title: PeerJ description: Articles published in PeerJ link: https://peerj.com/articles/index.rss3?journal=peerj&page=303 creator: info@peerj.com PeerJ errorsTo: info@peerj.com PeerJ language: en title: Comparative study of the gut microbial community structure of Spodoptera frugiperda and Spodoptera literal (Lepidoptera) link: https://peerj.com/articles/17450 last-modified: 2024-06-07 description: BackgroundSpodoptera frugiperda, the fall armyworm is a destructive invasive pest, and S. litura the tobacco cutworm, is a native species closely related to S. frugiperda. The gut microbiota plays a vital role in insect growth, development, metabolism and immune system. Research on the competition between invasive species and closely related native species has focused on differences in the adaptability of insects to the environment. Little is known about gut symbiotic microbe composition and its role in influencing competitive differences between these two insects.MethodsWe used a culture-independent approach targeting the 16S rRNA gene of gut bacteria of 5th instar larvae of S. frugiperda and S. litura. Larvae were reared continuously on maize leaves for five generations. We analyzed the composition, abundance, diversity, and metabolic function of gut microbiomes of S. frugiperda and S. litura larvae.ResultsFirmicutes, Proteobacteria, and Bacteroidetes were the dominant bacterial phyla in both species. Enterococcus, ZOR0006, Escherichia, Bacteroides, and Lactobacillus were the genera with the highest abundance in S. frugiperda. Enterococcus, Erysipelatoclostridium, ZOR0006, Enterobacter, and Bacteroides had the highest abundance in S. litura. According to α-diversity analysis, the gut bacterial diversity of S. frugiperda was significantly higher than that of S. litura. KEGG analysis showed 15 significant differences in metabolic pathways between S. frugiperda and S. litura gut bacteria, including transcription, cell growth and death, excretory system and circulatory system pathways.ConclusionIn the same habitat, the larvae of S. frugiperda and S. litura showed significant differences in gut bacterial diversity and community composition. Regarding the composition and function of gut bacteria, the invasive species S. frugiperda may have a competitive advantage over S. litura. This study provides a foundation for developing control strategies for S. frugiperda and S. litura. creator: Yaping Chen creator: Yao Chen creator: Yahong Li creator: Ewei Du creator: Zhongxiang Sun creator: Zhihui Lu creator: Furong Gui uri: https://doi.org/10.7717/peerj.17450 license: https://creativecommons.org/licenses/by/4.0/ rights: ©2024 Chen et al. title: Agreement and differences between the equations for estimating muscle and bone mass using the anthropometric method in recreational strength trainees link: https://peerj.com/articles/17506 last-modified: 2024-06-07 description: IntroductionThe interest in estimating muscle mass (MM) and bone mass (BM) has grown in the sporting arena, and more specifically in recreational strength trainees, leading to the creation of different strategies to assess them. The aims were: 1) to investigate the agreement between different MM and BM formulas, and the muscle-bone index (MBI), and to establish the differences between them, in a healthy young adult population; and 2) to analyze if there are differences between males and females in the comparison of MM, BM and MBI formulas.MethodsThis study followed a descriptive cross-sectional design. A total of 130 adult active recreational strength trainees were evaluated according to the procedures described by the International Society for the Advancement in Kinanthropometry (ISAK). Estimations were made in kilograms of MM and BM by following the equations by different authors.ResultsThe results showed significant differences between the values obtained by all the MM and BM formulas in the general sample (p < 0.001), and by the majority of formulas for male and female samples. In the general sample, Lin’s coefficient indicated a strong agreement between Kerr, Lee, and Poortmans’ MM estimation equations (concordance correlation coefficient (CCC) = 0.96–0.97). However, when stratifying by sex, this agreement persisted only in males (CCC = 0.90–0.94), in contrast with a lack of agreement observed in females (CCC < 0.90). Discrepancies in bone mass agreement were noted both in the general sample (CCC < 0.15) and when stratified by sex (CCC < 0.12).ConclusionsIn general, differences were found between the values reported by the MM and BM formulas in recreational