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Whole-genome comparisons of Penicillium spp. reveals secondary metabolic gene clusters and candidate genes associated with fungal aggressiveness during apple fruit decay

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92 days ago
Whole-genome comparisons of Penicillium spp. reveals secondary metabolic gene clusters and candidate genes associated with fungal aggressiveness during apple fruit decay https://t.co/NsiVUXts8U https://t.co/49NWKNFTI9
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Supplemental Information

Gene clusters in P. expansum (R19) and P. solitum (RS1)

Gene cluster identities in Penicillium expansum and P. solitum

DOI: 10.7287/peerj.preprints.27430v1/supp-1

Additional Information

Competing Interests

The authors declare that they have no competing interests.

Author Contributions

Guangxi Wu conceived and designed the experiments, performed the experiments, analyzed the data, contributed reagents/materials/analysis tools, prepared figures and/or tables, authored or reviewed drafts of the paper, approved the final draft.

Wayne M Jurick II conceived and designed the experiments, performed the experiments, analyzed the data, contributed reagents/materials/analysis tools, prepared figures and/or tables, authored or reviewed drafts of the paper, approved the final draft.

Franz J Lichtner conceived and designed the experiments, analyzed the data, contributed reagents/materials/analysis tools, prepared figures and/or tables, authored or reviewed drafts of the paper, approved the final draft.

Hui Peng performed the experiments, contributed reagents/materials/analysis tools, prepared figures and/or tables, approved the final draft.

Guohua Yin analyzed the data, contributed reagents/materials/analysis tools, prepared figures and/or tables, authored or reviewed drafts of the paper, approved the final draft.

Verneta L Gaskins performed the experiments, contributed reagents/materials/analysis tools, approved the final draft.

Yanbin Yin analyzed the data, contributed reagents/materials/analysis tools, approved the final draft.

Sui-Sheng Hua analyzed the data, contributed reagents/materials/analysis tools, approved the final draft.

Kari A. Peter contributed reagents/materials/analysis tools, approved the final draft.

Joan W Bennett analyzed the data, contributed reagents/materials/analysis tools, prepared figures and/or tables, authored or reviewed drafts of the paper, approved the final draft.

DNA Deposition

The following information was supplied regarding the deposition of DNA sequences:

The R19 genome sequence in its entirety is available online as BioSample SAMN02716838.

Data Deposition

The following information was supplied regarding data availability:

We have presented raw data as supplemental tables. Additional sequence data can be found in GenBank (SAMN02716838) and is publicly available.

The raw data is available as Supplemental Tables. Additional sequence data can be found in GenBank (SAMN02716838) and is publicly available.

Funding

This work was supported by base funds provided to USDA-ARS project plan #8042-42430-002-00D entitled “Development of Novel Tools to Manage Fungal Plant Pathogens that Cause Postharvest Decay of Pome Fruit to Reduce Food Waste” via National Program 303 Plant Diseases. The funders had no role in study design, data collection and analysis, decision to publish, or preparation of the manuscript.


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