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Daniel Suárez-Barrera, Lucas Bayones, Norberto Encinas-Rodríguez, Sergio Parra, Viktor Monroy, Sebastián Pujalte, Bernardo Andrade-Ortega, Héctor Díaz, Manuel Alvarez, Antonio Zainos, Alessio Franci, Román Rossi-Pool

Qingyuan Liu, Yongbin Wei, Dongxu Liu, Ting Qi, Kun Zhao, Ya-Hong Zhang, Long-Biao Cui, Yong Liu, Martijn P. van den Heuvel

Adrian Allen, Zhengwu Zhang, Andrew Nobel

Nina Braad Iskov, Anders Stevnhoved Olsen, Kristoffer Hougaard Madsen, Morten Mørup

Elisabeth Paté‐Cornell

Soyun Park, Jihnhee Yu, Zohi Sternberg

Ajay Nemani, Mark J. Lowe

Pantea Moghimi, Anh The Dang, Quan Do, Theoden I. Netoff, Kelvin O. Lim, Gowtham Atluri

Da Zhi, Maedbh King, Carlos R. Hernandez‐Castillo, Jörn Diedrichsen

Kristoffer Jon Albers, Matthew G. Liptrot, Karen Sandø Ambrosen, Rasmus Røge, Tue Herlau, Kasper Winther Andersen, Hartwig R. Siebner, Lars Kai Hansen, Tim B. Dyrby, Kristoffer H. Madsen, Mikkel N. Schmidt, Morten Mørup

Francesca Bottino, Martina Lucignani, Luca Pasquini, Michele Mastrogiovanni, Simone Gazzellini, Matteo Ritrovato, Daniela Longo, Lorenzo Figà-Talamanca, Maria Camilla Rossi Espagnet, Antonio Napolitano

Kaixin Li, Lingzhong Fan, Yue Cui, Xuehu Wei, Yini He, Jiyue Yang, Yuheng Lu, Wen Li, Weiyang Shi, Long Cao, Luqi Cheng, Ang Li, Bo You, Tianzi Jiang

Sage Hahn, Max M Owens, DeKang Yuan, Anthony C Juliano, Alexandra Potter, Hugh Garavan, Nicholas Allgaier

Leila Baghaarabani, Sama Goliaei, Mohammad-Hadi Foroughmand-Araabi, Seyed Peyman Shariatpanahi, Bahram Goliaei

Kristoffer J. Albers, Karen S. Ambrosen, Matthew G. Liptrot, Tim B. Dyrby, Mikkel N. Schmidt, Morten Mørup

Kean Ming Tan, Junwei Lu, Tong Zhang, Han Liu

Cong Ma, Junwei Lu, Han Liu

Kristian M. Eschenburg, Thomas J. Grabowski, David R. Haynor

Nessa V. Bryce, John C. Flournoy, João F. Guassi Moreira, Maya L. Rosen, Kelly A. Sambook, Patrick Mair, Katie A. McLaughlin

Allam S. Hassanein, Mohamed E. Hussein, Walid Gomaa, Yasushi Makihara, Yasushi Yagi

Zhiguo Luo, Ling-Li Zeng, Jian Qin, Chenping Hou, Hui Shen, Dewen Hu

Hiroki Kurashige, Jun Kaneko, Yuichi Yamashita, Rieko Osu, Yohei Otaka, Takashi Hanakawa, Manabu Honda, Hideaki Kawabata

David Hunt, Manjiri Dighe, Christopher Gatenby, Colin Studholme

Karen S. Ambrosen, Simon F. Eskildsen, Max Hinne, Kristine Krug, Henrik Lundell, Mikkel N. Schmidt, Marcel A.J. van Gerven, Morten Mørup, Tim B. Dyrby

