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2025
Mitogenomes of mosquito species of Harris County in Texas
Scientific Reports
2025
Large-scale comparative analysis of blowfly mitogenomes, with an emphasis on Calliphorinae (Diptera: Calliphoridae), provides evolutionary insights into mitochondrial DNA structure, gene rearrangements, and inter- and intra-subfamilial relationships among blowflies
International Journal of Biological Macromolecules
2025
Genome and Metagenome Skimming: Future Sequencing Methods for Environmental DNA (eDNA) Studies
Molecular Ecology Resources
2025
Genome Skimming of Thysanoptera (Arthropoda, Insecta) and Its Taxonomic and Systematic Applications
Diversity
2025
Genome skimming for improved phylogenetics of Taiwanese phasmids (Insecta: Phasmatodea)
Molecular Phylogenetics and Evolution
2025
MitoCOMON: whole mitochondrial DNA sequencing by primer design and long overlapping amplicon assembly
BMC Genomics
2025
Towards an optimised strategy for reintroducing sea sturgeons (Acipenser sturio and A. oxyrinchus) to Europe
Biodiversity and Conservation
2025
Fluid-preserved zoological specimens in Portuguese Natural History collections: a historical overview and implications to collection management and research
Natural History Collections and Museomics
2025
Complete mitochondrial genomes of the Eastern lowland olingo (Bassaricyon alleni), ringtail (Bassariscus astutus), white-nosed coati (Nasua narica), and crab-eating raccoon (Procyon cancrivorus) elucidate the phylogeny of the Procyonidae
Frontiers in Ecology and Evolution
2025
Diversity and phylogenetic position of the amphi-American lineages of the tapeworms of the genus Anthocephalum Linton, 1890 (Rhinebothriidea: Anthocephaliidae)
Zootaxa
2025
Combination of Sample Preservation Approaches and DNA Extraction Methods for Long‐Read Sequencing of Nudibranchs' Genomes
Ecology and Evolution
2025
A novel freshwater‐adapted genus revealed: Integrative taxonomy and biogeography of freshwater razor clams (Bivalvia: Pharidae) in East Asia
Zoologica Scripta
2025
A revision of the hitherto neglected genus Topiris Walker, 1863 (Lepidoptera, Xyloryctidae) with taxonomic notes on the genus Athrypsiastis Meyrick, 1910
ZooKeys
2024
Extensive transcriptome data providing great efficacy in genetic research and adaptive gene discovery: a case study of Elymus sibiricus L. (Poaceae, Triticeae)
Frontiers in Plant Science
2024
The complete mitochondrial genome of Brachytarsina amboinensis (Diptera: Hippoboscoidea: Streblidae) provides new insights into phylogenetic relationships of Hippoboscoidea
Bulletin of Entomological Research
2024
Species delimitation and phylogenetic relationships of the Prionospio complex (Annelida, Spionidae) in the Northeast Atlantic
Zoologica Scripta
2024
Skimming genomes for systematics and DNA barcodes of corals
Ecology and Evolution
2024
Cryptic diversity patterns of subterranean estuaries
Proceedings of the Royal Society B: Biological Sciences
2024
Phylogeny of the cestode family Escherbothriidae (Cestoda: Rhinebothriidea) reveals unexpected patterns of association with skate hosts
Invertebrate Systematics
2024
Skimming the skaters: genome skimming improves phylogenetic resolution of Halobatinae (Hemiptera: Gerridae)
Insect Systematics and Diversity
2024
The complete mitogenome of the Cape fox, Vulpes chama (Canidae: Mammalia)
Frontiers in Ecology and Evolution
2024
A review of sharks museomic: Management and conservation insight from shark and ray specimens from museum collection
BIO Web of Conferences
2024
Encyclopedia of Food Safety
2023
The complete mitochondrial genome of Phthiridium szechuanum (Nycteribiidae, Diptera)
Mitochondrial DNA Part B
2023
Comparative mitogenomics of native European and alien Ponto-Caspian amphipods
NeoBiota
2023
Systematics of Mukdenia and Oresitrophe (Saxifragaceae): Insights from genome skimming data
Journal of Systematics and Evolution
2023
Integrative taxonomy approach to detect spatial and temporal variability of the Mediterranean benthic communities through artificial substrate units (ASUs)
Frontiers in Marine Science
2023
Phylogenomic study of Amorphophallus (Alismatales; Araceae): When plastid DNA gene sequences help to resolve the backbone subgeneric delineation
Journal of Systematics and Evolution
2023
Species richness of bat flies and their associations with host bats in a subtropical East Asian region
Parasites & Vectors
2023
Mining various genomic resources to resolve old alpha-taxonomy questions: A test of the species hypothesis of the Proteocephalus longicollis species complex (Cestoda: Platyhelminthes) from salmonid fishes
International Journal for Parasitology
2023
Creating, curating and evaluating a mitogenomic reference database to improve regional species identification using environmental DNA
Molecular Ecology Resources
2023
The complete mitochondrial genome of Nycteribia formosana (Diptera, Nycteribiidae)
