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2025
Shiga toxin-producing Escherichia coli illness in Aotearoa | New Zealand, 2016-2022: epidemiological, genomic and traditional typing analyses provide insight into a significant endemic disease while highlighting knowledge gaps
Frontiers in Microbiology
2025
Evaluation of the AllplexTM stx1/2/2a/2d Typing (ASTXT) assay for the diagnosis and typing of Shiga toxin-producing Escherichia coli
Diagnostic Microbiology and Infectious Disease
2025
Prevalence of Shiga Toxin-Producing Escherichia coli (STEC) and Risk Characterization Based on Virulence Genes in Retail Raw Ground Meat of Beef, Veal, and Lamb in Canada
Journal of Food Protection
2024
A Comprehensive Review on Shiga Toxin Subtypes and Their Niche-Related Distribution Characteristics in Shiga-Toxin-Producing E. coli and Other Bacterial Hosts
Microorganisms
2024
Genomic analysis of an outbreak of Shiga toxin-producing Escherichia coli O183:H18 in the United Kingdom, 2023
Microbial Genomics
2024
Clinical and public health implications of increasing notifications of LEE-negative Shiga toxin-producing Escherichia coli in England, 2014–2022
Journal of Medical Microbiology
2024
Pathogenomes and virulence profiles of representative big six non-O157 serogroup Shiga toxin-producing Escherichia coli
Frontiers in Microbiology
2024
Genotypic analysis of Shiga toxin-producing Escherichia coli clonal complex 17 in England and Wales, 2014–2022
Journal of Medical Microbiology
2024
Detection of Escherichia coli O157:H7 in Ground Beef Using Long-Read Sequencing
Foods
2023
Analysis of Escherichia coli O157 strains in cattle and humans between Scotland and England & Wales: implications for human health
Microbial Genomics
2023
First molecular characterization of Escherichia coli O157:H7 isolates from clinical samples in Paraguay using whole-genome sequencing
Revista Argentina de Microbiología
2023
Prevalence of Shiga Toxin-Producing Escherichia coli O157 in Wild Scottish Deer with High Human Pathogenic Potential
Animals
2023
Phylogenetic relationship and virulence composition of Escherichia coli O26:H11 cattle and human strain collections in Scotland; 2002–2020
Frontiers in Microbiology
2022
Outbreak of STEC O157:H7 linked to a milk pasteurisation failure at a dairy farm in England, 2019
Epidemiology and Infection
2022
Identification of domestic reservoirs and common exposures in an emerging lineage of Shiga toxin-producing Escherichia coli O157:H7 in England: a genomic epidemiological analysis
The Lancet Microbe
2022
Characterization of Atypical Shiga Toxin Gene Sequences and Description of Stx2j, a New Subtype
Journal of Clinical Microbiology
2021
Outbreak of Shiga toxin-producing Escherichia coli O157 linked with consumption of a fast-food product containing imported cucumbers, United Kingdom, August 2020
International Journal of Infectious Diseases
2021
Epidemiological investigations identified an outbreak of Shiga toxin-producing Escherichia coli serotype O26:H11 associated with pre-packed sandwiches
Epidemiology and Infection
2021
Epidemiology and genomic analysis of Shiga toxin-producing Escherichia coli clonal complex 165 in the UK
Journal of Medical Microbiology
2021
Inconsistent PCR detection of Shiga toxin-producing Escherichia coli: Insights from whole genome sequence analyses
PLOS ONE
2021
Phylogenetic context of Shiga toxin-producing Escherichia coli serotype O26:H11 in England
Microbial Genomics
2021
Phylogenetic structure of Shiga toxin-producing Escherichia coli O157:H7 from sub-lineage to SNPs
Microbial Genomics
2020
Shiga Toxin-Producing and Enteroaggregative Escherichia coli in Animal, Foods, and Humans: Pathogenicity Mechanisms, Detection Methods, and Epidemiology
Current Microbiology
2020
New Insight into Brucella Infection and Foodborne Diseases
2020
MLST based serotype prediction for the accurate identification of non typhoidal Salmonella serovars
Molecular Biology Reports
2020
Pathogenomes of Atypical Non-shigatoxigenic Escherichia coli NSF/SF O157:H7/NM: Comprehensive Phylogenomic Analysis Using Closed Genomes
Frontiers in Microbiology
2020
Evaluation of chromogenic selective agar (CHROMagar STEC) for the direct detection of Shiga toxin-producing Escherichia coli from faecal specimens
