title: PeerJ description: Articles published in PeerJ link: https://peerj.com/articles/index.rss3?journal=peerj&page=1343 creator: info@peerj.com PeerJ errorsTo: info@peerj.com PeerJ language: en title: Temperament and character profiles of medical students associated with tolerance of ambiguity and perfectionism link: https://peerj.com/articles/7109 last-modified: 2019-06-13 description: BackgroundCertain personal attributes, such as perfectionism and tolerance of ambiguity, have been identified as influential in high achieving students. Medical students have been identified as high achievers and perfectionistic, and as such may be challenged by ambiguity. Medical students undertake a long and challenging degree. Personality has been shown to influence the well-being and coping and may equip some students to better cope with challenges. This paper examines the association between temperament and character personality profiles with measures of tolerance of ambiguity and with both adaptive and maladaptive constructs of perfectionism.MethodsA self-report questionnaire collected data on a sample of 808 Australian medical students in 2014 and 2015. Personality was measured using the Temperament and Character Inventory (TCIR-140) and classified traits as profiles using a latent class analysis. Two profiles were found. Profile 1 was characterized by low-average levels of Harm Avoidance, and high to very high levels of Persistence, Self-Directedness and Cooperativeness. Moderately-high levels of Harm Avoidance and high levels of Persistence, Self-Directedness and Cooperativeness characterized Profile 2. Moderation regression analyses were conducted to examine the association between the personality profiles with levels of Tolerance of Ambiguity (MSAT-II), Perfectionism-Concern over Mistakes and Perfectionism-High Standards (FMPS), considering demographic characteristics.ResultsStudents with Profile 1 were higher in levels of Tolerance of Ambiguity, and Perfectionism-High Standards, and lower levels of Perfectionism-Concern over Mistakes compared to Profile 2. These findings remained statistically significant after adjusting for age and gender. A significant personality by age interaction on Tolerance of Ambiguity was found. While higher levels of Tolerance of Ambiguity were associated with older age overall, it remained low across age for students with a personality Profile 2.ConclusionsA particular combination of personality traits was identified to be associated with low Tolerance of Ambiguity and high levels of maladaptive Perfectionism. An intolerance of ambiguity and over concern about mistakes may be maladaptive and underlie vulnerability to stress and poor coping. The psychobiological model of personality provides insight into traits that are stable and those that can be self-regulated through education and training. The interaction between biological mechanisms and socio-cultural learning is relevant to a sample of medical students because it accounts for interaction of the biological or innate aspects of their personal development within an intense and competitive learning environment of medical school. creator: Janni Leung creator: C. Robert Cloninger creator: Barry A. Hong creator: Kevin M. Cloninger creator: Diann S. Eley uri: https://doi.org/10.7717/peerj.7109 license: http://creativecommons.org/licenses/by/4.0/ rights: ©2019 Leung et al. title: Capsazepine prolongation of the duration of lidocaine block of sensory transmission in mice may be mediated by modulation of HCN channel currents link: https://peerj.com/articles/7111 last-modified: 2019-06-13 description: Background and objectivesHyperpolarization-activation cyclic nucleotide-gated (HCN) channels contribute to the effects of lidocaine. Capsazepine (CPZ), a competitive inhibitor of capsaicin of transient receptor potential vanilloid-1 channel, has also been found to inhibit HCN channel currents (Ih). This study was designed to investigate whether CPZ could prolong durations of lidocaine in regional anesthesia.MethodsMouse HCN1 and HCN2 channels were expressed in human embryonic kidney 293 (HEK 293) cells. The effect of CPZ on Ih was measured by whole-cell patch-clamping recording. Sciatic nerve block model in mice was used