Reza Arfa, Rubiyah Yusof, Parvaneh Shabanzadeh

Mor Regev, Erez Simony, Katherine Lee, Kean Ming Tan, Janice Chen, Uri Hasson

Fabrizio Falasca, Annalisa Bracco, Athanasios Nenes, Ilias Fountalis

David Hunt, Manjiri Dighe, Christopher Gatenby, Colin Studholme

Xiaoluan Xia, Lingzhong Fan, Bing Hou, Baogui Zhang, Dan Zhang, Chen Cheng, Hongxia Deng, Yunyun Dong, Xudong Zhao, Haifang Li, Tianzi Jiang

Ilias Fountalis, Constantine Dovrolis, Bistra Dilkina, Shella Keilholz

Ilias Fountalis, Constantine Dovrolis, Annalisa Bracco, Bistra Dilkina, Shella Keilholz

Richard F. Betzel, John D. Medaglia, Danielle S. Bassett

Salim Arslan, Sofia Ira Ktena, Antonios Makropoulos, Emma C. Robinson, Daniel Rueckert, Sarah Parisot

Daniel Moyer, Boris A. Gutman, Neda Jahanshad, Paul M. Thompson

Xiaoluan Xia, Lingzhong Fan, Chen Cheng, Simon B. Eickhoff, Junjie Chen, Haifang Li, Tianzi Jiang

Sarah Parisot, Ben Glocker, Sofia Ira Ktena, Salim Arslan, Markus D. Schirmer, Daniel Rueckert

