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2026	Communications in Computer and Information Science Himani Punia, Avani Vyas, Ranjeet Kumar Rout
2025	ProMethylNet: Protein Methylation Site Prediction Based on Multimodal Feature Fusion and Deep Learning IEEE Transactions on Computational Biology and Bioinformatics Sien Feng, Xinyi Qin, Lu Zhang, Xueyun Cheng, Yijun Wang, Chuang Dai
2024	THE 7TH INTERNATIONAL CONFERENCE ON SCIENCE AND TECHNOLOGY (ICST22): Smart innovation research on science and technology for a better life Joko Pebrianto Trinugroho, Faisal Asadi, Bens Pardamean
2024	Hybrid Bayesian Optimization-Based Graphical Discovery for Methylation Sites Prediction IEEE Journal of Biomedical and Health Informatics Lingyan Gu, Tingbo Chen, Jianqiang Li, Yu-An Huang, Zhihua Du, Victor C.M. Leung, Jie Chen
2024	RMSxAI: arginine methylation sites prediction from protein sequences using machine learning algorithms and explainable artificial intelligence Discover Applied Sciences Gaurav Dwivedi, Monika Khandelwal, Ranjeet Kumar Rout, Saiyed Umer, Saurav Mallik, Hong Qin
2024	DeepPRMS: advanced deep learning model to predict protein arginine methylation sites Briefings in Functional Genomics Monika Khandelwal, Ranjeet Kumar Rout
2023	Standard Multi-Layer Perceptron on Positive - Unlabeled Glycosylation Site Dataset Procedia Computer Science Bharuno Mahesworo, Tjeng Wawan Cenggoro, Favorisen Rosyking Lumbanraja, Bens Pardamean
2023	Multivariate Time-Series Deep Learning for Joint Prediction of Temperature and Relative Humidity in a Closed Space Procedia Computer Science Fergianto E. Gunawan, Arief S. Budiman, Bens Pardamean, Endang Juana, Sugiarto Romeli, Tjeng W. Cenggoro, Kartika Purwandari, Alam A. Hidayat, Anak. A.N.P. Redi, Muhammad Asrol
2023	PRMxAI: protein arginine methylation sites prediction based on amino acid spatial distribution using explainable artificial intelligence BMC Bioinformatics Monika Khandelwal, Ranjeet Kumar Rout
2022	Deep Learning with Greedy Layer-Wise Compound Scaling for Temperature and Humidity Prediction in Solar Dryer Dome SSRN Electronic Journal Tjeng Wawan Cenggoro, Gregorius Natanael Elwirehardja, Nicholas Dominic, Karli Eka Setiawan, Reza Rahutomo, Endang Djuana, Fergyanto E. Gunawan, Arief S. Budiman, Sugiarto Romeli, Bens Pardamean
2022	Mini-review: Recent advances in post-translational modification site prediction based on deep learning Computational and Structural Biotechnology Journal Lingkuan Meng, Wai-Sum Chan, Lei Huang, Linjing Liu, Xingjian Chen, Weitong Zhang, Fuzhou Wang, Ke Cheng, Hongyan Sun, Ka-Chun Wong
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