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2025	Transposable element expression and sub-cellular dynamics during hPSC differentiation to endoderm, mesoderm, and ectoderm lineages Nature Communications Isaac A. Babarinde, Xiuling Fu, Gang Ma, Yuhao Li, Zhangting Liang, Jianfei Xu, Zhen Xiao, Yu Qiao, Zheng Lin, Katerina Oleynikova, Mobolaji T. Akinwole, Xuemeng Zhou, Alexey Ruzov, Andrew P. Hutchins
2024	Change in the ability of bovine granulosa cells to elongate transzonal projections and their transcriptome changes during follicle development Journal of Reproduction and Development Mihoko FUSHII, Hirohisa KYOGOKU, Jibak LEE, Takashi MIYANO
2023	ER export signals mediate plasma membrane localization of transmembrane protein TMEM72 The FEBS Journal Jiangli Ding, Tomoh Matsumiya, Yasuo Miki, Ryo Hayakari, Yuko Shiba, Shogo Kawaguchi, Kazuhiko Seya, Tadaatsu Imaizumi
2023	Entropy sorting of single-cell RNA sequencing data reveals the inner cell mass in the human pre-implantation embryo Stem Cell Reports Arthur Radley, Elena Corujo-Simon, Jennifer Nichols, Austin Smith, Sara-Jane Dunn
2023	Redefining normal breast cell populations using long noncoding RNAs Nucleic Acids Research Mainá Bitar, Isela Sarahi Rivera, Isabela Almeida, Wei Shi, Kaltin Ferguson, Jonathan Beesley, Sunil R Lakhani, Stacey L Edwards, Juliet D French
2022	LRcell: detecting the source of differential expression at the sub–cell-type level from bulk RNA-seq data Briefings in Bioinformatics Wenjing Ma, Sumeet Sharma, Peng Jin, Shannon L Gourley, Zhaohui S Qin
2020	Initiation of a conserved trophectoderm program in human, cow and mouse embryos Nature Claudia Gerri, Afshan McCarthy, Gregorio Alanis-Lobato, Andrej Demtschenko, Alexandre Bruneau, Sophie Loubersac, Norah M. E. Fogarty, Daniel Hampshire, Kay Elder, Phil Snell, Leila Christie, Laurent David, Hilde Van de Velde, Ali A. Fouladi-Nashta, Kathy K. Niakan
2020	A deconvolution method and its application in analyzing the cellular fractions in acute myeloid leukemia samples BMC Genomics Huamei Li, Amit Sharma, Wenglong Ming, Xiao Sun, Hongde Liu
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