for the study in vivo. The mice were randomly divided into seven groups, respectively, receiving lidocaine, CPZ, ZD7288 (HCN channel blocker), CPZ + lidocaine, ZD7288 + lidocaine, ZD7288 + CPZ + lidocaine, forskolin (an activator of adenylyl cyclase) + CPZ + lidocaine. Regional anesthetic durations of lidocaine were determined. Voltage-gated sodium channel currents (INa) and Ih were recorded in dorsal root ganglion neurons of mice. The effects of CPZ on INa and Ih with or without Cyclic adenosine monophosphate (cAMP) were assessed. Isolated mice sciatic nerve was prepared to evaluate the effect of CPZ on the compound action potentials (CAP).ResultsCapsazepine non-selectively inhibited transfected mHCN1 and mHCN2 channel currents in HEK 293 cells. In sciatic nerve block in vivo, compared to lidocaine alone, adding CPZ extended the durations of lidocaine for noxious sensory block (35.1 ± 3.3 vs. 20.3 ± 1.7 min), tactile sensory block (25.5 ± 4.4 vs. 20.0 ± 3.7 min), thermal sensory block (39.6 ± 6.6 vs. 26.8 ± 5.5 min), and motor function block (28.6 ± 4.1 vs. 20.9 ± 4.2 min). Duration of thermal sensory block was longer in CPZ + lidocaine group than that of ZD7288 + lidocaine group (39.6 ± 6.6 vs. 33.4 ± 4.5 min). Forskolin reversed the prolongation by CPZ on lidocaine durations. CPZ or ZD7288 alone did not produce typical regional anesthetic effects. Increased intracellular concentration of cAMP reversed the inhibition of CPZ on Ih. Although CPZ alone inhibited INa at the concentration more than 30 μM, it did not inhibit the CAP amplitudes in isolated sciatic nerves. CPZ dose-dependently enhanced the inhibitory effect of 1% lidocaine on the CAP amplitudes.ConclusionsCapsazepine may prolong durations of lidocaine in peripheral nerve block by modulation of HCN channel currents. creator: Wenling Zhao creator: Peng Liang creator: Jin Liu creator: Huan Li creator: Daqing Liao creator: Xiangdong Chen creator: Qian Li creator: Cheng Zhou uri: https://doi.org/10.7717/peerj.7111 license: http://creativecommons.org/licenses/by/4.0/ rights: © 2019 Zhao et al. title: Soil respiration and its Q10 response to various grazing systems of a typical steppe in Inner Mongolia, China link: https://peerj.com/articles/7112 last-modified: 2019-06-13 description: BackgroundAs one of the important management practices of grassland ecosystems, grazing has fundamental effects on soil properties, vegetation, and soil microbes. Grazing can thus alter soil respiration (Rs) and the soil carbon cycle, yet its impacts and mechanisms remain unclear.MethodsTo explore the response of soil carbon flux and temperature sensitivity to different grazing systems, Rs, soil temperature (ST), and soil moisture (SM) were observed from December 2014 to September 2015 in a typical steppe of Inner Mongolia under three grazing systems: year-long grazing, rest-rotation grazing, and grazing exclusion. In addition, plant aboveground and root biomass, soil microbial biomass and community composition, and soil nutrients were measured during the pilot period.ResultsSoil respiration was significantly different among the three grazing systems. The average Rs was highest under rest-rotation grazing (1.26 μmol·m−2·s−1), followed by grazing exclusion (0.98 μmol·m−2·s−1) and year-long grazing (0.94 μmol·m−2·s−1). Rs was closely associated with ST, SM, potential substrate and root, and soil microbe activity. The effects of grazing among two grazing systems had generality, but were different due to grazing intensity. The root biomass was stimulated by grazing, and the rest-rotation grazing system resulted in the highest Rs. Grazing led to decreases in aboveground and microbial biomass as well as the loss of soil total nitrogen and total phosphorus from the steppe ecosystem, which explained the negative effect of grazing on Rs in the year-long grazing system compared to the grazing exclusion system. The temperature sensitivity of Rs (Q10) was higher in the rest-rotation and year-long grazing systems, likely due to the higher temperature sensitivity of rhizosphere respiration and higher “rhizosphere priming effect” in the promoted root biomass. The structural equation model analysis showed that while grazing inhibited Rs by reducing soil aeration