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October 2023

Table of Contents - PeerJ (Biology Articles)

October 26, 2023

Genome-wide identification and expression analysis of GA20ox and GA3ox genes during pod development in peanut

Jie Sun, Xiaoqian Zhang, Chun Fu, Naveed Ahmad, Chuanzhi Zhao, Lei Hou, Muhammad Naeem, Jiaowen Pan, Xingjun Wang, Shuzhen Zhao

https://doi.org/10.7717/peerj.16279 PubMed 37908413

October 4, 2023

Sourdough starters exhibit similar succession patterns but develop flour-specific climax communities

Erin A. McKenney, Lauren M. Nichols, Samuel Alvarado, Shannon Hardy, Kristen Kemp, Rachael Polmanteer, April Shoemaker, Robert R. Dunn

https://doi.org/10.7717/peerj.16163 PubMed 37810791

October 16, 2023

Identification and validation of key genes associated with pathogenesis and prognosis of gastric cancer

Ai Li, Yan Li, Yueyue Li, Mingming Zhang, Hong Zhang, Feixue Chen

https://doi.org/10.7717/peerj.16243 PubMed 37868053

October 31, 2023

RUNX1 facilitates heart failure progression through regulating TGF-β-induced cardiac remodeling

Peng Qi, Qian Zhai, Xiquan Zhang

https://doi.org/10.7717/peerj.16202 PubMed 37927796

October 10, 2023

Identification of a novel intermittent hypoxia-related prognostic lncRNA signature and the ceRNA of lncRNA GSEC/miR-873-3p/EGLN3 regulatory axis in lung adenocarcinoma

Peijun Liu, Long Zhou, Hao Chen, Yang He, Guangcai Li, Ke Hu

https://doi.org/10.7717/peerj.16242 PubMed 37842058

October 18, 2023

Isolation and functional analysis of acid-producing bacteria from bovine rumen

Jinming Yu, Cunyuan Li, Xiaoyue Li, Kaiping Liu, Zhuang Liu, Wei Ni, Ping Zhou, Limin Wang, Shengwei Hu

https://doi.org/10.7717/peerj.16294 PubMed 37868061

October 20, 2023

Analysis of the apoplast fluid proteome during the induction of systemic acquired resistance in Arabidopsis thaliana

Shuna Jiang, Liying Pan, Qingfeng Zhou, Wenjie Xu, Fuge He, Lei Zhang, Hang Gao

https://doi.org/10.7717/peerj.16324 PubMed 37876907

October 19, 2023

Transcriptome analysis reveals the mechanism of pyroptosis-related genes in septic cardiomyopathy

Haoyan Zhu, Jiahe Wu, Chenze Li, Ziyue Zeng, Tianwen He, Xin Liu, Qiongxin Wang, Xiaorong Hu, Zhibing Lu, Huanhuan Cai

https://doi.org/10.7717/peerj.16214 PubMed 37872948

October 5, 2023

Biodiversity of symbiotic microalgae associated with meiofaunal marine acoels in Southern Japan

Siratee Riewluang, Kevin C. Wakeman

https://doi.org/10.7717/peerj.16078 PubMed 37814628

October 2, 2023

Anti-methicillin-resistant Staphylococcus aureus and antibiofilm activity of new peptides produced by a Brevibacillus strain

Abiodun Ogunsile, Nuttapon Songnaka, Somchai Sawatdee, Monthon Lertcanawanichakul, Sucheewin Krobthong, Yodying Yingchutrakul, Jumpei Uchiyama, Apichart Atipairin

https://doi.org/10.7717/peerj.16143 PubMed 37810790

October 2, 2023

Genome-wide identification and characterization of ABA receptor pyrabactin resistance 1-like protein (PYL) family in oat

Wenbo Mi, Kaiqiang Liu, Guoling Liang, Zhifeng Jia, Xiang Ma, Zeliang Ju, Wenhui Liu

https://doi.org/10.7717/peerj.16181 PubMed 37810776

October 23, 2023

Harnessing the power of comparative genomics to support the distinction of sister species within Phyllosticta and development of highly specific detection of Phyllosticta citricarpa causing citrus black spot by real-time PCR

Renaud Ioos, Alexandra Puertolas, Camille Renault, Aida Ndiaye, Isabelle Cerf-Wendling, Jacqueline Hubert, Wen Wang, Chen Jiao, Hongye Li, Josep Armengol, Jaime Aguayo

https://doi.org/10.7717/peerj.16354 PubMed 37901471

October 19, 2023

Similarities and differences in the microbial structure of surface soils of different vegetation types

