Steps in runDRAP workflow
This workflow is used to produce an assembly from one sample/tissue/development stage. It take as input R1 from single-end sequencing or R1 and R2 from paired-end sequencing and eventually a reference proteins set from closest species with known proteins.
Steps in runMeta workflow
This workflow is used to produce a merged assembly from several samples/tissues/development stage outputted by runDRAP. Inputs are runDRAP output folders and eventually a reference protein set.
Steps in runAssessment workflow
This workflow is used to evaluate quality for one assembly or for compare several assemblies produced from the same dataset. Inputs are the assembly/ies, R1 and eventually R2, and a reference protein set.