strength trainees, without an agreement between them. Sex was shown to significantly influence the differences found. The practical implications are that when comparing an individual with reference tables, other studies, or if analyzing an individual’s evolution, the same estimation equation should be used, as they are not interchangeable. creator: Nicolás Baglietto creator: Mario Albaladejo-Saura creator: Francisco Esparza-Ros creator: Raquel Vaquero-Cristóbal uri: https://doi.org/10.7717/peerj.17506 license: https://creativecommons.org/licenses/by/4.0/ rights: © 2024 Baglietto et al. title: Research advances in predicting the expansion of hypertensive intracerebral hemorrhage based on CT images: an overview link: https://peerj.com/articles/17556 last-modified: 2024-06-07 description: Hematoma expansion (HE) is an important risk factor for death or poor prognosis in patients with hypertensive intracerebral hemorrhage (HICH). Accurately predicting the risk of HE in patients with HICH is of great clinical significance for timely intervention and improving patient prognosis. Many imaging signs reported in literatures showed the important clinical value for predicting HE. In recent years, the development of radiomics and artificial intelligence has provided new methods for HE prediction with high accuracy. Therefore, this article reviews the latest research progress in CT imaging, radiomics, and artificial intelligence of HE, in order to help identify high-risk patients for HE in clinical practice. creator: Min Ai creator: Hanghang Zhang creator: Junbang Feng creator: Hongying Chen creator: Di Liu creator: Chang Li creator: Fei Yu creator: Chuanming Li uri: https://doi.org/10.7717/peerj.17556 license: https://creativecommons.org/licenses/by-nc/4.0 rights: © 2024 Ai et al. title: The antimicrobial activity of tea tree oil (Melaleuca alternifolia) and its metal nanoparticles in oral bacteria link: https://peerj.com/articles/17241 last-modified: 2024-06-06 description: Tea tree (Melaleuca alternifolia) oil (TTO) is an antimicrobial agent, and hence, its use in fabricating nanoparticles (NP) may be useful in providing more efficacious antimicrobial agents. The current research aimed to test the antimicrobial efficacy of TTO and its TTO-Metal-NPs against oral microbes: Porphyromonas gingivalis, Enterococcus faecalis, and Streptococcus mutans. The antimicrobial activity of TTO and zinc (Zn) and iron (Fe) nanoparticles (NPs) and the combined effects of antimicrobial agents were investigated using agar well diffusion assays. Fourier-transform infrared spectroscopy (FT-IR) was used to identify the phyto-constituents of TTO. Field emission scanning electron microscopy (FE-SEM), dynamic light scatter (DLS), and zeta potential were utilized to analyze the biogenic nanoparticles’ morphology, size, and potential. The antimicrobial mode of action was determined by assessing the morphological changes under scanning electron microscopy (SEM). The TTO extracts converted Zn and Fe ions to NPs, having an average size of 97.50 (ZnNPs) and 102.4 nm (FeNPs). All tested agents had significant antibacterial efficacy against the tested oral microbes. However, the TTO extract was more efficacious than the NPs. Combination treatment of TTO with antibiotics resulted in partial additive effects against P. gingivalis and partial antagonistic effects against E. faecalis, S. mutans, and common mouthwashes (Oral B and chlorhexidine). TTO and NP-treated bacteria underwent morphological changes on treatment. M. alternifolia phytochemicals could be useful for further research and development of antimicrobial NPs. The current study highlights the variance in activity observed for different types of bacteria and antagonistic effects seen with common mouthwashes, which represent a threat to therapeutic efficacy and heighten the risk of clinical microbial resistance. creator: Afrah E. Mohammed creator: Reham M. Aldahasi creator: Ishrat Rahman creator: Ashwag Shami creator: Modhi Alotaibi creator: Munerah S. BinShabaib creator: Shatha S. ALHarthi creator: Kawther Aabed uri: https://doi.org/10.7717/peerj.17241 license: https://creativecommons.org/licenses/by/4.0/ rights: ©2024 Mohammed et al. title: Lumbar extension peak-torque, muscle endurance and motor imagery in junior-elite basketballers with and without a history of low back pain: a pilot study link: https://peerj.com/articles/17508 last-modified: 2024-06-06 description: ObjectivesLow back pain (LBP) is common in elite athletes. Several peripheral and central factors have been identified