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Jonas Almeida
PeerJ Author
135 Points

Contributions by role

Author 100
Preprint Author 35

Contributions by subject area

Bioinformatics
Epidemiology
Public Health
Computational Science
Data Science

Jonas S Almeida

PeerJ Author

Summary

Since 2015 Jonas Almeida is Professor and Chief Technology Officer for Biomedical Informatics at Stony Brook University (State University of NY, Long Island). This followed 4 years as the inaugural director of a new Division in Informatics in the Dept of Pathology of the Univ Alabama at Birmingham (UAB), and 5 years as Professor of Bioinformatics in the Division of Applied Mathematics of the University of Texas MDAnderson Cancer Center (2005-2010). His current research interests are at the intersection of Computational Statistics and Cloud Computing for Bioinformatics application development in the Web Platform. This research pulls together threads from past work on mathematical modeling and machine learning for Medical Genomics, at a time when these fields are challenged by the increasingly data driven nature of modern Biomedical Research. This work is often pursued with public Biomedical Big Data resources such as The Cancer Genome Atlas (TCGA) as reference for Personalized Medicine applications. As Population Health data becomes available in real-time (see for example bit.ly/pqiSuffolk, /tcgascope or /loadsparcs), a new frontier opens for Machine Learning embedded as Web Computing in the increasingly patient-facing HealthIT enterprise.

Artificial Intelligence Bioinformatics Computational Science Data Science Epidemiology Mathematical Biology

Past or current institution affiliations

Medical University of South Carolina
State University of New York at Stony Brook
University of Alabama - Birmingham
University of Texas Health Center at Houston

Work details

Professor

State University of New York at Stony Brook
January 2015
Biomedical Informatics
Professor (tenured) and Chief Technology Officer

Associate Professor

Medical University of South Carolina
January 2001 - December 2004
Biostatistics

Professor

University of Texas Health Center at Houston
January 2005 - December 2010
MDAnderson Cancer Center, Dept of Bioinformatics

Professor, Informatics Division director

University of Alabama - Birmingham
January 2011 - December 2014
Pathology

Websites

  • GitHub
  • biosketch

PeerJ Contributions

  • Articles 1
  • Preprints 1
January 15, 2019
Serverless OpenHealth at data commons scale—traversing the 20 million patient records of New York’s SPARCS dataset in real-time
Jonas S. Almeida, Janos Hajagos, Joel Saltz, Mary Saltz
https://doi.org/10.7717/peerj.6230 PubMed 30671301
September 15, 2018 - Version: 1
Serverless OpenHealth at data commons scale - traversing the 20 million patient records of New York's SPARCS dataset in real-time
Jonas S Almeida, Janos Hajagos, Joel Saltz, Mary Saltz
https://doi.org/10.7287/peerj.preprints.27209v1