porosity, ground biomass and SM, it increased Q10 but had a lower effect than other factors. A better understanding of the effects of grazing on soil respiration has important practical implications. creator: Cheng Nie creator: Yue Li creator: Lei Niu creator: Yinghui Liu creator: Rui Shao creator: Xia Xu creator: Yuqiang Tian uri: https://doi.org/10.7717/peerj.7112 license: http://creativecommons.org/licenses/by/4.0/ rights: © 2019 Nie et al. title: Effect of heat-killed Streptococcus thermophilus on type 2 diabetes rats link: https://peerj.com/articles/7117 last-modified: 2019-06-13 description: Background and AimsThe link between gut microbiota and type 2 diabetes (T2D) has been addressed by numerous studies. Streptococcus thermophilus from fermented milk products, has been used as a probiotic in previous research. However, whether heat-killed S. thermophilus can improve the glycemic parameters of diabetic rats remains unanswered. In this study, we evaluated the effect of heat-killed S. thermophilus on T2D model rats and the potential mechanisms of the effect.MethodsZucker diabetic fatty (ZDF) rats were used to generate a diabetic rat model induced by feeding a high-fat diet. Heat-killed S. thermophilus were orally administered to normal and diabetic rats for 12 weeks. Intestinal microbiota analysis, histology analysis, oral glucose tolerance test and measurement of inflammatory factors were performed.ResultsWe found that heat-killed S. thermophilus treatment reduced fasting blood glucose levels and alleviated glucose intolerance and total cholesterol in diabetic ZDF rats. Additionally, heat-killed S. thermophilus increased the interleukin 10 while reducing the levels of lipopolysaccharide, interleukin 6, and tumor necrosis factor-α in diabetic ZDF rats. The heat-killed S. thermophilus treatment can normalize the structure of the intestinal and colon mucosal layer of diabetic rats. The characteristics of the gut microbiota in heat-killed S. thermophilus-treated and control rats were similar. At the genus level, the abundances of beneficial bacteria, including Ruminococcaceae, Veillonella, Coprococcus, and Bamesiella, were all significantly elevated by heat-killed S. thermophilus treatment in ZDF diabetic rats.ConclusionOur study supports the hypothesis that treatment with heat-killed S. thermophilus could effectively improve glycemic parameters in T2D model rats. In addition, the potential mechanisms underlying the protection maybe include changing the composition of gut microbiota, reinforcing the intestinal epithelial barrier and the immunity of the intestinal mucosa, decreasing the level of inflammation, and then reducing the insulin resistance. creator: Xiangyang Gao creator: Fei Wang creator: Peng Zhao creator: Rong Zhang creator: Qiang Zeng uri: https://doi.org/10.7717/peerj.7117 license: http://creativecommons.org/licenses/by/4.0/ rights: © 2019 Gao et al. title: Dynamics of soil properties and fungal community structure in continuous-cropped alfalfa fields in Northeast China link: https://peerj.com/articles/7127 last-modified: 2019-06-13 description: To compensate for the seasonal imbalance between livestock and forage yield in the cold region of Northeast China, alfalfa (Medicago sativa L.) continuous cropping has been widely employed in animal husbandry. However, the effects of continuous cropping of alfalfa on soil properties, including physical, chemical and biological properties, are poorly understood. In this study, we investigated the soil properties and fungal community composition of alfalfa fields under continuous cropping for different time periods (i.e., 1, 2, 6, 9, 12, 13 and 35 years). The results showed that soil moisture, total C, total N, NO3−-N and available K content decreased at less than 10 years of continuous cropping and then increased at more than 10 years of continuous cropping, but soil total P and available P content showed the opposite tendency. The soil fungal community composition determined using Illumina Miseq sequencing showed that continuous cropping increased the fungal alpha diversity and changed the fungal community structure. The relative abundances of Guehomyces and Chaetomium decreased, but the relative abundances of Phaeomycocentrospora