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Identification of microRNAs in the green and red sectors of Amaranthus tricolor L. leaves based on Illumina sequencing data

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Liu et al: Identification of microRNAs in the green and red sectors of Amaranthus tricolor L. leaves based on Illumina sequencing data https://t.co/ieLdHW1nx6 https://t.co/KXsz8jxf5Z
Identification of microRNAs in the green and red sectors of Amaranthus tricolor L. leaves based on Illumina sequencing data https://t.co/OcvBUXmvyv
Identification of microRNAs in the green and red sectors of Amaranthus tricolor L. leaves based on Illumina sequencing data https://t.co/LyYrNbfrtu Betalains are abundant in amaranth plants. Additionally, the betalain molecular structure and metabolic pathway differ fr…
Identification of microRNAs in the green and red sectors of Amaranthus tricolor L. leaves based on Illumina sequencing data https://t.co/25818GsEsT
221 days ago
Identification of microRNAs in the green and red sectors of Amaranthus tricolor L. leaves based on Illumina sequencing data https://t.co/2rTbSeghHd
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Supplemental Information

Supplementary Fig. 1 Length distribution of clean reads and unique reads

DOI: 10.7287/peerj.preprints.26723v1/supp-1

Supplementary Fig. 2 The length distributions of the miRNAs

DOI: 10.7287/peerj.preprints.26723v1/supp-2

Supplementary Fig3. miRNA nucleotide bias in amaranthus

DOI: 10.7287/peerj.preprints.26723v1/supp-3

Supplementary Fig4. COG function classification

DOI: 10.7287/peerj.preprints.26723v1/supp-4

Supplementary Fig5. KOG function classification

DOI: 10.7287/peerj.preprints.26723v1/supp-5

Supplementary Table S1 Identification of known and some novel mature miRNA sequences and analysis in A.tricolor

DOI: 10.7287/peerj.preprints.26723v1/supp-6

Supplementary Table S2 GO enrichment of target genes in amranthus

DOI: 10.7287/peerj.preprints.26723v1/supp-7

Additional Information

Competing Interests

The authors declare that they have no competing interests.

Author Contributions

Shengcai Liu conceived and designed the experiments, performed the experiments, prepared figures and/or tables, authored or reviewed drafts of the paper, approved the final draft, download references.

Liyun Peng performed the experiments, analyzed the data.

Junfei Pan performed the experiments, analyzed the data.

Xiao Wang contributed reagents/materials/analysis tools.

Chunli Zhao contributed reagents/materials/analysis tools.

Chunzhen Cheng analyzed the data.

Zihao Zhang contributed reagents/materials/analysis tools.

Yuling Lin contributed reagents/materials/analysis tools.

Xu XuHan conceived and designed the experiments, authored or reviewed drafts of the paper.

Zhongxiong Lai conceived and designed the experiments, authored or reviewed drafts of the paper.

Data Deposition

The following information was supplied regarding data availability:

The raw data/code is included in the manuscript (Showed in Supplementary ).

Funding

This work was supported by Natural Science Foundation of Fujian Province of Fujian Province (2013J05045), and the Research Fund of the Education Department of Fujian Province (JA12098), the youth academic backbone of Horticulturale College, Fujian Agriculture and Forestry University(61201400722), and the Major Science and Technology Program of Fujian Province (2015NZ0002-1). The funders had no role in study design, data collection and analysis, decision to publish, or preparation of the manuscript.


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