May 2018

Table of Contents - PeerJ (Biology Articles)

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bioinformatics
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Blue whale migratory pathways along the Eastern South Pacific

Tracks of five wide-ranging blue whales tagged in Chilean Northern Patagonia.

April 30, 2018

Blue whale migratory pathways along the Eastern South Pacific

Researchers tracked 10 blue whales and documented their individual variations in departure time, northbound migratory routes and potential wintering grounds in the Eastern South Pacific.

- read article

May 28, 2018
Non-biological synthetic spike-in controls and the AMPtk software pipeline improve mycobiome data
59 citations
891 downloads
8,468 views
, , ,
biodiversity
bioinformatics
ecology
microbiology
mycology
https://doi.org/10.7717/peerj.4925 PubMed 29868296
May 4, 2018
Temporally-aware algorithms for the classification of anuran sounds
3 citations
905 downloads
3,047 views
, , ,
bioinformatics
computational-biology
data-mining-and-machine-learning
climate-change-biology
https://doi.org/10.7717/peerj.4732 PubMed 29740517
May 4, 2018
EnzyNet: enzyme classification using 3D convolutional neural networks on spatial representation
25 citations
999 downloads
2,986 views
, , , , ,
bioinformatics
computational-biology
genomics
computational-science
https://doi.org/10.7717/peerj.4750 PubMed 29740518
May 23, 2018
Effects of preservation method on canine (Canis lupus familiaris) fecal microbiota
8 citations
684 downloads
2,925 views
, , ,
biodiversity
bioinformatics
genomics
microbiology
veterinary-medicine
https://doi.org/10.7717/peerj.4827 PubMed 29844978
May 4, 2018
Candidate genes in gastric cancer identified by constructing a weighted gene co-expression network
26 citations
759 downloads
2,374 views
, , , , ,
bioinformatics
genetics
oncology
https://doi.org/10.7717/peerj.4692 PubMed 29740513
May 28, 2018
BLAST-based validation of metagenomic sequence assignments
5 citations
584 downloads
2,336 views
, , ,
bioinformatics
genomics
microbiology
https://doi.org/10.7717/peerj.4892 PubMed 29868286
May 29, 2018
MIPhy: identify and quantify rapidly evolving members of large gene families
1 citation
404 downloads
2,158 views
, ,
bioinformatics
computational-biology
evolutionary-studies
https://doi.org/10.7717/peerj.4873 PubMed 29868279
May 4, 2018
Bioinformatic analysis and identification of potential prognostic microRNAs and mRNAs in thyroid cancer
18 citations
642 downloads
2,095 views
, , , , , , , ,
bioinformatics
https://doi.org/10.7717/peerj.4674 PubMed 29740512
May 9, 2018
Differential expression patterns of housekeeping genes increase diagnostic and prognostic value in lung cancer
3 citations
604 downloads
2,035 views
, , , , ,
bioinformatics
computational-biology
genomics
oncology
medical-genetics
https://doi.org/10.7717/peerj.4719 PubMed 29761043
May 11, 2018
A strategy to find novel candidate anti-Alzheimer’s disease drugs by constructing interaction networks between drug targets and natural compounds in medical plants
4 citations
1,202 downloads
2,022 views
, , , , , , , , ,
bioinformatics
computational-biology
cognitive-disorders
https://doi.org/10.7717/peerj.4756 PubMed 29770277
May 23, 2018
The complete chloroplast genome of Colobanthus apetalus (Labill.) Druce: genome organization and comparison with related species
5 citations
572 downloads
2,021 views
, , , , , , , ,
biodiversity
bioinformatics
genetics
genomics
plant-science
https://doi.org/10.7717/peerj.4723 PubMed 29844954
May 21, 2018
On the efficiency of the genetic code after frameshift mutations
18 citations
363 downloads
1,893 views
,
bioinformatics
evolutionary-studies
genetics
https://doi.org/10.7717/peerj.4825 PubMed 29844977
May 30, 2018
Characterization of tumor heterogeneity by latent haplotypes: a sequential Monte Carlo approach
2 citations
276 downloads
1,674 views
,
bioinformatics
computational-biology
https://doi.org/10.7717/peerj.4838 PubMed 29868266
May 24, 2018
Divergent and convergent evolution of housekeeping genes in human–pig lineage
4 citations
466 downloads
1,647 views
, ,
bioinformatics
evolutionary-studies
genetics
https://doi.org/10.7717/peerj.4840 PubMed 29844985
May 29, 2018
DACCOR–Detection, characterization, and reconstruction of repetitive regions in bacterial genomes
1 citation
351 downloads
1,529 views
, ,
bioinformatics
computational-biology
https://doi.org/10.7717/peerj.4742 PubMed 29868249
May 16, 2018
Integrated bioinformatic changes and analysis of retina with time in diabetic rats
3 citations
666 downloads
1,436 views
, , , ,
bioinformatics
ophthalmology
https://doi.org/10.7717/peerj.4762 PubMed 29785346
May 16, 2018
Identification of potential crucial genes and pathways associated with vein graft restenosis based on gene expression analysis in experimental rabbits
386 downloads
1,435 views
, , , , , , ,
bioinformatics
cell-biology
genetics
genomics
cardiology
https://doi.org/10.7717/peerj.4704 PubMed 29785339
May 29, 2018
Modeling transcriptional activation changes to Gal4 variants via structure-based computational mutagenesis
3 citations
380 downloads
1,434 views
, ,
bioinformatics
computational-biology
data-mining-and-machine-learning
https://doi.org/10.7717/peerj.4844 PubMed 29868268
May 25, 2018
Rapid evolution of the Helicobacter pylori AlpA adhesin in a high gastric cancer risk region from Colombia
2 citations
432 downloads
1,393 views
, , ,
bioinformatics
evolutionary-studies
genetics
microbiology
https://doi.org/10.7717/peerj.4846 PubMed 29844987
May 2, 2018
From in silico to in vitro: a trip to reveal flavonoid binding on the Rattus norvegicus Kir6.1 ATP-sensitive inward rectifier potassium channel
3 citations
481 downloads
1,358 views
, , , , , ,
biochemistry
bioinformatics
computational-biology
https://doi.org/10.7717/peerj.4680 PubMed 29736333
May 14, 2018
Modulation of transcriptional activity in brain lower grade glioma by alternative splicing
3 citations
391 downloads
1,323 views
, , ,
bioengineering
bioinformatics
biotechnology
genetics
computational-science
https://doi.org/10.7717/peerj.4686 PubMed 29780667
May 28, 2018
Linear Lepidopteran ambidensovirus 1 sequences drive random integration of a reporter gene in transfected Spodoptera frugiperda cells
300 downloads
1,134 views
, , , ,
bioinformatics
biotechnology
cell-biology
virology
https://doi.org/10.7717/peerj.4860 PubMed 29868273
Blue whale migratory pathways along the Eastern South Pacific

Tracks of five wide-ranging blue whales tagged in Chilean Northern Patagonia.

April 30, 2018

Blue whale migratory pathways along the Eastern South Pacific

Researchers tracked 10 blue whales and documented their individual variations in departure time, northbound migratory routes and potential wintering grounds in the Eastern South Pacific.

- read article

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