and Paecilomyces increased with continuous cropping time. In addition, continuous cropping of alfalfa increased the relative abundances of some plant pathogens, such as Haematonectria haematococca and Cyphellophora sp. Soil total P and available P content were important soil factors affecting the soil fungal community diversity, fungal community structure and the relative abundances of specific fungi in this alfalfa continuous cropping system. creator: Qin Yao creator: Yanxia Xu creator: Xuefeng Liu creator: Junjie Liu creator: Xinyu Huang creator: Weiguang Yang creator: Zhao Yang creator: Lan Lan creator: Jingming Zhou creator: Guanghua Wang uri: https://doi.org/10.7717/peerj.7127 license: http://creativecommons.org/licenses/by/4.0/ rights: © 2019 Yao et al. title: Development of the cephalopod-specific universal primer set and its application for the metabarcoding analysis of planktonic cephalopods in Korean waters link: https://peerj.com/articles/7140 last-modified: 2019-06-13 description: Although spatiotemporal analysis of the cephalopod larvae provides the useful information for the effective management of their resources, it has been difficult mainly due to their low numbers in the mixed zooplankton net samples and difficulty in morphological identification. In order to analyze the planktonic cephalopods using next-generation sequencing (NGS), we have designed a cephalopod-specific universal (CPD) primer set targeting a region covering mitochondrial cytochrome b and ND6 genes based on the currently identified 36 complete cephalopod mitochondrial genome sequences in the GenBank database. The expected amplicon sizes by CPD primers were between 465 and 471 bp, which was applicable to the MiSeq system (Illumina, San Diego, CA, USA). NGS results of pooled DNAs from 8 months (including 739 zooplankton net samples) collected from Korean waters in 2016 showed the exclusive cephalopod sequences with little contaminant sequences supporting the specificity of CPD primer set. Total 47 representative cephalopod haplotypes (seven families and 10 genera) were obtained from 1,439,414 merged reads. Among the total analyzed haplotypes, Watasenia scintillans, Todarodes pacificus, and Sepiola birostrata were the most abundant species in Korean waters. Two “unidentified” clades in order Oegopsida were identified, which was showed less than 90% sequence identity but closely related to Enoploteuthidae and Idiosepiidae, respectively. Monthly changes in proportions of each haplotype were also identified, which may reflect its reproduction and spawning period. The larvae of W. scintillans was dominant from February to June, while high proportions of other cephalopod taxa were also identified from August to November. Only single haplotype was dominant in W. scintillans (Type 2) throughout the year, while two distinct haplotypes showed seasonal differences in T. pacificus. creator: Eun-Bi Kim creator: Soo Rin Lee creator: Chung Il Lee creator: Hyun Park creator: Hyun-Woo Kim uri: https://doi.org/10.7717/peerj.7140 license: http://creativecommons.org/licenses/by/4.0/ rights: © 2019 Kim et al. title: Extraction of polysaccharides from Amaranthus hybridus L. by hot water and analysis of their antioxidant activity link: https://peerj.com/articles/7149 last-modified: 2019-06-13 description: BackgroundAmaranthus hybridus L. is an annual herb that belongs to the Amaranthceae family, a type of multi-purpose grain, vegetable and feed crop that has received considerable attention due to its great economic value. However, the composition of polysaccharides from A. hybridus has rarely been previously reported.MethodsIn this study, the aboveground part of A. hybridus was used as material and polysaccharides were isolated by the hot water extraction method. Two acidic polysaccharides were isolated and purified by the Sevage method and diethylaminoethyl cellulose-32 column chromatography.ResultsTwo acidic polysaccharides were obtained from A. hybridus: AHP-H-1 and AHP-H-2. There were significant differences between the monosaccharide content from each sample according to gas chromatography-mass spectrometer. AHP-H-2 had higher antioxidant activity in vitro than AHP-H-1. The 2,2-diphenyl-1-picrylhydrazyl radical scavenging