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No budget mitogenomics: Assembling 14 new mitogenomes for the ant subfamily Pseudomyrmecinae from public data

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RT @phy_papers: PJpreprint: No budget mitogenomics: Assembling 14 new mitogenomes for the ant subfamily Pseudomyrmecinae from public data h…
RT @phy_papers: PJpreprint: No budget mitogenomics: Assembling 14 new mitogenomes for the ant subfamily Pseudomyrmecinae from public data h…
RT @phy_papers: PJpreprint: No budget mitogenomics: Assembling 14 new mitogenomes for the ant subfamily Pseudomyrmecinae from public data h…
603 days ago
PJpreprint: No budget mitogenomics: Assembling 14 new mitogenomes for the ant subfamily Pseudomyrmecinae from public data https://t.co/Gs1QsvafDA
603 days ago
No budget mitogenomics: Assembling 14 new mitogenomes for the ant subfamily Pseudomyrmecinae from public data https://t.co/2OyXRNTrVE
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Supplemental Information

Assembly coverage for all 14 Pseudomyrmecinae mitogenomes

DOI: 10.7287/peerj.preprints.27342v1/supp-1

Multifasta containing all 14 mitochondrial genome sequences assembled for Myrmecinae using public data

DOI: 10.7287/peerj.preprints.27342v1/supp-2

Information on the fourteen publicly available genomic datasets for Pseudomirmecinae ants downloaded from SRA database

DOI: 10.7287/peerj.preprints.27342v1/supp-3

Information on the fourteen publicly available genomic datasets for Pseudomirmecinae ants downloaded from SRA database

DOI: 10.7287/peerj.preprints.27342v1/supp-4

Accession number, species name and reference for all mitochondria used in phylogenetic trees

DOI: 10.7287/peerj.preprints.27342v1/supp-5

Direct links for download of the 14 Pseudomyrmecinae datasets used in this study to assemble complete mitochondrial genome sequences

DOI: 10.7287/peerj.preprints.27342v1/supp-6

Additional Information

Competing Interests

The authors declare that they have no competing interests.

Author Contributions

Gabriel A Vieira conceived and designed the experiments, performed the experiments, analyzed the data, contributed reagents/materials/analysis tools, prepared figures and/or tables, authored or reviewed drafts of the paper, approved the final draft.

Francisco Prosdocimi conceived and designed the experiments, performed the experiments, analyzed the data, contributed reagents/materials/analysis tools, prepared figures and/or tables, authored or reviewed drafts of the paper, approved the final draft.

DNA Deposition

The following information was supplied regarding the deposition of DNA sequences:

GenBank accession numbers BK010472 to BK010476 and BK010379 to BK010387 (not publicly available yet).

The complete sequence for all assembled mitogenomes as a multifasta file is provided in supplemental file S1.

Data Deposition

The following information was supplied regarding data availability:

The direct links for download of all 14 Pseudomyrmecinae genomic public datasets (in SRA file format) used for mitogenome assembly are provided in supplemental table S4.

Funding

This work was supported by CAPES and Fundação de Amparo a Pesquisa do Estado do Rio de Janeiro (FAPERJ) [grant numbers 202.810/2015 and 202.780/2018]. The funders had no role in study design, data collection and analysis, decision to publish, or preparation of the manuscript.


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