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2024	PsiPartition: Improved Site Partitioning for Genomic Data by Parameterized Sorting Indices and Bayesian Optimization Journal of Molecular Evolution Shijie Xu, Akira Onoda
2023	Structure-Based GC Investigation Sheds New Light on ITS2 Evolution in Corydalis Species International Journal of Molecular Sciences Qing Xian, Suyin Wang, Yanyan Liu, Shenglong Kan, Wei Zhang
2022	Comparing Partitioned Models to Mixture Models: Do Information Criteria Apply? Systematic Biology Stephen M Crotty, Barbara R Holland
2022	Phylogenetic systematics of Yphthimoides Forster, 1964 and related taxa, with notes on the biogeographical history of Yphthimoides species Molecular Phylogenetics and Evolution Eduardo P. Barbosa, Noemy Seraphim, Gorky Valencia, Ana Maria L. Azeredo-Espin, André V.L. Freitas
2022	2022 14th International Conference on Knowledge and Systems Engineering (KSE) Thu Kim Le, Le Sy Vinh
2021	Mitogenomes provide insights into the phylogeny of Mycetophilidae (Diptera: Sciaroidea) Gene Qingyun Wang, Junhao Huang, Hong Wu
2021	Node ages, relationships, and phylogenomic incongruence in an ancient gymnosperm lineage – Phylogeny of Ephedra revisited TAXON Catarina Rydin, Ruben Blokzijl, Olle Thureborn, Niklas Wikström
2021	2021 13th International Conference on Knowledge and Systems Engineering (KSE) Thu Kim Le, Vinh Sy Le
2021	Museomics: Phylogenomics of the Moth Family Epicopeiidae (Lepidoptera) Using Target Enrichment Insect Systematics and Diversity Elsa Call, Christoph Mayer, Victoria Twort, Lars Dietz, Niklas Wahlberg, Marianne Espeland
2020	2020 RIVF International Conference on Computing and Communication Technologies (RIVF) Thu Kim Le, Vinh Sy Le
2020	mPartition: A Model-Based Method for Partitioning Alignments Journal of Molecular Evolution Thu Le Kim, Vinh Le Sy
2020	2020 12th International Conference on Knowledge and Systems Engineering (KSE) Thu Kim Le, Vinh Sy Le, Dong Do Due, Thang Bui Ngoc, Thao Nguyen Thi Phuong
2020	Phylogeny of the superfamily Gelechioidea (Lepidoptera: Obtectomera), with an exploratory application on geometric morphometrics Zoologica Scripta Qing‐Yun Wang, Hou‐Hun Li
2020	A New and Rare Actinote Hübner (Lepidoptera: Nymphalidae: Heliconiinae: Acraeini) from Southeastern Brazil Neotropical Entomology A. V. L. Freitas, R. B. Francini, O. H. H. Mielke, A. H. B. Rosa, L. M. Magaldi, K. L. Silva-Brandão
2019	Dynamism in plastome structure observed across the phylogenetic tree of ferns Botanical Journal of the Linnean Society Samuli Lehtonen, Glenda G Cárdenas
2019	Why the monophyly of Nymphaeaceae currently remains indeterminate: an assessment based on gene-wise plastid phylogenomics Plant Systematics and Evolution Michael Gruenstaeudl
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