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2025
Above‐ and belowground plant pathogens along elevational gradients: patterns and potential mechanisms
Oikos
2025
Investigating fungal diversity through metabarcoding for environmental samples: assessment of ITS1 and ITS2 Illumina sequencing using multiple defined mock communities with different classification methods and reference databases
BMC Genomics
2025
Sarcocystis Cymruensis in the Brown Rat (Rattus Norvegicus) from an Urban District in Kuwait: Detailed Morphologic and Molecular Characterization
Acta Parasitologica
2025
Internal transcribed spacers enable species-level Metataxonomic analysis of ciliated protozoa
ISME Communications
2025
Rain-fed spring maize exhibits growth stability through rhizosphere microbial responses to stover return and organic fertilizer application
Plant and Soil
2025
Investigating the interplay of indoor microbial diversity with pollutant variables and human health profile in Indian slums: a metagenomic approach
Aerobiologia
2025
Protein Coding Low‐Copy rpb2 and ef1‐α Regions Are Viable Fungal Metabarcoding DNA Markers Which Can Supplement ITS for Better Accuracy
Ecology and Evolution
2025
First Report on Antifungal Activity of Metschnikowia pulcherrima Against Ascosphaera apis, the Causative Agent of Chalkbrood Disease in Honeybee (Apis mellifera L.) Colonies
Journal of Fungi
2025
Pomegranate Woody Mycobiota Associated with Wood Decay
Journal of Fungi
2025
Soil microbiome dysbiosis and rhizosphere metabolic dysfunction drive continuous cropping obstacles of Codonopsis tangshen
Frontiers in Microbiology
2025
Advanced rDNA-Based Detection of Wheat Pathogens in Grain Samples Using Next-Generation Sequencing (NGS)
Pathogens
2025
Impact of Post-Harvest Apple Scab on Peel Microbiota, Fermentation Dynamics, and the Volatile/Non-Volatile Composition of Cider
Molecules
2025
Characterization and Health Risk Assessment of Airborne Fungi in a Semiunderground Municipal Wastewater Treatment Plant
Environment & Health
2025
Diversity of Endophytic Fungi in Plant Species: Traditional vs. High‐Throughput Sequencing  Approaches
Chemistry & Biodiversity
2025
Efficiency of the Coriolis µ Air Sampling Device for Fungal Contamination Analysis of Indoor Air: A Case Study
Pathogens
2025
Grand Challenges in Biology and Biotechnology
2024
Distinct fungal microbiomes of two Thai commercial stingless bee species, Lepidotrigona terminata and Tetragonula pagdeni suggest a possible niche separation in a shared habitat
Frontiers in Cellular and Infection Microbiology
2024
Malian Children’s Core Gut Mycobiome
Microorganisms
2024
Soil mycobiome and forest endophytic fungi: Is there a relationship between them?
Forest Ecology and Management
2024
Malassezia yeast population dynamics on the skin of patients living with HIV
Medical Mycology
2024
Characterization of a Polyphenol Oxidase and Lipase Produced by Microbes Derived from Palm Oil Sludge
Current Biotechnology
2024
Understanding diel bioaerosol patterns in mold-affected buildings through metagenomic surveillance
Building and Environment
2024
Targeted Metagenomics Identification of Microbiome in Preschools exposed to air Pollutants and Their Association with Respiratory Health symptom, Allergy and Eczema
Air Quality, Atmosphere & Health
2024
Global diversity and biogeography of Lyophyllum inferred from amplicon datasets
Frontiers in Ecology and Evolution
2024
Storms facilitate airborne DNA from leaf fragments outside the main tree pollen season
Aerobiologia
2024
Oral Microbiome and Subsequent Risk of Head and Neck Squamous Cell Cancer
JAMA Oncology
2023
Advances in the oral microbiota and rapid detection of oral infectious diseases
Frontiers in Microbiology
2023
Fecal Fungal Microbiota (Mycobiome) Study as a Potential Tool for Precision Medicine in Inflammatory Bowel Disease
Gut and Liver
2023
Comprehensive evaluation of shotgun metagenomics, amplicon sequencing, and harmonization of these platforms for epidemiological studies
Cell Reports Methods
2023
Childhood lower respiratory tract infections linked to residential airborne bacterial and fungal microbiota
Environmental Research
2023
To explore strange new worlds – The diversification in Tremella caloplacae was linked to the adaptive radiation of the Teloschistaceae
Molecular Phylogenetics and Evolution
2023
Yeast metagenomics: analytical challenges in the analysis of the eukaryotic microbiome
Microbiome Research Reports
2023
INTERNATIONAL CONFERENCE ON SCIENTIFIC RESEARCH & INNOVATION (ICSRI 2022)
2023
CNN_FunBar: Advanced Learning Technique for Fungi ITS Region Classification
Genes
2023
Role of Fungi in Imparting General Disease Suppressiveness in Soil from Organic Field
Microbial Ecology
2023
Divergent TLR2 and TLR4 Activation by Fungal Spores and Species Diversity in Dust from Waste Sorting Plants
Applied and Environmental Microbiology
2023
Characterizing nrDNA ITS1, 5.8S and ITS2 secondary structures and their phylogenetic utility in the legume tribe Hedysareae with special reference to Hedysarum
PLOS ONE
2023
The Fungal Microbiome of the Upper Airway Is Associated With Future Loss of Asthma Control and Exacerbation Among Children With Asthma
