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Venomix: A simple bioinformatic pipeline for identifying and characterizing toxin gene candidates from transcriptomic data

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@anemonegoddess @thePeerJ https://t.co/iI1zochodk https://t.co/3AkGZSd9IX
RT @aida_verdes: Venomix: A simple bioinformatic pipeline for identifying and characterizing toxin gene candidates from transcriptomic data…
RT @aida_verdes: Venomix: A simple bioinformatic pipeline for identifying and characterizing toxin gene candidates from transcriptomic data…
RT @aida_verdes: Venomix: A simple bioinformatic pipeline for identifying and characterizing toxin gene candidates from transcriptomic data…
RT @aida_verdes: Venomix: A simple bioinformatic pipeline for identifying and characterizing toxin gene candidates from transcriptomic data…
RT @aida_verdes: Venomix: A simple bioinformatic pipeline for identifying and characterizing toxin gene candidates from transcriptomic data…
Venomix: A simple bioinformatic pipeline for identifying and characterizing toxin gene candidates from transcriptomic data by @Jason_Macrander @daly66 et al @PeerJPreprints https://t.co/6JHygKZbUt
269 days ago
Venomix: A simple bioinformatic pipeline for identifying and characterizing toxin gene candidates from transcriptomic data https://t.co/wNhcT9V5oz
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Supplemental Information

Supplemental Tables 1 and 2

NA

DOI: 10.7287/peerj.preprints.26733v1/supp-1

Venomix outputs for C. sponsalis used to write this manuscript

Venomix outputs for C. sponsalis used to write this manuscript.

DOI: 10.7287/peerj.preprints.26733v1/supp-2

Venomix outputs for E. coloratus used to write this manuscript

Venomix outputs for E. coloratus used to write this manuscript.

DOI: 10.7287/peerj.preprints.26733v1/supp-3

Venomix outputs for T. bicarinatum used to write this manuscript

Venomix outputs for T. bicarinatum used to write this manuscript.

DOI: 10.7287/peerj.preprints.26733v1/supp-4

Venomix outputs for original T. bicarinatum assembly used to write this manuscript

Venomix outputs for original T. bicarinatum assembly used to write this manuscript.

DOI: 10.7287/peerj.preprints.26733v1/supp-5

Venomix outputs for U. yaschenkoi used to write this manuscript

Venomix outputs for U. yaschenkoi used to write this manuscript.

DOI: 10.7287/peerj.preprints.26733v1/supp-6

Additional Information

Competing Interests

The authors declare that they have no competing interests.

Author Contributions

Jason Macrander conceived and designed the experiments, performed the experiments, analyzed the data, prepared figures and/or tables, authored or reviewed drafts of the paper, approved the final draft.

Jyothirmayi Panda conceived and designed the experiments, performed the experiments, approved the final draft.

Daniel Janies contributed reagents/materials/analysis tools, authored or reviewed drafts of the paper, approved the final draft.

Marymegan Daly conceived and designed the experiments, authored or reviewed drafts of the paper, approved the final draft.

Adam M Reitzel contributed reagents/materials/analysis tools, authored or reviewed drafts of the paper, approved the final draft.

Data Deposition

The following information was supplied regarding data availability:

Venomix Pipeline

https://bitbucket.org/JasonMacrander/venomix

Funding

Support for this project was provided by NSF DEB 1257796 to MD, NSF DEB 1536530 to MD and JM, and NSF OCE 1536530 to AMR. JP was supported by a research assistantship provided by the UNCC Graduate School at UNCC under the guidance of DJ. The funders had no role in study design, data collection and analysis, decision to publish, or preparation of the manuscript.


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