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Supplemental Information

Supplementary Table 1 for SNP primers used

Primers used for SNP validation in Sequenom MassARRAY assay

DOI: 10.7287/peerj.preprints.2116v1/supp-1

Supplementary Table 2 for The detailed genotypes that called from GATK and Sequenom MassARRAY assay for randomly selected 50 loci in 30 samples

DOI: 10.7287/peerj.preprints.2116v1/supp-2

Supplementary Table 3 for KEGG pathway enrichment results for the functional genes associated with the muscle EPA and DHA content

DOI: 10.7287/peerj.preprints.2116v1/supp-3

Supplementay table 4 for GO term enrichment results for the functional genes associated with the muscle EPA and DHA content

DOI: 10.7287/peerj.preprints.2116v1/supp-4

reads distribution along chromosomes for sample 88

DOI: 10.7287/peerj.preprints.2116v1/supp-5

reads depth distribution in the library sequencing for sample 88

DOI: 10.7287/peerj.preprints.2116v1/supp-6

EPA/DHA contents distribution

DOI: 10.7287/peerj.preprints.2116v1/supp-7

Additional Information

Competing Interests

The authors declared that there are not conflicts of interests

Author Contributions

Shijun Xiao conceived and designed the experiments, performed the experiments, analyzed the data, contributed reagents/materials/analysis tools, wrote the paper, prepared figures and/or tables, reviewed drafts of the paper.

Panpan Wang analyzed the data, reviewed drafts of the paper.

Linsong Dong analyzed the data, contributed reagents/materials/analysis tools, reviewed drafts of the paper.

Yaguang Zhang performed the experiments, contributed reagents/materials/analysis tools, reviewed drafts of the paper.

Zhaofang Han analyzed the data, reviewed drafts of the paper.

Qiurong Wang performed the experiments, contributed reagents/materials/analysis tools, reviewed drafts of the paper.

Zhiyong Wang conceived and designed the experiments, reviewed drafts of the paper.

Animal Ethics

The following information was supplied relating to ethical approvals (i.e., approving body and any reference numbers):

This sample collection and experiments was approved by the Animal Care and Use committee of Fisheries College of Jimei University (Animal Ethics no. 1067).

Data Deposition

The following information was supplied regarding data availability:

The sequencing short reads were deposited in the NCBI Sequence Read Archive (SRA) under project accession number of PRJNA309464.

Funding

This work was supported by grants from National Natural Science Foundation of China (U1205122), Natural Science Foundation of Fujian Province (2016J05081), National ‘863’ Project of China (2012AA10A403), and the Foundation for Innovation Research Team of Jimei University (2010A02). The funders had no role in study design, data collection and analysis, decision to publish, or preparation of the manuscript.


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