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2025	Methods in Molecular Biology Alexander E. Kister
2025	Harnessing deep learning for proteome-scale detection of amyloid signaling motifs Bioinformatics Krzysztof Pysz, Jakub Gałązka, Witold Dyrka
2022	Exploring a diverse world of effector domains and amyloid signaling motifs in fungal NLR proteins PLOS Computational Biology Jakub W. Wojciechowski, Emirhan Tekoglu, Marlena Gąsior-Głogowska, Virginie Coustou, Natalia Szulc, Monika Szefczyk, Marta Kopaczyńska, Sven J. Saupe, Witold Dyrka
2022	Studies in Big Data Marenglen Biba, Narasimha Rao Vajjhala
2021	Searching for universal model of amyloid signaling motifs using probabilistic context-free grammars BMC Bioinformatics Witold Dyrka, Marlena Gąsior-Głogowska, Monika Szefczyk, Natalia Szulc
2020	Lecture Notes in Computer Science Olgierd Unold, Mateusz Gabor, Witold Dyrka
2019	Lecture Notes in Computer Science Olgierd Unold, Mateusz Gabor
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