to be altered in non-athletic LBP populations, however whether these alterations also exist in elite athletes with LBP is unknown. The aim of this study was to determine whether elite basketballers with a history of persistent LBP perform worse than those without LBP at a lumbar muscle endurance task, a lumbar extension peak-torque task, and a lumbar motor imagery task.MethodAn observational pilot study. Twenty junior elite-level male basketballers with (n = 11) and without (n = 9) a history of persistent LBP were recruited. Athletes completed a lumbar extensor muscle endurance (Biering-Sorensen) task, two lumbar extensor peak-torque (modified Biering-Sorensen) tasks and two motor imagery (left/right lumbar and hand judgement) tasks across two sessions (48 hours apart). Performance in these tasks were compared between the groups with and without a history of LBP.ResultsYoung athletes with a history of LBP had reduced lumbar extensor muscle endurance (p < 0.001), reduced lumbar extension peak-torque (p < 0.001), and were less accurate at the left/right lumbar judgement task (p = 0.02) but no less accurate at a left/right hand judgement task (p = 0.59), than athletes without a history of LBP. Response times for both left/right judgement tasks did not differ between groups (lumbar p = 0.24; hand p = 0.58).ConclusionsJunior elite male basketballers with a history of LBP demonstrate reduced lumbar extensor muscle endurance and lumbar extension peak-torque and are less accurate at a left/right lumbar rotation judgement task, than those without LBP. creator: Tim Glazebrook creator: Jennifer Cooke creator: Gordon Waddington creator: Sarah B. Wallwork uri: https://doi.org/10.7717/peerj.17508 license: https://creativecommons.org/licenses/by/4.0/ rights: ©2024 Glazebrook et al. title: Movement patterns of two reintegrated African elephant (Loxodonta africana) herds: transitioning from captivity to free-living link: https://peerj.com/articles/17535 last-modified: 2024-06-06 description: With the escalating challenges in captive elephant management, the study of elephant reintegration emerges as a pivotal area of research, primarily addressing the enhancement of animal welfare. The term ‘reintegration’ refers to the process of rehabilitating captive elephants to a natural system, allowing them to roam freely without intensive human intervention. There is a relative paucity of research addressing the behavioural adaptations post-reintegration, despite reintegration of over 20 elephants across various fenced reserves in South Africa. Our study centres on two distinct herds of reintegrated African elephants, monitoring their movement patterns in two South African reserves over a 57-month period post-release. The primary goal of the study was to establish whether the flexibility and adaptability of movement behaviour of reintegrated elephants can be considered as one of the indicators of determining the success of such an operation. The second aim of our study was to investigate if the reintegrated elephants demonstrated an adaptability to their environment through their hourly, daily, and seasonal ranging patterns after a period of free roaming that exceeded 4 years. Our findings indicated that reintegrated elephants, much like their wild counterparts (movement based on literature), displayed notable seasonal and diurnal variations in key movement parameters, such as utilisation distribution areas and reserve utilization. These patterns changed over time, reflecting an adaptive shift in movement patterns after several years of free roaming. Notably, the trajectory of changes in movement parameters varied between herds, indicating unique adaptation responses, likely resulting from differences in the reintegration process (familiarity of reserve, season of release, presence of wild elephants). Although our study is constrained by the limited number of reintegrated herds available for analysis, it underscores the potential of captive elephants to successfully adapt to a free-living environment, emphasising the promising implications of reintegration initiatives. creator: Tenisha Roos creator: Andrew Purdon creator: Victoria Boult creator: Audrey Delsink creator: Brett Mitchell creator: Petrus Johannes Kilian uri: https://doi.org/10.7717/peerj.17535 license: https://creativecommons.org/licenses/by/4.0/ rights: © 2024 Roos et al. title: Electrocortical theta activity may reflect sensory prediction errors during adaptation to a gradual gait perturbation link: https://peerj.com/articles/17451 last-modified: 2024-06-05 description: Locomotor adaptation to abrupt and gradual perturbations are likely driven by fundamentally different neural processes. The aim of this study was to quantify brain dynamics associated with gait adaptation to a gradually introduced gait perturbation, which typically results in smaller behavioral errors relative to an abrupt perturbation. Loss of balance during standing and walking elicits transient increases in midfrontal theta oscillations that have been shown to scale with perturbation intensity. We hypothesized there would be no significant change in anterior cingulate theta power (4–7 Hz) with respect to pre-adaptation when a gait perturbation is introduced gradually because the gradual perturbation acceleration and stepping kinematic errors are small relative to an abrupt perturbation. Using mobile electroencephalography (EEG), we measured gait-related spectral changes near the anterior cingulate, posterior cingulate, sensorimotor, and posterior parietal cortices as young, neurotypical adults (n = 30) adapted their gait to an incremental split-belt treadmill perturbation. Most cortical clusters we examined (>70%) did not exhibit changes in electrocortical activity between 2–50 Hz. However, we did observe gait-related theta synchronization near the left anterior cingulate cortex during strides with the largest errors, as measured by step length asymmetry. These results suggest gradual adaptation with small gait asymmetry and perturbation magnitude may not require significant cortical resources beyond normal treadmill walking. Nevertheless, the anterior cingulate may remain actively engaged in error monitoring, transmitting sensory prediction error information via theta oscillations. creator: Noelle A. Jacobsen creator: Daniel Perry Ferris uri: https://doi.org/10.7717/peerj.17451 license: https://creativecommons.org/licenses/by/4.0/ rights: ©2024 Jacobsen et al. title: Fast grassland recovery from viable propagules after reintroducing traditional mowing management on a steep slope link: https://peerj.com/articles/17487 last-modified: 2024-06-05 description: Semi-natural grasslands on steep slopes often show high plant species diversity. These grasslands were traditionally maintained through mowing and/or grazing. The traditional management practices help to maintain species diversity, whereas land abandonment reduces diversity by increasing competition from dominant species and reducing seedling recruitment. The reintroduction of management can reverse species diversity declines, but suitable grassland restoration programs are scarce in Japan. To study the effect of short-term abandonment on seedling ecology, we monitored the vegetation of a Susogari grassland that had been abandoned for 3 years; the grassland occupies a steep slope (ca. 50°) on a hillside above paddy fields, and was traditionally mown. We monitored the vegetation before abandonment, in the 3rd year of abandonment, and in the 1st and 2nd years after restoration of mowing management. Emergence and survival of seedlings was monitored for 18 months after reintroduction of management. We monitored 1,183 seedlings of grassland species and non-target annuals in ten 1-m2 plots. After mowing was reintroduced, most grassland species reappeared or increased in the first and second years. Few seedlings of perennial plants and no seedlings of annuals flowered. An exotic species, Solidago altissima, had a lower survival rate (10%) than grassland species (>30%), and all but two grassland species survived over the 18-month period. Although vegetation composition was not fully recovered, our findings suggest that a steep slope acts as a strong filter that inhibits the establishment of non-target species while enhancing persistence of target grassland species. creator: Susumu Yamada creator: Wakana Yoshida creator: Minori Iida creator: Yoshiko Kitagawa creator: Jonathan Mitchley uri: https://doi.org/10.7717/peerj.17487 license: https://creativecommons.org/licenses/by/4.0/ rights: ©2024 Yamada et al. title: Predictive value of plasma ephrinB2 levels for amputation risk following endovascular revascularization in peripheral artery disease link: https://peerj.com/articles/17531 last-modified: 2024-06-05 description: BackgroundThe aim of this study is to investigate the expression levels of ephrinB2 in patients with lower extremity peripheral arterial disease (PAD) and explore its association with the severity of the disease and the risk of amputation after endovascular revascularization.MethodsDuring the period from March 2021 to March 2023, this