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Dagmar Waltemath
PeerJ Author
455 Points

Contributions by role

Preprint Author 455

Contributions by subject area

Bioinformatics
Computational Biology
Computational Science
Mathematical Biology
Cardiology
Translational Medicine
Science Policy
Data Mining and Machine Learning
Data Science
Molecular Biology
Biochemistry
Cell Biology

Dagmar Waltemath

PeerJ Author

Summary

Dagmar Waltemath received her Ph.D. in Computer Science from the University of Rostock, Germany in 2011. Her research interest is in strategies for the management,
provenance and integration of model-related data in systems biology and systems medicine. Since 2012, Dr. Waltemath is a junior research group leader in the Dept. of Systems Biology and Bioinformatics at the University of Rostock. Her group focuses on
developing methods to reproducibly simulate computational biology models including storing, annotating, searching and retrieving models and model-related data. Dr. Waltemath is also a COMBINE Coordinator and an SBML Editor.

Bioinformatics Computational Biology Computational Science

Editing Journals

Work details

Junior Research Group Leader

University of Rostock
Systems Biology & Bioinformatics

Websites

  • SEMS project
  • COMBINE website

PeerJ Contributions

  • Preprints 9
July 30, 2018 - Version: 4
Identifying frequent patterns in biochemical reaction networks - a workflow
Fabienne Lambusch, Dagmar Waltemath, Olaf Wolkenhauer, Kurt Sandkuhl, Christian Rosenke, Ron Henkel
https://doi.org/10.7287/peerj.preprints.1479v4
October 10, 2016 - Version: 1
SED-ML Web Tools: Generate, modify and export standard-compliant simulation studies
Frank T Bergmann, David Nickerson, Dagmar Waltemath, Martin Scharm
https://doi.org/10.7287/peerj.preprints.2515v1
March 13, 2016 - Version: 1
COMODI: An ontology to characterise differences in versions of computational models in biology
Martin Scharm, Dagmar Waltemath, Pedro Mendes, Olaf Wolkenhauer
https://doi.org/10.7287/peerj.preprints.1857v1
January 15, 2015 - Version: 1
Extracting reproducible simulation studies from model repositories using the CombineArchive Toolkit
Martin Scharm, Dagmar Waltemath
https://doi.org/10.7287/peerj.preprints.792v1
November 28, 2014 - Version: 1
An algorithm to detect and communicate the differences in computational models describing biological systems
Martin Scharm, Olaf Wolkenhauer, Dagmar Waltemath
https://doi.org/10.7287/peerj.preprints.640v1
November 28, 2014 - Version: 1
The CombineArchiveWeb application – A web based tool to handle files associated with modelling results
Martin Scharm, Florian Wendland, Martin Peters, Markus Wolfien, Tom Theile, Dagmar Waltemath
https://doi.org/10.7287/peerj.preprints.639v1
October 6, 2014 - Version: 2
Combining computational models, semantic annotations, and associated simulation experiments in a graph database
Ron Henkel, Olaf Wolkenhauer, Dagmar Walthemath
https://doi.org/10.7287/peerj.preprints.376v2
September 25, 2014 - Version: 1
The CombineArchive Toolkit - facilitating the transfer of research results
Martin Scharm, Florian Wendland, Martin Peters, Markus Wolfien, Tom Theile, Dagmar Waltemath
https://doi.org/10.7287/peerj.preprints.514v1
March 5, 2014 - Version: 1
A call for virtual experiments: accelerating the scientific process
Jonathan Cooper, Jon Olav Vik, Dagmar Waltemath
https://doi.org/10.7287/peerj.preprints.273v1