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2025
The Long and the Short of It: Nanopore‐Based eDNA Metabarcoding of Marine Vertebrates Works; Sensitivity and Species‐Level Assignment Depend on Amplicon Lengths
Molecular Ecology Resources
2025
Spatiotemporal eDNA Monitoring of Marine Biodiversity in a Hyperurbanised Coastal Environment
Environmental DNA
2025
Monitoring Atlantic Salmon (Salmo salar) Smolt Migration in a Large River System Using Environmental DNA
Environmental DNA
2025
Quantifying the effect of key factors on the shedding and decay rates of eDNA from the golden mussel
Journal of Environmental Management
2025
Navigating Methodological Trade‐Offs in eDNA Metabarcoding Biodiversity Monitoring: Insights From a Mediterranean Watershed
Molecular Ecology Resources
2025
Proving a negative: Estimating species ‘confidence in absence for decision‐making’ using environmental DNA monitoring
Journal of Applied Ecology
2025
Integrating eDNA and community science to monitor urban Odonata diversity
Insect Conservation and Diversity
2025
Advancing molecular macrobenthos biodiversity monitoring: a comparison between Oxford Nanopore and Illumina based metabarcoding and metagenomics
PeerJ
2025
Unraveling the connectivity in fish communities inhabiting ecologically crucial seaweed and seagrass habitats of tropical islands via eDNA
Marine Environmental Research
2025
eDNA Replicates, Polymerase and Amplicon Size Impact Inference of Richness Across Habitats
Environmental DNA
2025
Invasive Crayfish: Drivers or Passengers of Degradation in Freshwater Ecosystems?
Environmental DNA
2025
Varying Responses to Heat Stress and Salinization Between Benthic and Pelagic Riverine Microbial Communities
Environmental Microbiology
2025
Multi-species eDNA as a screening tool to facilitate early detection and eradication of aquatic invasive species in large water bodies
Scientific Reports
2025
The impact of elevated temperature and salinity on microbial communities and food selectivity in heterotrophic nanoflagellates in the Boye River
ISME Communications
2025
Technical challenges in the implementation of macroinvertebrate DNA metabarcoding in river biomonitoring: A case study from peninsular Spain—Advantages, limitations and roadmap
Ecological Solutions and Evidence
2024
The MIEM guidelines: Minimum information for reporting of environmental metabarcoding data
Metabarcoding and Metagenomics
2024
Towards a Standardized Operating Procedure for eDNA‐Based Biomonitoring in Coastal Marine Salmon Aquaculture
Environmental DNA
2024
Environmental DNA metabarcoding differentiates between micro‐habitats within the rocky intertidal
Environmental DNA
2024
Autonomous samplers and environmental DNA metabarcoding: sampling day and primer choice have greatest impact on fish detection probabilities
Metabarcoding and Metagenomics
2024
La reconnaissance des espèces basée sur l’ADN : applications, perspectives et défisen milieu continental terrestre
Naturae
2024
Is it worth the extra mile? Comparing environmental DNA and RNA metabarcoding for vertebrate and invertebrate biodiversity surveys in a lowland stream
PeerJ
2024
Optimising species detection probability and sampling effort in lake fish eDNA surveys
Metabarcoding and Metagenomics
2024
Cost-effort analysis of Baited Remote Underwater Video (BRUV) and environmental DNA (eDNA) in monitoring marine ecological communities
PeerJ
2024
Optimizing eDNA Replication for Standardized Application in Lotic Systems in Aotearoa, New Zealand
Environmental DNA
2023
Insights in Pharmaceutical Pollution: The Prospective Role of eDNA Metabarcoding
Toxics
2023
Integration of environmental DNA metabarcoding technique to reinforce fish biodiversity assessments in seagrass ecosystems: A case study of Gazi bay seagrass meadows
Environmental DNA
2023
High frequency environmental DNA metabarcoding provides rapid and effective monitoring of fish community dynamics
Environmental DNA
2023
Unveiling the hidden diversity of marine eukaryotes in the Ross Sea: A comparative analysis of seawater and sponge eDNA surveys
Environmental DNA
2023