study collected blood samples and clinical data from 133 patients diagnosed with lower extremity PAD and 51 healthy volunteer donors. The severity of lower extremity PAD patients was classified using the Rutherford categories. The expression of ephrin-B2 in plasma samples was detected using the Western Blotting.ResultsCompared to the control group, the levels of serum ephrinB2 in patients were significantly elevated (p < 0.001). Moreover, the plasma EphrinB2 levels were positively correlated with white blood cell counts (r = 0.204, p = 0.018), neutrophil counts (r = 0.174, p = 0.045), and neutrophil-to-lymphocyte ratio (NLR) (r = 0.223, p = 0.009). Furthermore, the AUCs of plasma ephrinB2 level, NLR, and their combination as predictors for amputation events within 30 months after lower extremity PAD endovascular revascularization were 0.659, 0.730 and 0.811. In the high-ephrinB2 group, the incidence of amputation events within 30 months after endovascular revascularization was higher.ConclusionsPlasma EphrinB2 levels may be linked to lower extremity PAD development, inflammation, and postoperative amputation. Combining EphrinB2 and NLR can improve amputation prediction accuracy after endovascular revascularization in lower extremity PAD patients. creator: Pengcheng Guo creator: Lei Chen creator: Dafeng Yang creator: Lei Zhang creator: Chang Shu creator: Huande Li creator: Jieting Zhu creator: Jienan Zhou creator: Xin Li uri: https://doi.org/10.7717/peerj.17531 license: https://creativecommons.org/licenses/by/4.0/ rights: © 2024 Guo et al. title: Land cover and space use influence coyote carnivory: evidence from stable-isotope analysis link: https://peerj.com/articles/17457 last-modified: 2024-06-04 description: For many species, the relationship between space use and diet composition is complex, with individuals adopting varying space use strategies such as territoriality to facilitate resource acquisition. Coyotes (Canis latrans) exhibit two disparate types of space use; defending mutually exclusive territories (residents) or moving nomadically across landscapes (transients). Resident coyotes have increased access to familiar food resources, thus improved foraging opportunities to compensate for the energetic costs of defending territories. Conversely, transients do not defend territories and are able to redirect energetic costs of territorial defense towards extensive movements in search of mates and breeding opportunities. These differences in space use attributed to different behavioral strategies likely influence foraging and ultimately diet composition, but these relationships have not been well studied. We investigated diet composition of resident and transient coyotes in the southeastern United States by pairing individual space use patterns with analysis of stable carbon (δ13C) and nitrogen (δ15N) isotope values to assess diet. During 2016–2017, we monitored 41 coyotes (26 residents, 15 transients) with GPS radio-collars along the Savannah River area in the southeastern United States. We observed a canopy effect on δ13C values and little anthropogenic food in coyote diets, suggesting 13C enrichment is likely more influenced by reduced canopy cover than consumption of human foods. We also observed other land cover effects, such as agricultural cover and road density, on δ15N values as well as reduced space used by coyotes, suggesting that cover types and localized, resident-like space use can influence the degree of carnivory in coyotes. Finally, diets and niche space did not differ between resident and transient coyotes despite differences observed in the proportional contribution of potential food sources to their diets. Although our stable isotope mixing models detected differences between the diets of resident and transient coyotes, both relied mostly on mammalian prey (52.8%, SD = 15.9 for residents, 42.0%, SD = 15.6 for transients). Resident coyotes consumed more game birds (21.3%, SD = 11.6 vs 13.7%, SD = 8.8) and less fruit (10.5%, SD = 6.9 vs 21.3%, SD = 10.7) and insects (7.2%, SD = 4.7 vs 14.3%, SD = 8.5) than did transients. Our findings indicate that coyote populations fall on a feeding continuum of omnivory to carnivory in which variability in feeding strategies is influenced by land cover characteristics and space use behaviors. creator: Sarah C. Webster creator: Joseph W. Hinton creator: Michael J. Chamberlain creator: Jazmin J. Murphy creator: James C. Beasley uri: https://doi.org/10.7717/peerj.17457 license: https://creativecommons.org/licenses/by/4.0/ rights: © 2024 Webster et al.