Yong Jiang, Wenxu Zhu, Keye Zhu, Yang Ge, Wuzheng Li, Nanyan Liao

https://doi.org/10.7717/peerj.16260 PubMed 37872953

October 17, 2023

Ginsenoside Rb1 enhanced immunity and altered the gut microflora in mice immunized by H1N1 influenza vaccine

Chuanqi Wan, Rufeng Lu, Chen Zhu, Haibo Wu, Guannan Shen, Yang Yang, Xiaowei Wu, Bangjiang Fang, Yuzhou He

https://doi.org/10.7717/peerj.16226 PubMed 37868069

October 26, 2023

Comparative transcriptome analysis on candidate genes associated with fruiting body growth and development in Lyophyllum decastes

Shanwen Ke, LingQiang Ding, Xin Niu, Huajia Shan, Liru Song, Yali Xi, Jiuhai Feng, Shenglong Wei, Qianqian Liang

https://doi.org/10.7717/peerj.16288 PubMed 37904843

October 10, 2023

Identification of ACHE as the hub gene targeting solasonine associated with non-small cell lung cancer (NSCLC) using integrated bioinformatics analysis

Tong Liu, Boke Zhang, Yating Gao, Xingxing Zhang, Jiabing Tong, Zegeng Li

https://doi.org/10.7717/peerj.16195 PubMed 37842037

October 23, 2023

Comprehensive genomic characterisation of the NAC transcription factor family and its response to drought stress in Eucommia ulmoides

Qi Wang, FengCheng Hu, ZhaoQun Yao, XinFeng Zhao, GuangMing Chu, Jing Ye

https://doi.org/10.7717/peerj.16298 PubMed 37901460

October 10, 2023

Molecular and phenotypic distinctions of macrophages in tolerant and susceptible to hypoxia rats

Dzhuliia Dzhalilova, Anna Kosyreva, Anastasiya Lokhonina, Ivan Tsvetkov, Polina Vishnyakova, Olga Makarova, Timur Fatkhudinov

https://doi.org/10.7717/peerj.16052 PubMed 37842051

October 26, 2023

Identification of key genes and validation of key gene aquaporin 1 on Wilms’ tumor metastasis

Hong Liu, Chen Jin, Xia Yang, Nan Xia, Chunzhi Guo, Qian Dong

https://doi.org/10.7717/peerj.16025 PubMed 37904849

October 3, 2023

Maize ZmHSP90 plays a role in acclimation to salt stress

Xinyan Yu, Yanxin Zhao, Yun Wang, Zhiqing Zou, Fenghai Li

https://doi.org/10.7717/peerj.15819 PubMed 37810777

October 2, 2023

Long non-coding RNA NMRAL2P promotes glycolysis and reduces ROS in head and neck tumors by interacting with the ENO1 protein and promoting GPX2 transcription

Qian Nie, Huan Cao, JianWang Yang, Tao Liu, BaoShan Wang

https://doi.org/10.7717/peerj.16140 PubMed 37810778

October 24, 2023

Molecular characterization, expression patterns and cellular localization of BCAS2 gene in male Hezuo pig

Yuran Tang, Bo Zhang, Haixia Shi, Zunqiang Yan, Pengfei Wang, Qiaoli Yang, Xiaoyu Huang, Shuangbao Gun

https://doi.org/10.7717/peerj.16341 PubMed 37901468

October 11, 2023

Mitochondrial genome characteristics of six Phylloscopus species and their phylogenetic implication

Chao Yang, Xiaomei Dong, Qingxiong Wang, Xiang Hou, Hao Yuan, Xuejuan Li

https://doi.org/10.7717/peerj.16233 PubMed 37842035

October 12, 2023

Nomogram model for predicting the risk of post-stroke depression based on clinical characteristics and DNA methylation

Shihang Luo, Fan Liu, Qiao Liao, Hengshu Chen, Tongtong Zhang, Rui Mao

https://doi.org/10.7717/peerj.16240 PubMed 37846310

October 4, 2023

Exploring the relationship between environmental DNA concentration and biomass in Asian giant softshell turtle (Pelochelys cantorii)

Xiaoyou Hong, Kaikuo Wang, Liqin Ji, Xiaoli Liu, Lingyun Yu, Jie Wei, Yakun Wang, Chengqing Wei, Wei Li, Xinping Zhu

https://doi.org/10.7717/peerj.16218 PubMed 37810767

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