Journal of Medical Microbiology
2019
Eleven High-Quality Reference Genome Sequences and 360 Draft Assemblies of Shiga Toxin-Producing Escherichia coli Isolates from Human, Food, Animal, and Environmental Sources in Canada
Microbiology Resource Announcements
2019
Outbreak of Shiga toxin-producing Escherichia coli O157:H7 linked to raw drinking milk resolved by rapid application of advanced pathogen characterisation methods, England, August to October 2017
Eurosurveillance
2019
Comparison of single-nucleotide variants identified by Illumina and Oxford Nanopore technologies in the context of a potential outbreak of Shiga toxin–producing Escherichia coli
GigaScience
2019
SMRT sequencing reveals differential patterns of methylation in two O111:H- STEC isolates from a hemolytic uremic syndrome outbreak in Australia
Scientific Reports
2019
Impact of whole genome sequencing on the investigation of food-borne outbreaks of Shiga toxin-producing Escherichia coli serogroup O157:H7, England, 2013 to 2017
Eurosurveillance
2019
Phage Predation Shapes the Population Structure of Shiga-Toxigenic Escherichia coli O157:H7 in the UK: An Evolutionary Perspective
Frontiers in Genetics
2019
Contribution and Interaction of Shiga Toxin Genes to Escherichia coli O157:H7 Virulence
Toxins
2019
Emergence and divergence of major lineages of Shiga-toxin-producing Escherichia coli in Australia
Microbial Genomics
2019
Shiga toxin sub-type 2a increases the efficiency of Escherichia coli O157 transmission between animals and restricts epithelial regeneration in bovine enteroids
PLOS Pathogens
2018
An outbreak of Shiga toxin-producing Escherichia coli O157:H7 associated with contaminated salad leaves: epidemiological, genomic and food trace back investigations
Epidemiology and Infection
2018
Validation of Whole-Genome Sequencing for Identification and Characterization of Shiga Toxin-Producing Escherichia coli To Produce Standardized Data To Enable Data Sharing
Journal of Clinical Microbiology
2018
Highly Pathogenic Clone of Shiga Toxin–ProducingEscherichia coliO157:H7, England and Wales
Emerging Infectious Diseases
2017
Shiga Toxin Subtypes of Non-O157 Escherichia coli Serogroups Isolated from Cattle Feces
Frontiers in Cellular and Infection Microbiology
2017
SubtypingEscherichia coliVirulence Genes Isolated from Feces of Beef Cattle and Clinical Cases in Alberta
Foodborne Pathogens and Disease
2017
Severe Outbreak of Sorbitol‐Fermenting Escherichia coli O157 via Unpasteurized Milk and Farm Visits, Finland 2012
Zoonoses and Public Health
2016
Subtilase contributes to the cytotoxicity of a Shiga toxin-producing Escherichia coli strain encoding three different toxins
International Journal of Food Microbiology
2016
Whole Genome Sequencing for Public Health Surveillance of Shiga Toxin-Producing Escherichia coli Other than Serogroup O157
Frontiers in Microbiology
2016
Phenotypic and Genotypic Characteristics of Shiga Toxin-Producing Escherichia coli Isolated from Surface Waters and Sediments in a Canadian Urban-Agricultural Landscape
Frontiers in Cellular and Infection Microbiology
2016
Escherichia coli in the Americas
2016
Whole genome sequencing improved case ascertainment in an outbreak of Shiga toxin-producing Escherichia coli O157 associated with raw drinking milk
Epidemiology and Infection
2016
Implementation of Whole Genome Sequencing (WGS) for Identification and Characterization of Shiga Toxin-Producing Escherichia coli (STEC) in the United States
Frontiers in Microbiology
2016
Comparative Evaluation of Genomic and Laboratory Approaches for Determination of Shiga Toxin Subtypes in Escherichia coli
Journal of Food Protection
2015
Public Health Investigation of Two Outbreaks of Shiga Toxin-Producing Escherichia coli O157 Associated with Consumption of Watercress
Applied and Environmental Microbiology
2015
Utility of Whole-Genome Sequencing of Escherichia coli O157 for Outbreak Detection and Epidemiological Surveillance
Journal of Clinical Microbiology
2015
Applying phylogenomics to understand the emergence of Shiga-toxin-producing Escherichia coli O157:H7 strains causing severe human disease in the UK
Microbial Genomics
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