Peer-reviewed Articles

1 citation
216 downloads
1,185 views

The acoustic space in a given environment is filled with footprints arising from three processes: biophony, geophony and anthrophony. Bioacoustic research using passive acoustic sensors can result in thousands of recordings. An important component of processing...

["Bioinformatics","Computational Biology"]
doi:10.7717/peerj-cs.70
3 citations
759 downloads
2,914 views

Three-dimensional (3D) data of many kinds is produced at an increasing rate throughout all scientific disciplines. The Portable Document Format (PDF) is the de-facto standard for the exchange of electronic documents and allows for embedding three-dimensional models....

["Computer Vision","Data Science","Digital Libraries","Emerging Technologies","Scientific Computing and Simulation"]
doi:10.7717/peerj-cs.64
68 citations
1,709 downloads
10,589 views

OncoLnc is a tool for interactively exploring survival correlations, and for downloading clinical data coupled to expression data for mRNAs, miRNAs, or long noncoding RNAs (lncRNAs). OncoLnc contains survival data for 8,647 patients from 21 cancer studies performed...

["Bioinformatics","Computational Biology","Databases"]
doi:10.7717/peerj-cs.67
1 citation
273 downloads
1,584 views

Container-based application deployments have received significant attention in recent years. Operating system virtualization based on containers as a mechanism to deploy and manage complex, large-scale software systems has become a popular mechanism for application...

["Adaptive and Self-Organizing Systems","Distributed and Parallel Computing","Software Engineering"]
doi:10.7717/peerj-cs.66
385 downloads
1,539 views

It is a well-known fact that some criminals follow perpetual methods of operations known as modi operandi. Modus operandi is a commonly used term to describe the habits in committing crimes. These modi operandi are used in relating criminals to crimes for which...

["Algorithms and Analysis of Algorithms","Artificial Intelligence","Data Mining and Machine Learning"]
doi:10.7717/peerj-cs.65
192 downloads
1,207 views

Hypertension or high blood pressure is a condition on the rise. Not only does it affect the elderly but is also increasingly spreading to younger sectors of the population. Treating it involves exhaustive monitoring of patients. A tool adapted to the particular...

["Computer Networks and Communications","Distributed and Parallel Computing"]
doi:10.7717/peerj-cs.69
9 citations
1,321 downloads
2,865 views

Online news reading has become a widely popular way to read news articles from news sources around the globe. With the enormous amount of news articles available, users are easily overwhelmed by information of little interest to them. News recommender systems help...

["Agents and Multi-Agent Systems","World Wide Web and Web Science"]
doi:10.7717/peerj-cs.63
10 citations
566 downloads
2,539 views

Software process improvement (SPI) has been around for decades: frameworks are proposed, success factors are studied, and experiences have been reported. However, the sheer mass of concepts, approaches, and standards published over the years overwhelms practitioners...

["Software Engineering"]
doi:10.7717/peerj-cs.62
3 citations
309 downloads
2,060 views

Ebooks of the future may respond to the emotional experience of the reader. (Neuro-) physiological measures could capture a reader’s emotional state and use this to enhance the reading experience by adding matching sounds or to change the storyline therewith creating...

["Brain-Computer Interface","Human-Computer Interaction","Multimedia"]
doi:10.7717/peerj-cs.60
2 citations
342 downloads
3,530 views

Annotation of bioassay protocols using semantic web vocabulary is a way to make experiment descriptions machine-readable. Protocols are communicated using concise scientific English, which precludes most kinds of analysis by software algorithms. Given the availability...

["Bioinformatics","Computational Biology","Human-Computer Interaction","Data Science"]
doi:10.7717/peerj-cs.61
3 citations
330 downloads
1,578 views

We study the interplay between a dynamical process and the structure of the network on which it unfolds using the parameterized Laplacian framework. This framework allows for defining and characterizing an ensemble of dynamical processes on a network beyond what...

["Network Science and Online Social Networks"]
doi:10.7717/peerj-cs.57
8 citations
260 downloads
1,770 views

Scaling up psychotherapy services such as for addiction counseling is a critical societal need. One challenge is ensuring quality of therapy, due to the heavy cost of manual observational assessment. This work proposes a speech technology-based system to automate...

["Computational Linguistics","Emerging Technologies","Human-Computer Interaction","Natural Language and Speech"]
doi:10.7717/peerj-cs.59
257 downloads
1,376 views

Identifying a temporal pattern of events is a fundamental task of online (real-time) verification. We present efficient schemes for online monitoring of events for identifying desired/undesired patterns of events. The schemes use preprocessing to ensure that the...

["Algorithms and Analysis of Algorithms","Theory and Formal Methods"]
doi:10.7717/peerj-cs.53
4 citations
624 downloads
2,253 views

We consider the problem of detecting and quantifying the periodic component of a function given noise-corrupted observations of a limited number of input/output tuples. Our approach is based on Gaussian process regression, which provides a flexible non-parametric...

["Data Mining and Machine Learning","Optimization Theory and Computation"]
doi:10.7717/peerj-cs.50
1 citation
478 downloads
1,569 views

Matrix Depot is a Julia software package that provides easy access to a large and diverse collection of test matrices. Its novelty is threefold. First, it is extensible by the user, and so can be adapted to include the user’s own test problems. In doing so, it...

["Algorithms and Analysis of Algorithms","Data Science","Scientific Computing and Simulation"]
doi:10.7717/peerj-cs.58

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