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2025	Potential Bacterial Biomarkers Associated with Penaeus stylirostris Shrimp Larvae to Infer Holobiont Health and Dysbiosis Across Larvae Stages Microorganisms Nolwenn Callac, Carolane Giraud, Valérie Perez, Dominique Ansquer, Jean-Sébastien Lam, Viviane Boulo, Dominique Pham, Nelly Wabete
2025	Divergence patterns of bacterial communities between larviculture systems of two Penaeus vannamei strains with distinct culture traits Aquaculture Heng Chen, Fengdie Zhang, Junqi Yu, Rudan Chen, Demin Zhang, Chen Chen, Kai Wang
2024	Improving the efficiency of DNA extraction from iron incrustations and oilfield-produced water Scientific Reports Md Javed Foysal, Silvia J. Salgar-Chaparro
2024	Active Microbiota of Penaeus stylirostris Larvae: Partially Shaped via Vertical and Horizontal Transmissions and Larval Ontogeny Microorganisms Nolwenn Callac, Carolane Giraud, Dominique Pham, Dominique Ansquer, Nelly Wabete, Viviane Boulo
2024	Efficiency comparison of DNA extraction kits for analysing the cockle gut bacteriome Heliyon Catarina F. Lourenço, Ana R. Almeida, Amadeu M.V.M. Soares, Catarina R. Marques
2023	Microbial biomarker detection in shrimp larvae rearing water as putative bio-surveillance proxies in shrimp aquaculture PeerJ Nolwenn Callac, Carolane Giraud, Viviane Boulo, Nelly Wabete, Dominique Pham
2023	Estimating the bias related to DNA recovery from hemp stems for retting microbial community investigation Applied Microbiology and Biotechnology Eliane Bou Orm, Stéphane Sauvagère, Janick Rocher, Jean-Charles Benezet, Sandrine Bayle, Christian Siatka, Anne Bergeret, Luc Malhautier
2023	Consistent features of the gut microbiota in response to diverse shrimp Litopenaeus vannamei diseases: A meta‐analysis Fish and Fisheries Jiangning Mao, Jiaqi Lu, Jiong Chen, Jinbo Xiong
2022	How a holobiome perspective could promote intensification, biosecurity and eco-efficiency in the shrimp aquaculture industry Frontiers in Marine Science Eric D. Gutiérrez-Pérez, Ricardo Vázquez-Juárez, Francisco J. Magallón-Barajas, Miguel Á. Martínez-Mercado, Alejandra Escobar-Zepeda, Paola Magallón-Servín
2022	Guideline for the analysis of the microbial communities of the human upper airways Journal of Oral Microbiology Leonardo Mancabelli, Tecla Ciociola, Gabriele Andrea Lugli, Chiara Tarracchini, Federico Fontanta, Alice Viappiani, Francesca Turroni, Andrea Ticinesi, Tiziana Meschi, Stefania Conti, Marco Ventura, Christian Milani
2022	Ice‐Ice disease: An environmentally and microbiologically driven syndrome in tropical seaweed aquaculture Reviews in Aquaculture Georgia M. Ward, Cicilia S. B. Kambey, Joseph P. Faisan, Pui‐Ling Tan, Caroline C. Daumich, Ivy Matoju, Grant D. Stentiford, David Bass, Phaik‐Eem Lim, Juliet Brodie, Sze‐Wan Poong
2021	Understanding the role of the shrimp gut microbiome in health and disease Journal of Invertebrate Pathology Corey C. Holt, David Bass, Grant D. Stentiford, Mark van der Giezen
2021	Larvae of Deep-Sea Invertebrates Harbor Low-Diversity Bacterial Communities The Biological Bulletin Tyler J. Carrier, Stace E. Beaulieu, Susan W. Mills, Lauren S. Mullineaux, Adam M. Reitzel
2021	Benchmarking DNA isolation kits used in analyses of the urinary microbiome Scientific Reports Lisa Karstens, Nazema Y. Siddiqui, Tamara Zaza, Alecsander Barstad, Cindy L. Amundsen, Tatyana A. Sysoeva
2021	Elucidating biofilm diversity on water lily leaves through 16S rRNA amplicon analysis: Comparison of four DNA extraction kits Applications in Plant Sciences Kathrin Janssen, Shook Ling Low, Yan Wang, Qi‐Yong Mu, Gabriele Bierbaum, Carole T. Gee
2021	Design and Evaluation of a PCR Method for Detecting White Spot Syndrome Virus in Shrimp Iranian South Medical Journal Hossein Moein, Farshid Kafilzadeh, Mohammad Reza Miri, Mohammad Khalilpazir
2020	Fine-scale succession patterns and assembly mechanisms of bacterial community of Litopenaeus vannamei larvae across the developmental cycle Microbiome Yanting Wang, Kai Wang, Lei Huang, Pengsheng Dong, Sipeng Wang, Heping Chen, Zheng Lu, Dandi Hou, Demin Zhang
2020	Temporal dynamics of aquatic microbiota and their correlation with environmental factors during larviculture of the shrimp Litopenaeus vannamei Aquaculture Ming Xue, Yaoyao He, Dixing Chen, Liqun Wang, Huafang Liang, Jianyong Liu, Chong-Qing Wen
2020	Insights into the microbiota of larval and postlarval Pacific white shrimp (Penaeus vannamei) along early developmental stages: a case in pond level Molecular Genetics and Genomics Hailiang Wang, Jie Huang, Ping Wang, Ting Li
2020	Lactic Acid Bacteria in Shellfish: Possibilities and Challenges Reviews in Fisheries Science & Aquaculture Einar Ringø, Hien Van Doan, Soonho Lee, Seong Kyu Song
2019	Comparative analysis of eight DNA extraction methods for molecular research in mealybugs PLOS ONE Yu-Sheng Wang, Tian-Mei Dai, Hu Tian, Fang-Hao Wan, Gui-Fen Zhang
2019	Using Mothur to Determine Bacterial Community Composition and Structure in 16S Ribosomal RNA Datasets Current Protocols in Bioinformatics Sruthi Chappidi, Erika C. Villa, Brandi L. Cantarel
2019	A metagenomics investigation of carbohydrate-active enzymes along the goat and camel intestinal tract International Microbiology Saad Al-Masaudi, Abdessamad El Kaoutari, Elodie Drula, Elrashdy M. Redwan, Vincent Lombard, Bernard Henrissat
2019	Molecular techniques and their limitations shape our view of the holobiont Zoology Ira Cooke, Oliver Mead, Casey Whalen, Chloë Boote, Aurelie Moya, Hua Ying, Steven Robbins, Jan M. Strugnell, Aaron Darling, David Miller, Christian R. Voolstra, Maja Adamska
2019	Multiplex PCR using YeaD and 16S rRNA gene to identify major pathogens in vibriosis of Litopenaeus vannamei Genes & Genomics Yeong-Jong Han, Ara Jo, So-Won Kim, Hee-Eun Lee, Young Chul Kim, Hyun Do Jeong, Yung Hyun Choi, Suhkmann Kim, Hee-Jae Cha, Heui-Soo Kim
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