rate of two mg/mL AHP-H-2 was 80%, its hydroxyl radical scavenging rate was approximately 48.5%, its superoxide anion radical scavenging rate was 85.3% and its reduction ability of Fe3+ was approximately 0.92. The total antioxidant capacity of each milligram of AHP-H-2 was 6.5, which was higher than ascorbic acid.ConclusionThe results of the study promote the effective use of A. hybridus and provide a theoretical basis for its development. creator: Yujia Tang creator: Yirong Xiao creator: Zizhong Tang creator: Weiqiong Jin creator: Yinsheng Wang creator: Hui Chen creator: Huipeng Yao creator: Zhi Shan creator: Tongliang Bu creator: Xiaoli Wang uri: https://doi.org/10.7717/peerj.7149 license: http://creativecommons.org/licenses/by/4.0/ rights: © 2019 Tang et al. title: Age at menarche and depression: results from the NHANES 2005–2016 link: https://peerj.com/articles/7150 last-modified: 2019-06-13 description: ObjectiveThe association between early age at menarche and depression among adolescent girls and adult women has been examined in many studies. However, inconsistent results and limitations such as small sample size, low generalizability, and measurement error exist. We aimed to address these issues to assess the association between age at menarche and depressive symptoms in a nationally representative sample of US women aged 18 years and older.MethodsWe used the 2005–2016 National Health and Nutrition Examination Survey (NHANES) data with a total of 15,674 women aged 18 years and older included in our study. Logistic regression models were used after adjusting for sociodemographic and health-related factors.ResultsThe crude-adjusted model suggests that women with early age of menarche had 1.36 (95% CI [1.16–1.61]) times the odds of current depressive symptoms compared with the normal menarche group, after controlling for age, race/ethnicity, education, poverty income ratio (PIR) and marital status. In the fully-adjusted model, women with early menarche had 1.25 (95% CI [1.05–1.48]) times the odds of current depressive symptoms, after additionally adjusting for smoking status and body mass index (BMI). However, no significant difference was observed between the normal and late menarche groups.ConclusionFurther studies are warranted to determine the causal relationship and mechanisms between early menarche and increased risk of depression. creator: Yun Shen creator: Deepthi S. Varma creator: Yi Zheng creator: Jenny Boc creator: Hui Hu uri: https://doi.org/10.7717/peerj.7150 license: http://creativecommons.org/licenses/by/4.0/ rights: ©2019 Shen et al. title: Investigation of the protein profile of silkworm (Bombyx mori) pupae reared on a well-calibrated artificial diet compared to mulberry leaf diet link: https://peerj.com/articles/6723 last-modified: 2019-06-12 description: BackgroundSilkworm pupae is the main by-product of the sericulture industry with an interesting nutritional profile, especially in terms of proteins. In consideration of its possible use as a food or food ingredient in Western countries, a comparative proteomic experiment has been performed to investigate the differences of the protein profile of male and female silkworm pupae reared on mulberry leaves or on an artificial diet.MethodsThe nutritional profile of lyophilized silkworm pupae in terms of dry matter and ash was evaluated according to the AOAC procedures, the total nitrogen content was determined by a nitrogen analyzer and the silkworm pupae gross energy value was measured using an adiabatic calorimetric bomb. The comparative proteomic analysis was performed on male and female silkworm pupae reared on mulberry leaves or on the artificial diet. Proteins were separated by two-dimensional electrophoresis and, after a multivariate statistical analysis, the differentially expressed proteins were identified by LC-MS/MS.ResultsThe comparative proteomic approach highlighted 47 silkworm pupae proteins differentially expressed comparing diet and gender. PCA analysis showed that seven proteins were more effective in discriminating the sex and five were more effective in discriminating the diet type. In spite of the above-mentioned differences in the silkworm pupae protein profile, no strong alteration of the