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Comprehensive classification of the plant non-specific lipid transfer protein superfamily towards its Sequence – Structure – Function analysis.

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RT @Xenpaper: Comprehensive classification of the plant non-specific lipid transfer protein superfamily towards its Sequence – Structure –…
23 days ago
Comprehensive classification of the plant non-specific lipid transfer protein superfamily towards its Sequence – Structure – Function analysis. https://t.co/NgfUl70uAo https://t.co/YeJvHjJSA2
Multi-scale analysis of the nsLTP family - Le moins qu'on puisse dire c'est qu'avec @thePeerJ, ça va vite ! Soumis mercredi, en ligne vendredi https://t.co/6y6Zyzg7qT
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Additional Information

Competing Interests

The authors declare that they have no competing interests.

Author Contributions

Cecile Fleury conceived and designed the experiments, performed the experiments, analyzed the data, prepared figures and/or tables, authored or reviewed drafts of the paper, approved the final draft.

Jerome Gracy conceived and designed the experiments, analyzed the data, contributed reagents/materials/analysis tools, prepared figures and/or tables, authored or reviewed drafts of the paper, approved the final draft.

Marie-Francoise Gautier conceived and designed the experiments, performed the experiments, analyzed the data, authored or reviewed drafts of the paper, approved the final draft.

Jean-Luc Pons performed the experiments, contributed reagents/materials/analysis tools, approved the final draft, batch molecular modeling.

Jean-Francois Dufayard conceived and designed the experiments, analyzed the data, contributed reagents/materials/analysis tools, prepared figures and/or tables, authored or reviewed drafts of the paper, approved the final draft.

Gilles Labesse contributed reagents/materials/analysis tools, approved the final draft, model assessment.

Manuel Ruiz conceived and designed the experiments, approved the final draft, bibliographe updates.

Frederic de Lamotte conceived and designed the experiments, performed the experiments, analyzed the data, contributed reagents/materials/analysis tools, prepared figures and/or tables, authored or reviewed drafts of the paper, approved the final draft.

Data Deposition

The following information was supplied regarding data availability:

The code for the tool "InTreeGrate" is available on GitHub: https://github.com/SouthGreenPlatform/rap-green under license (GNU General Public License v3.0)

All the proteins models are available online: http://atome.cbs.cnrs.fr/AT2B/SERVER/LTP.html

A graphic interface allows exploring, selecting and downloading the models. Models are available under license Licence CC BY-NC 4.0

Funding

This work was supported by the French National Research Agency (ANR Genoplante) [grant ANR- 08-GENO118] and [ANR-10-BINF-03-04]. The funders had no role in study design, data collection and analysis, decision to publish, or preparation of the manuscript.


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