Biology & Life sciences - Table of Contents

August 26, 2019

The RIPper, a web-based tool for genome-wide quantification of Repeat-Induced Point (RIP) mutations

5 citations

310 downloads

3,715 views

Stephanie van Wyk, Christopher H. Harrison, Brenda D. Wingfield, Lieschen De Vos, Nicolaas A. van der Merwe, Emma T. Steenkamp

https://doi.org/10.7717/peerj.7447 PubMed 31523495

August 8, 2019

Identification of crucial genes based on expression profiles of hepatocellular carcinomas by bioinformatics analysis

8 citations

573 downloads

2,290 views

Ze-Kun Liu, Ren-Yu Zhang, Yu-Le Yong, Zhi-Yun Zhang, Can Li, Zhi-Nan Chen, Huijie Bian

https://doi.org/10.7717/peerj.7436 PubMed 31410310

August 6, 2019

miRDRN—miRNA disease regulatory network: a tool for exploring disease and tissue-specific microRNA regulatory networks

379 downloads

2,091 views

Hsueh-Chuan Liu, Yi-Shian Peng, Hoong-Chien Lee

https://doi.org/10.7717/peerj.7309 PubMed 31404401

August 1, 2019

Identification of a novel four-lncRNA signature as a prognostic indicator in cirrhotic hepatocellular carcinoma

6 citations

511 downloads

1,649 views

Linkun Ma, Cunliang Deng

https://doi.org/10.7717/peerj.7413 PubMed 31396449

August 6, 2019

Pangenomic type III effector database of the plant pathogenic Ralstonia spp.

15 citations

579 downloads

1,570 views

Cyrus Raja Rubenstein Sabbagh, Sebastien Carrere, Fabien Lonjon, Fabienne Vailleau, Alberto P. Macho, Stephane Genin, Nemo Peeters

https://doi.org/10.7717/peerj.7346 PubMed 31579561

August 27, 2019

Marked variations in gut microbiota and some innate immune responses of fresh water crayfish, marron (Cherax cainii, Austin 2002) fed dietary supplementation of Clostridium butyricum

9 citations

541 downloads

1,501 views

Md Javed Foysal, Thi Thu Thuy Nguyen, Md Reaz Chaklader, Muhammad A.B. Siddik, Chin-Yen Tay, Ravi Fotedar, Sanjay Kumar Gupta

https://doi.org/10.7717/peerj.7553 PubMed 31523510

August 26, 2019

Profiling the lncRNA-miRNA-mRNA ceRNA network to reveal potential crosstalk between inflammatory bowel disease and colorectal cancer

7 citations

598 downloads

1,468 views

Fangfang Sun, Weiwei Liang, Kejun Tang, Mengying Hong, Jing Qian

https://doi.org/10.7717/peerj.7451 PubMed 31523496

August 16, 2019

Risk and prognostic nomograms for hepatocellular carcinoma with newly-diagnosed pulmonary metastasis using SEER data

3 citations

429 downloads

1,314 views

Guanzhi Ye, Lin Wang, Zhengyang Hu, Jiaqi Liang, Yunyi Bian, Cheng Zhan, Zongwu Lin

https://doi.org/10.7717/peerj.7496 PubMed 31440435

August 29, 2019

Mapping research trends of retinal vein occlusion from 2009 to 2018: a bibliometric analysis

2 citations

418 downloads

1,303 views

Fangkun Zhao, Fengkun Du, Dong Shi, Wenkai Zhou, Youhong Jiang, Liwei Ma

https://doi.org/10.7717/peerj.7603 PubMed 31528507

August 8, 2019

Genome-wide identification, characterization and expression analysis of the HD-Zip gene family in the stem development of the woody plant Prunus mume

2 citations

456 downloads

1,269 views

Lulu Li, Tangchun Zheng, Xiaokang Zhuo, Suzhen Li, Like Qiu, Jia Wang, Tangren Cheng, Qixiang Zhang

https://doi.org/10.7717/peerj.7499 PubMed 31410318

August 28, 2019

HiLDA: a statistical approach to investigate differences in mutational signatures

3 citations

329 downloads

1,265 views

Zhi Yang, Priyatama Pandey, Darryl Shibata, David V. Conti, Paul Marjoram, Kimberly D. Siegmund

https://doi.org/10.7717/peerj.7557 PubMed 31523512

August 14, 2019

Comprehensive classification of the plant non-specific lipid transfer protein superfamily towards its sequence–structure–function analysis

1 citation

495 downloads

1,225 views

Cécile Fleury, Jérôme Gracy, Marie-Françoise Gautier, Jean-Luc Pons, Jean-François Dufayard, Gilles Labesse, Manuel Ruiz, Frédéric de Lamotte

https://doi.org/10.7717/peerj.7504 PubMed 31428542

August 6, 2019

Application of cell-free DNA sequencing in characterization of bloodborne microbes and the study of microbe-disease interactions

5 citations

359 downloads

1,181 views

Kuo-Ping Chiu, Alice L. Yu

https://doi.org/10.7717/peerj.7426 PubMed 31404440

August 5, 2019

Binding interactions of epididymal protease inhibitor and semenogelin-1: a homology modeling, docking and molecular dynamics simulation study

1 citation

492 downloads

1,147 views

Changyu Shan, Hongwei Li, Yuping Zhang, Yuyan Li, Yingchun Chen, Wei He

https://doi.org/10.7717/peerj.7329 PubMed 31404433

August 1, 2019

Downregulated expression of ARHGAP10 correlates with advanced stage and high Ki-67 index in breast cancer

1 citation

382 downloads

1,082 views

Yujing Li, Beilei Zeng, Yunhai Li, Chong Zhang, Guosheng Ren

https://doi.org/10.7717/peerj.7431 PubMed 31396458

August 23, 2019

Metabolic alterations in pea leaves during arbuscular mycorrhiza development

4 citations

551 downloads

1,052 views

Oksana Y. Shtark, Roman K. Puzanskiy, Galina S. Avdeeva, Andrey P. Yurkov, Galina N. Smolikova, Vladislav V. Yemelyanov, Marina S. Kliukova, Alexey L. Shavarda, Anastasiia A. Kirpichnikova, Aleksandr I. Zhernakov, Alexey M. Afonin, Igor A. Tikhonovich, Vladimir A. Zhukov, Maria F. Shishova

https://doi.org/10.7717/peerj.7495 PubMed 31497392

August 2, 2019

Integrated mRNA and miRNA profiling in NIH/3T3 cells in response to bovine papillomavirus E6 gene expression

2 citations

302 downloads

990 views

Feng Pang, Mengmeng Zhang, Guohua Li, Zhenxing Zhang, Haifeng Huang, Baobao Li, Chengqiang Wang, Xiaohong Yang, Yiying Zheng, Qi An, Luyin Zhang, Li Du, Fengyang Wang

https://doi.org/10.7717/peerj.7442 PubMed 31396463

August 26, 2019

Bridging the TB data gap: in silico extraction of rifampicin-resistant tuberculosis diagnostic test results from whole genome sequence data

308 downloads

989 views

Kamela C. S. Ng, Jean Claude S. Ngabonziza, Pauline Lempens, Bouke C. de Jong, Frank van Leth, Conor J. Meehan

https://doi.org/10.7717/peerj.7564 PubMed 31523514

August 1, 2019

Association of genetic polymorphisms in SOD2, SOD3, GPX3, and GSTT1 with hypertriglyceridemia and low HDL-C level in subjects with high risk of coronary artery disease

1 citation

415 downloads

916 views