Ronald J. Janssen, Pasi Jylänki, Marcel A. J. van Gerven

Christopher Baldassano, Andre Esteva, Li Fei-Fei, Diane M. Beck

Christopher Baldassano, Diane M. Beck, Li Fei-Fei

Sneha Pandya, Amy Kuceyeski, Ashish Raj

2025	Efficient and reliable spike sorting from neural recordings with UMAP-based unsupervised nonlinear dimensionality reduction PLOS Biology Daniel Suárez-Barrera, Lucas Bayones, Norberto Encinas-Rodríguez, Sergio Parra, Viktor Monroy, Sebastián Pujalte, Bernardo Andrade-Ortega, Héctor Díaz, Manuel Alvarez, Antonio Zainos, Alessio Franci, Román Rossi-Pool
2025	Harmonizing network-based statistics across different atlases in brain connectome analysis Communications Biology Qingyuan Liu, Yongbin Wei, Dongxu Liu, Ting Qi, Kun Zhao, Ya-Hong Zhang, Long-Biao Cui, Yong Liu, Martijn P. van den Heuvel
2024	CoCoNest: A continuous structural connectivity-based nested family of parcellations of the human cerebral cortex Network Neuroscience Adrian Allen, Zhengwu Zhang, Andrew Nobel
2024	Discovering prominent differences in structural and functional connectomes using a multinomial stochastic block model Network Neuroscience Nina Braad Iskov, Anders Stevnhoved Olsen, Kristoffer Hougaard Madsen, Morten Mørup
2024	Preferences in AI algorithms: The need for relevant risk attitudes in automated decisions under uncertainties Risk Analysis Elisabeth Paté‐Cornell
2024	Multi-Dimensional Clustering Based on Restricted Distance-Dependent Mixture Dirichlet Process for Diffusion Tensor Imaging Journal of Data Science Soyun Park, Jihnhee Yu, Zohi Sternberg
2022	Cohesive parcellation of the human brain using resting-state fMRI Journal of Neuroscience Methods Ajay Nemani, Mark J. Lowe
2022	Evaluation of functional MRI-based human brain parcellation: a review Journal of Neurophysiology Pantea Moghimi, Anh The Dang, Quan Do, Theoden I. Netoff, Kelvin O. Lim, Gowtham Atluri
2022	Evaluating brain parcellations using the distance‐controlled boundary coefficient Human Brain Mapping Da Zhi, Maedbh King, Carlos R. Hernandez‐Castillo, Jörn Diedrichsen
2022	Uncovering Cortical Units of Processing From Multi-Layered Connectomes Frontiers in Neuroscience Kristoffer Jon Albers, Matthew G. Liptrot, Karen Sandø Ambrosen, Rasmus Røge, Tue Herlau, Kasper Winther Andersen, Hartwig R. Siebner, Lars Kai Hansen, Tim B. Dyrby, Kristoffer H. Madsen, Mikkel N. Schmidt, Morten Mørup
2022	Spatial Stability of Functional Networks: A Measure to Assess the Robustness of Graph-Theoretical Metrics to Spatial Errors Related to Brain Parcellation Frontiers in Neuroscience Francesca Bottino, Martina Lucignani, Luca Pasquini, Michele Mastrogiovanni, Simone Gazzellini, Matteo Ritrovato, Daniela Longo, Lorenzo Figà-Talamanca, Maria Camilla Rossi Espagnet, Antonio Napolitano
2022	The human mediodorsal thalamus: Organization, connectivity, and function NeuroImage Kaixin Li, Lingzhong Fan, Yue Cui, Xuehu Wei, Yini He, Jiyue Yang, Yuheng Lu, Wen Li, Weiyang Shi, Long Cao, Luqi Cheng, Ang Li, Bo You, Tianzi Jiang
2022	Performance scaling for structural MRI surface parcellations: a machine learning analysis in the ABCD Study Cerebral Cortex Sage Hahn, Max M Owens, DeKang Yuan, Anthony C Juliano, Alexandra Potter, Hugh Garavan, Nicholas Allgaier
2021	Conifer: clonal tree inference for tumor heterogeneity with single-cell and bulk sequencing data BMC Bioinformatics Leila Baghaarabani, Sama Goliaei, Mohammad-Hadi Foroughmand-Araabi, Seyed Peyman Shariatpanahi, Bahram Goliaei
2021	Using connectomics for predictive assessment of brain parcellations NeuroImage Kristoffer J. Albers, Karen S. Ambrosen, Matthew G. Liptrot, Tim B. Dyrby, Mikkel N. Schmidt, Morten Mørup
2021	Estimating and inferring the maximum degree of stimulus‐locked time‐varying brain connectivity networks Biometrics Kean Ming Tan, Junwei Lu, Tong Zhang, Han Liu
2021	Inter-Subject Analysis: A Partial Gaussian Graphical Model Approach Journal of the American Statistical Association Cong Ma, Junwei Lu, Han Liu
2021	Learning Cortical Parcellations Using Graph Neural Networks Frontiers in Neuroscience Kristian M. Eschenburg, Thomas J. Grabowski, David R. Haynor
2021	Brain parcellation selection: An overlooked decision point with meaningful effects on individual differences in resting-state functional connectivity NeuroImage Nessa V. Bryce, John C. Flournoy, João F. Guassi Moreira, Maya L. Rosen, Kelly A. Sambook, Patrick Mair, Katie A. McLaughlin