Comparison of destructive and nondestructiveDNAextraction methods for the metabarcoding of arthropod bulk samples
Molecular Ecology Resources
2023
Comparative efficacy of eDNA and conventional methods for monitoring wetland anuran communities
Frontiers in Ecology and Evolution
2023
Spatial distribution of sedimentary DNA is taxon-specific and linked to local occurrence at intra-lake scale
Communications Earth & Environment
2023
Environmental DNA compliments traditional sampling for monitoring fish communities in a Texas estuary
North American Journal of Fisheries Management
2023
Beyond species detection—leveraging environmental DNA and environmental RNA to push beyond presence/absence applications
Environmental DNA
2023
DNA Barcoding of Trichobilharzia (Trematoda: Schistosomatidae) Species and Their Detection in eDNA Water Samples
Diversity
2023
Urban landscape-level biodiversity assessments of aquatic and terrestrial vertebrates by environmental DNA metabarcoding
Journal of Environmental Management
2023
Assessing Freshwater Microbiomes from Different Storage Sources in the Caribbean Using DNA Metabarcoding
Microorganisms
2023
BeeDNA: Microfluidic environmental DNA metabarcoding as a tool for connecting plant and pollinator communities
Environmental DNA
2022
A National Scale “BioBlitz” Using Citizen Science and eDNA Metabarcoding for Monitoring Coastal Marine Fish
Frontiers in Marine Science
2022
Development and evaluation of PCR primers for environmental DNA (eDNA) metabarcoding of Amphibia
Metabarcoding and Metagenomics
2022
Environmental DNA metabarcoding reveals comparable responses to agricultural stressors on different trophic levels of a freshwater community
Molecular Ecology
2022
Leveraging eDNA metabarcoding to characterize nearshore fish communities in Southeast Alaska: Do habitat and tide matter?
Environmental DNA
2022
Evaluating eDNA for Use within Marine Environmental Impact Assessments
Journal of Marine Science and Engineering
2022
Dataset complexity impacts both MOTU delimitation and biodiversity estimates in eukaryotic 18S rRNA metabarcoding studies
Environmental DNA
2022
Improved biodiversity detection using a large-volume environmental DNA sampler with in situ filtration and implications for marine eDNA sampling strategies
Deep Sea Research Part I: Oceanographic Research Papers
2022
Environmental DNA (eDNA) metabarcoding surveys show evidence of non-indigenous freshwater species invasion to new parts of Eastern Europe
Metabarcoding and Metagenomics
2021
Assessing the impact of the threatened crucian carp (Carassius carassius) on pond invertebrate diversity: A comparison of conventional and molecular tools
Molecular Ecology
2021
Evaluation of V2 18S rDNA barcode marker and assessment of sample collection and DNA extraction methods for metabarcoding of autotrophic euglenids
Environmental Microbiology
2021
Subsurface automated samplers for eDNA (SASe) for biological monitoring and research
HardwareX
2021
Revisiting the effect of PCR replication and sequencing depth on biodiversity metrics in environmental DNA metabarcoding
Ecology and Evolution
2021
The utility of environmental DNA from sediment and water samples for recovery of observed plant and animal species from four Mojave Desert springs
Environmental DNA
2021
Comparing environmental metabarcoding and trawling survey of demersal fish communities in the Gulf of St. Lawrence, Canada
Environmental DNA
2021
Improved freshwater macroinvertebrate detection from environmental DNA through minimized nontarget amplification
Environmental DNA
2021
Integrating eDNA metabarcoding and simultaneous underwater visual surveys to describe complex fish communities in a marine biodiversity hotspot
Molecular Ecology Resources
2021
Beyond fish eDNA metabarcoding: Field replicates disproportionately improve the detection of stream associated vertebrate species
Metabarcoding and Metagenomics
2020
A practical guide to DNA metabarcoding for entomological ecologists
Ecological Entomology
2020
Development and evaluation of fish eDNA metabarcoding assays facilitate the detection of cryptic seahorse taxa (family: Syngnathidae)
Environmental DNA
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