Mitochondrial DNA Part B
2023
Museomics and phylogenomics of lovebirds (Psittaciformes, Psittaculidae, Agapornis) using low-coverage whole-genome sequencing
Molecular Phylogenetics and Evolution
2023
REFMAKER: Make your own reference to target nuclear loci in low coverage genome skimming libraries. Phylogenomic application in Sapotaceae
Molecular Phylogenetics and Evolution
2023
Updated phylogeny of Vestimentifera (Siboglinidae, Polychaeta, Annelida) based on mitochondrial genomes, with a new species
Molecular Phylogenetics and Evolution
2023
Complete mitochondrial genome of Penicillidia jenynsii (Diptera: Hippoboscoidea: Nycteribiidae) and phylogenetic relationship
Parasitology
2023
Complete mitogenome of Nycteribia allotopa Speiser, 1901 (Diptera, Hippoboscoidea, Nycteribiidae) and comparative analysis of mitochondrial genomes of Nycteribiidae
Parasitology International
2023
Evaluation of genome skimming to detect and characterise human and livestock helminths
International Journal for Parasitology
2023
The complete mitochondrial genome of the freshwater crab Tzotzilthelphusa villarosalensis Villalobos & Álvarez, 2013 (Brachyura: Decapoda: Pseudothelphusidae: Raddausinae) from Mexico
Journal of Crustacean Biology
2023
The complete mitochondrial genome of Nycteribia parvula Speiser, 1901 (Diptera, Nycteribiidae)
Mitochondrial DNA Part B
2023
The complete mitochondrial genome and phylogenetic characterization of two putative subspecies of golden jackal (Canis aureus cruesemanni and Canis aureus moreotica)
Gene
2022
The complete mitochondrial genomes of Notiophilus quadripunctatus Dejean, 1826 and Omophron limbatum (Fabricius, 1777): New insights into the mitogenome phylogeny of the Carabidae (Insecta, Coleoptera)
Insect Systematics & Evolution
2022
Genome skimming approach reveals the gene arrangements in the chloroplast genomes of the highly endangered Crocus L. species: Crocus istanbulensis (B.Mathew) Rukšāns
PLOS ONE
2022
Revised phylogeny from complete mitochondrial genomes of phyllostomid bats resolves subfamilial classification
Zoological Journal of the Linnean Society
2022
Skimming for barcodes: rapid production of mitochondrial genome and nuclear ribosomal repeat reference markers through shallow shotgun sequencing
PeerJ
2022
Fish tapeworms (Cestoda) in the molecular era: achievements, gaps and prospects
Parasitology
2022
The complete mitochondrial genome of Ornithomya biloba (Diptera, Hippoboscidae)
Mitochondrial DNA Part B
2022
High-Throughput Sequencing for Life-History Sorting and for Bridging Reference Sequences in Marine Gerromorpha (Insecta: Heteroptera)
Insect Systematics and Diversity
2022
High-throughput degraded DNA sequencing of subfossil shells of a critically endangered stenoendemic land snail in the Aegean
Molecular Phylogenetics and Evolution
2022
Utilisation of Oxford Nanopore sequencing to generate six complete gastropod mitochondrial genomes as part of a biodiversity curriculum
Scientific Reports
2022
Molecular phylogeny of Allodia (Diptera: Mycetophilidae) constructed using genome skimming
Systematic Entomology
2022
ORTHOSKIM: In silico sequence capture from genomic and transcriptomic libraries for phylogenomic and barcoding applications
Molecular Ecology Resources
2021
Extension of Mitogenome Enrichment Based on Single Long-Range PCR: mtDNAs and Putative Mitochondrial-Derived Peptides of Five Rodent Hibernators
Frontiers in Genetics
2021
Genomic skimming and nanopore sequencing uncover cryptic hybridization in one of world’s most threatened primates
Scientific Reports
2021
Mitogenomics and the Phylogeny of Mantis Shrimps (Crustacea: Stomatopoda)
Diversity
2021
Mining museums for historical DNA: advances and challenges in museomics
Trends in Ecology & Evolution
2021
Comparative Characterization of Mitogenomes From Five Orders of Cestodes (Eucestoda: Tapeworms)
Frontiers in Genetics
2021
DNA barcoding enhances large-scale biodiversity initiatives for deep-pelagic crustaceans within the Gulf of Mexico and adjacent waters
Journal of Crustacean Biology
2021
CONSULT: accurate contamination removal using locality-sensitive hashing
NAR Genomics and Bioinformatics
2020
Molecular identification and geographic origin of a post-Medieval elephant finding from southwestern Portugal using high-throughput sequencing
Scientific Reports
2020
Three New Species of Rhinebothrium (Cestoda: Rhinebothriidea) from the Leopard Whipray, Himantura leoparda , in Australia
Journal of Parasitology
2020
Lecture Notes in Computer Science
2020
Recent advances in understanding mitochondrial genome diversity
F1000Research
2020
Characteristics of Organellar Genomes and Nuclear Internal Transcribed Spacers in the Tertiary Relict Genus Dipelta and Their Phylogenomic Implications
Frontiers in Genetics
2020
Culicidae evolutionary history focusing on the Culicinae subfamily based on mitochondrial phylogenomics
Scientific Reports
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