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2024
Update on the Basic Understanding of Fusarium graminearum Virulence Factors in Common Wheat Research
Plants
2024
The genome of Salmacisia buchloëana, the parasitic puppet master pulling strings of sexual phenotypic monstrosities in buffalograss
G3: Genes, Genomes, Genetics
2024
Analysis of five near-complete genome assemblies of the tomato pathogen Cladosporium fulvum uncovers additional accessory chromosomes and structural variations induced by transposable elements effecting the loss of avirulence genes
BMC Biology
2024
The massive 340 megabase genome of Anisogramma anomala, a biotrophic ascomycete that causes eastern filbert blight of hazelnut
BMC Genomics
2024
Chromosome-Level Assemblies for the Pine Pitch Canker Pathogen Fusarium circinatum
Pathogens
2024
GWAS reveals a rapidly evolving candidate avirulence effector in the Cercospora leaf spot pathogen
Molecular Plant Pathology
2023
CRISPR-Cas9 Gene Editing and Secondary Metabolite Screening Confirm Fusarium graminearum C16 Biosynthetic Gene Cluster Products as Decalin-Containing Diterpenoid Pyrones
Journal of Fungi
2023
Identification and specificity validation of unique and antimicrobial resistance genes to trace suspected pathogenic AMR bacteria and to monitor the development of AMR in non-AMR strains in the environment and clinical settings
Saudi Journal of Biological Sciences
2023
Investigating the origin of subtelomeric and centromeric AT-rich elements in Aspergillus flavus
PLOS ONE
2023
Origins of lineage‐specific elements via gene duplication, relocation, and regional rearrangement in Neurospora crassa
Molecular Ecology
2023
Chromosome-level analysis of the Colletotrichum graminicola genome reveals the unique characteristics of core and minichromosomes
Frontiers in Microbiology
2023
Genome-scale phylogeny and comparative genomics of the fungal order Sordariales
Molecular Phylogenetics and Evolution
2023
Recent transposable element bursts are associated with the proximity to genes in a fungal plant pathogen
PLOS Pathogens
2023
Intraspecific Variation of Transposable Elements Reveals Differences in the Evolutionary History of Fungal Phytopathogen Pathotypes
Genome Biology and Evolution
2023
Stepwise recombination suppression around the mating-type locus in an ascomycete fungus with self-fertile spores
PLOS Genetics
2022
Comparative Genomics of Fusarium circinatum Isolates Used to Screen Southern Pines for Pitch Canker Resistance
Molecular Plant-Microbe Interactions®
2022
The pangenome of the wheat pathogen Pyrenophora tritici-repentis reveals novel transposons associated with necrotrophic effectors ToxA and ToxB
BMC Biology
2022
Publicly Available and Validated DNA Reference Sequences Are Critical to Fungal Identification and Global Plant Protection Efforts: A Use-Case inColletotrichum
Plant Disease
2022
De Novo Long-Read Whole-Genome Assemblies and the Comparative Pan-Genome Analysis of Ascochyta Blight Pathogens Affecting Field Pea
Journal of Fungi
2022
A chromosome-scale genome assembly of the tomato pathogen Cladosporium fulvum reveals a compartmentalized genome architecture and the presence of a dispensable chromosome
Microbial Genomics
2022
Tracking of Diversity and Evolution in the Brown Rot Fungi Monilinia fructicola, Monilinia fructigena, and Monilinia laxa
Frontiers in Microbiology
2022
Identification and Characterization of a QTL for Growth of Fusarium circinatum on Pine-Based Medium
Journal of Fungi
2022
Histone H3K27 Methylation Perturbs Transcriptional Robustness and Underpins Dispensability of Highly Conserved Genes in Fungi
Molecular Biology and Evolution
2022
Giant Starship Elements Mobilize Accessory Genes in Fungal Genomes
Molecular Biology and Evolution
2021
Unique patterns of mating pheromone presence and absence could result in the ambiguous sexual behaviors of Colletotrichum species
G3
2021
Remarkable recent changes in the genetic diversity of the avirulence gene AvrStb6 in global populations of the wheat pathogen Zymoseptoria tritici
Molecular Plant Pathology
2021
Chromosome-level genomes provide insights into genome evolution, organization and size in Epichloe fungi
Genomics
2021
Historical genomics reveals the evolutionary mechanisms behind multiple outbreaks of the host-specific coffee wilt pathogen Fusarium xylarioides
BMC Genomics
2021
Transposable Elements Contribute to Genome Dynamics and Gene Expression Variation in the Fungal Plant PathogenVerticillium dahliae
Genome Biology and Evolution
2021
Genome-Wide Analyses of Repeat-Induced Point Mutations in the Ascomycota
Frontiers in Microbiology
2021
Rapid sequence evolution driven by transposable elements at a virulence locus in a fungal wheat pathogen
BMC Genomics
2021
Increased abundance of secreted hydrolytic enzymes and secondary metabolite gene clusters define the genomes of latent plant pathogens in the Botryosphaeriaceae
BMC Genomics
2021
Whole-Genome Comparisons of Ergot Fungi Reveals the Divergence and Evolution of Species within the Genus Claviceps Are the Result of Varying Mechanisms Driving Genome Evolution and Host Range Expansion
Genome Biology and Evolution
2021
Dynamics of transposable elements in recently diverged fungal pathogens: lineage-specific transposable element content and efficiency of genome defenses
G3 Genes|Genomes|Genetics
2020
Genome comparisons suggest an association between Ceratocystis host adaptations and effector clusters in unique transposable element families
Fungal Genetics and Biology
2020
Retrieving forensic information about the donor through bacterial profiling
International Journal of Legal Medicine
2019
Repeat-Induced Point Mutations Drive Divergence between Fusarium circinatum and Its Close Relatives
Pathogens
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