1/supp-1

Additional Information

Competing Interests

Scott V. Edwards is an Academic Editor for PeerJ.

Author Contributions

Kathrin Näpflin performed the experiments, analyzed the data, prepared figures and/or tables, authored or reviewed drafts of the paper, approved the final draft.

Lutz Becks performed the experiments, authored or reviewed drafts of the paper, approved the final draft.

Staffan Bensch performed the experiments, authored or reviewed drafts of the paper, approved the final draft.

Vincenzo A Ellis performed the experiments, authored or reviewed drafts of the paper, approved the final draft.

Nina Hafer-Hahmann performed the experiments, authored or reviewed drafts of the paper, approved the final draft.

Karin C Harding performed the experiments, authored or reviewed drafts of the paper, approved the final draft.

Sara K Lindén performed the experiments, prepared figures and/or tables, authored or reviewed drafts of the paper, approved the final draft.

Emily A O'Connor performed the experiments, authored or reviewed drafts of the paper, approved the final draft.

Morten T Olsen performed the experiments, authored or reviewed drafts of the paper, approved the final draft.

Jacob Roved performed the experiments, authored or reviewed drafts of the paper, approved the final draft.

Timothy B Sackton performed the experiments, authored or reviewed drafts of the paper, approved the final draft.

Allison J Shultz performed the experiments, prepared figures and/or tables, authored or reviewed drafts of the paper, approved the final draft.

Vignesh Venkatakrishnan performed the experiments, authored or reviewed drafts of the paper, approved the final draft.

Elin Videvall performed the experiments, authored or reviewed drafts of the paper, approved the final draft.

Helena Westerdahl performed the experiments, authored or reviewed drafts of the paper, approved the final draft.

Jamie C Winternitz performed the experiments, authored or reviewed drafts of the paper, approved the final draft.

Scott V Edwards conceived and designed the experiments, performed the experiments, prepared figures and/or tables, authored or reviewed drafts of the paper, approved the final draft.

Data Deposition

The following information was supplied regarding data availability:

The scoring data and references for the literature survey can be found in Supplementary Information Table 1.

Funding

The themed activities of “Origins of Biodiversity”, of which our host-pathogen workshop was a part, were funded by Chalmers University of Technology and the University of Gothenburg. This work was supported by the Swedish Research Council Formas, the Swedish Research Council, the Alexander von Humboldt Foundation, Kungliga Fysiografiska Sällskapet i Lund, the Carl Tryggers Foundation (postdoctoral fellowship to VAE), and the Swiss National Science Foundation (postdoctoral fellowships nr.168911and 180862 to KN). No additional external funding was received for this study. The funders had no role in study design, data collection and analysis, decision to publish, or preparation of the manuscript.


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