2020	Identifying motion pathways in highly crowded scenes: A non-parametric tracklet clustering approach Computer Vision and Image Understanding Allam S. Hassanein, Mohamed E. Hussein, Walid Gomaa, Yasushi Makihara, Yasushi Yagi
2020	Functional Parcellation of Human Brain Precuneus Using Density-Based Clustering Cerebral Cortex Zhiguo Luo, Ling-Li Zeng, Jian Qin, Chenping Hou, Hui Shen, Dewen Hu
2020	Revealing Relationships Among Cognitive Functions Using Functional Connectivity and a Large-Scale Meta-Analysis Database Frontiers in Human Neuroscience Hiroki Kurashige, Jun Kaneko, Yuichi Yamashita, Rieko Osu, Yohei Otaka, Takashi Hanakawa, Manabu Honda, Hideaki Kawabata
2020	Automatic, Age Consistent Reconstruction of the Corpus Callosum Guided by Coherency From In Utero Diffusion-Weighted MRI IEEE Transactions on Medical Imaging David Hunt, Manjiri Dighe, Christopher Gatenby, Colin Studholme
2020	Validation of structural brain connectivity networks: The impact of scanning parameters NeuroImage Karen S. Ambrosen, Simon F. Eskildsen, Max Hinne, Kristine Krug, Henrik Lundell, Mikkel N. Schmidt, Marcel A.J. van Gerven, Morten Mørup, Tim B. Dyrby
2019	Novel trajectory clustering method based on distance dependent Chinese restaurant process PeerJ Computer Science Reza Arfa, Rubiyah Yusof, Parvaneh Shabanzadeh
2019	Propagation of Information Along the Cortical Hierarchy as a Function of Attention While Reading and Listening to Stories Cerebral Cortex Mor Regev, Erez Simony, Katherine Lee, Kean Ming Tan, Janice Chen, Uri Hasson
2019	Dimensionality Reduction and Network Inference for Climate Data Using δ‐MAPS: Application to the CESM Large Ensemble Sea Surface Temperature Journal of Advances in Modeling Earth Systems Fabrizio Falasca, Annalisa Bracco, Athanasios Nenes, Ilias Fountalis
2019	Challenges and Opportunities in Connectome Construction and Quantification in the Developing Human Fetal Brain Topics in Magnetic Resonance Imaging David Hunt, Manjiri Dighe, Christopher Gatenby, Colin Studholme
2019	Fine-Grained Parcellation of the Macaque Nucleus Accumbens by High-Resolution Diffusion Tensor Tractography Frontiers in Neuroscience Xiaoluan Xia, Lingzhong Fan, Bing Hou, Baogui Zhang, Dan Zhang, Chen Cheng, Hongxia Deng, Yunyun Dong, Xudong Zhao, Haifang Li, Tianzi Jiang
2018	Studies in Computational Intelligence Ilias Fountalis, Constantine Dovrolis, Bistra Dilkina, Shella Keilholz
2018	δ-MAPS: from spatio-temporal data to a weighted and lagged network between functional domains Applied Network Science Ilias Fountalis, Constantine Dovrolis, Annalisa Bracco, Bistra Dilkina, Shella Keilholz
2018	Diversity of meso-scale architecture in human and non-human connectomes Nature Communications Richard F. Betzel, John D. Medaglia, Danielle S. Bassett
2018	Human brain mapping: A systematic comparison of parcellation methods for the human cerebral cortex NeuroImage Salim Arslan, Sofia Ira Ktena, Antonios Makropoulos, Emma C. Robinson, Daniel Rueckert, Sarah Parisot
2017	Lecture Notes in Computer Science Daniel Moyer, Boris A. Gutman, Neda Jahanshad, Paul M. Thompson
2017	Lecture Notes in Computer Science Daniel Moyer, Boris A. Gutman, Neda Jahanshad, Paul M. Thompson
2017	Multimodal connectivity‐based parcellation reveals a shell‐core dichotomy of the human nucleus accumbens Human Brain Mapping Xiaoluan Xia, Lingzhong Fan, Chen Cheng, Simon B. Eickhoff, Junjie Chen, Haifang Li, Tianzi Jiang
2017	A flexible graphical model for multi-modal parcellation of the cortex NeuroImage Sarah Parisot, Ben Glocker, Sofia Ira Ktena, Salim Arslan, Markus D. Schirmer, Daniel Rueckert
2016	Let’s Not Waste Time: Using Temporal Information in Clustered Activity Estimation with Spatial Adjacency Restrictions (CAESAR) for Parcellating FMRI Data PLOS ONE Ronald J. Janssen, Pasi Jylänki, Marcel A. J. van Gerven
2016	Two Distinct Scene-Processing Networks Connecting Vision and Memory eneuro Christopher Baldassano, Andre Esteva, Li Fei-Fei, Diane M. Beck
2016	Inferring Individual-Level Variations in the Functional Parcellation of the Cerebral Cortex IEEE Transactions on Biomedical Engineering
2016	Human–Object Interactions Are More than the Sum of Their Parts Cerebral Cortex Christopher Baldassano, Diane M. Beck, Li Fei-Fei
2016	The Brain’s Structural Connectome Mediates the Relationship between Regional Neuroimaging Biomarkers in Alzheimer’s Disease Journal of Alzheimer's Disease Sneha Pandya, Amy Kuceyeski, Ashish Raj
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