pupa physiological traits have been demonstrated, suggesting a general silkworm pupae flexibility to adapt to a well-balanced artificial diet. Differences in lipid transport and metabolism were found among the experimental groups, that might have a relevant effect on the timing and on hormone secretion. This aspect may also affect silk production, as univoltine strains are the most productive. The proteomic data provided in this work, may offer a contribution in understanding also the influence of gender and farming strategy on the allergen profile of Bombyx mori, when used as food or as a food ingredient. Female silkworm pupae reared on mulberry leaves seemed to contain lower levels of known allergens than those reared in the other experimental conditions; these findings will have to be taken into account when farming B. mori for food production purposes. However, our results need to be supported by further characterization of the allergenic potential of B. mori. creator: Cristina Lamberti creator: Francesco Gai creator: Simona Cirrincione creator: Marzia Giribaldi creator: Micol Purrotti creator: Marcello Manfredi creator: Emilio Marengo creator: Benedetto Sicuro creator: Alessio Saviane creator: Silvia Cappellozza creator: Maria Gabriella Giuffrida creator: Laura Cavallarin uri: https://doi.org/10.7717/peerj.6723 license: http://creativecommons.org/licenses/by/4.0/ rights: © 2019 Lamberti et al. title: Analysis of microbiota in elderly patients with Acute Cerebral Infarction link: https://peerj.com/articles/6928 last-modified: 2019-06-12 description: Background and AimsRecent evidence suggest that microbiota is associated with almost all major types of diseases, including cardiovascular diseases. However, its role in Acute Cerebral Infarction remains unexplored. It is important to understand the diversity and distribution of gut microbiota (GM) in patients with Acute Cerebral Infarction and the role that GM plays in this type of disease.MethodsWe performed pyrosequencing on the gut microbiota of 40 individuals in order to elucidate whether the composition of the microbiota differs between patients with Acute Cerebral Infarction and healthy controls: Of these individuals, there were 31 with Acute Cerebral Infarction and nine controls. We applied linear regression to calculate the correlation between the gut flora and disease risk factors. Finally, KEGG functional enrichment analysis was conducted to examine the correlation between the gut flora and Acute Cerebral Infarction.ResultsThe overall microbial structure was similar in both the controls and the patients, but the control group had higher relative presence of Blautia obeum while the presence of Streptococcus infantis and Prevotella copri were relatively higher in the patient group. Using linear regression, we found that Blautia obeum was negatively associated with white blood cell count and Streptococcus infantis was positively correlated with creatinine and lipoprotein. The KEGG pathway analysis indicated that the bio-pathways including methane metabolism, lipopolysaccharide synthesis, bacterial secretion, and flagellar assembly of the gut microbiota in the patient group was expressed differently than that of the controls. We identified three differentially expressed gut microbial functions in Acute Cerebral Infarction and found four bacterial pathways that might be related to the development of this disease.ConclusionsOur study identified three abnormally-expressed bacteria—Blautia obeum, Streptococcus infantis, and Prevotella copri—in patients with Acute Cerebral Infarction compared with healthy controls. It reveals a correlation of these bacterial species with Acute Cerebral Infarction as they relate to disease factors and functional pathways. These findings may shed light on the treatment of cerebral infarction because gut microbiota could serve as a potential therapeutic approach for the treatment of cardiovascular and metabolic diseases. creator: Lin Huang creator: Teng Wang creator: Qian Wu creator: Xin Dong creator: Feifei Shen creator: Dong Liu creator: Xiaoxuan Qin creator: Lanyun Yan creator: Qi Wan uri: https://doi.org/10.7717/peerj.6928 license: http://creativecommons.org/licenses/by/4.0/ rights: ©2019 Huang et al.