CHEST
2023
ASVmaker: A New Tool to Improve Taxonomic Identifications for Amplicon Sequencing Data
Plants
2023
Cold adapted and closely related mucoraceae species colonise dry-aged beef (DAB)
Fungal Biology
2023
Porcine fungal mock community analyses: Implications for mycobiome investigations
Frontiers in Cellular and Infection Microbiology
2023
FunFun: ITS‐based functional annotator of fungal communities
Ecology and Evolution
2022
A Case Study in Saudi Arabia: Biodiversity of Maize Seed-Borne Pathogenic Fungi in Relation to Biochemical, Physiological, and Molecular Characteristics
Plants
2022
Surface fungal diversity and several mycotoxin-related genes’ expression profiles during the Lunar Palace 365 experiment
Microbiome
2022
Aerosolization Behaviour of Fungi and Its Potential Health Effects during the Composting of Animal Manure
International Journal of Environmental Research and Public Health
2022
Mycobiome detection from a single subterranean gametophyte using metabarcoding techniques
Applications in Plant Sciences
2022
Analysis of Microbiota Persistence in Quebec’s Terroir Cheese Using a Metabarcoding Approach
Microorganisms
2022
Environmental DNA reveals diversity and abundance of Alternaria species in neighbouring heterogeneous landscapes in Worcester, UK
Aerobiologia
2022
The bacterial and fungal microbiomes of ectomycorrhizal roots from stone oaks and Yunnan pines in the subtropical forests of the Ailao Mountains of Yunnan
Frontiers in Microbiology
2022
Morphopathological and Molecular Morphometric Characterization of Waitea circinata var. prodigus Causing a Novel Sheath Spot Disease of Maize in India
Plant Disease
2022
Facilitating the adoption of high‐throughput sequencing technologies as a plant pest diagnostic test in laboratories: A step‐by‐step description
EPPO Bulletin
2022
Detection and Molecular Phylogenetic-Morphometric Characterization of Rhizoctonia tuliparum, Causal Agent of Gray Bulb Rot of Tulips and Bulbous Iris
Journal of Fungi
2022
Comprehensive Evaluation of Shotgun Metagenomics, Amplicon Sequencing and Harmonization of Said Platforms for Epidemiological Studies Using the Large Multi-Center HCHS/SOL Cohort
SSRN Electronic Journal
2022
Fungi Composition in Settled Dust Associated with Fractional Exhaled Nitric Oxide in School Children with Asthma
SSRN Electronic Journal
2022
Airborne fungi and human exposure in different areas of composting facilities
Ecotoxicology and Environmental Safety
2022
Fungi composition in settled dust associated with fractional exhaled nitric oxide in school children with asthma
Science of The Total Environment
2021
The Bad and the Good—Microorganisms in Cultural Heritage Environments—An Update on Biodeterioration and Biotreatment Approaches
Materials
2021
In Silico Study Suggesting the Bias of Primers Choice in the Molecular Identification of Fungal Aerosols
Journal of Fungi
2021
Metagenomic characterization of indoor dust fungal associated with allergy and lung inflammation among school children
Ecotoxicology and Environmental Safety
2021
Fungal community assembly during a high-temperature composting under different pasteurization regimes used to elaborate the Agaricus bisporus substrate
Fungal Biology
2021
Fungal Diversity in Multiple Post-harvest Aged Red Pine Stumps and Their Potential Influence on Heterobasidion Root Rot in Managed Stands Across Minnesota
Frontiers in Fungal Biology
2021
Small-scale variation in a pristine montane cloud forest: evidence on high soil fungal diversity and biogeochemical heterogeneity
PeerJ
2021
Characterization of soils conducive and non-conducive to Prunus replant disease
PLOS ONE
2021
Soil Metabarcoding Offers a New Tool for the Investigation and Hunting of Truffles in Northern Thailand
Journal of Fungi
2021
Terroir Is the Main Driver of the Epiphytic Bacterial and Fungal Communities of Mango Carposphere in Reunion Island
Frontiers in Microbiology
2021
Molecular detection of mycobiota and the associated mycotoxins in rice grains imported into Saudi Arabia
Journal of the Saudi Society of Agricultural Sciences
2021
Encyclopedia of Mycology
2021
Comparison of Culturing and Metabarcoding Methods to Describe the Fungal Endophytic Assemblage of Brachypodium rupestre Growing in a Range of Anthropized Disturbance Regimes
Biology
2021
Yeasts from intertidal zone marine sediment demonstrate antagonistic activities against Botrytis cinerea in vitro and in strawberry fruit
Biological Control
2021
First insight into the environmental microbial communities associated with potentially pathogenic strains in pond cultured tilapia (Oreochromis niloticus) at various growth stages based on 16S, 18S, and ITS2 rRNA gene amplicons sequencing
Aquaculture
2021
Blowing in the wind: Bacteria and fungi are spreading from public restroom hand dryers
Archives of Environmental & Occupational Health
2021
Comparative analyses of sooty mould communities from Brazil and Central Europe
Mycological Progress
2020
Quantitative PCR assay for the simultaneous identification and enumeration of multiple Karenia species
Environmental Science and Pollution Research
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