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2025
Microbiome mismatches from microbiota transplants lead to persistent off-target metabolic and immunomodulatory effects
Cell
2025
Correlation between the structures of natural polysaccharides and their properties in regulating gut microbiota: Current understanding and beyond
Carbohydrate Polymers
2025
Diet outperforms microbial transplant to drive microbiome recovery in mice
Nature
2024
Akkermansia muciniphila in the small intestine improves liver fibrosis in a murine liver cirrhosis model
npj Biofilms and Microbiomes
2024
Acute gastrointestinal permeability after traumatic brain injury in mice precedes a bloom in Akkermansia muciniphila supported by intestinal hypoxia
Scientific Reports
2024
Kinetics of imidazole propionate from orally delivered histidine in mice and humans
npj Biofilms and Microbiomes
2024
The NLRP3 Inflammasome Is Dispensable in Methicillin-Resistant Staphylococcus aureus Urinary Tract Infection
Pathogens
2024
Investigating the influence of perinatal fluoxetine exposure on murine gut microbial communities during pregnancy and lactation
Scientific Reports
2024
Intestinal stem cells: guardians of homeostasis in health and aging amid environmental challenges
Experimental & Molecular Medicine
2024
Differential effects of four laboratory animal control diets on gut microbiota in mice
Journal of the Science of Food and Agriculture
2024
Enteric tuft cells coordinate timely expulsion of the tapeworm Hymenolepis diminuta from the murine host by coordinating local but not systemic immunity
PLOS Pathogens
2024
Subchronic inhalation exposure to ultrafine particulate matter alters the intestinal microbiome in various mouse models
Environmental Research
2023
Periodontitis‐induced oral microbiome alterations provide clues on how periodontitis exacerbates colitis
Journal of Clinical Periodontology
2023
Emodin modulates gut microbial community and triggers intestinal immunity
Journal of the Science of Food and Agriculture
2023
Methods in Molecular Biology
2023
Risk of bias assessment tool for systematic review and meta-analysis of the gut microbiome
Gut Microbiome
2023
5-Aminosalicylic acid alters the gut microbiota and altered microbiota transmitted vertically to offspring have protective effects against colitis
Scientific Reports
2023
Improving intestinal inflammaging to delay aging? A new perspective
Mechanisms of Ageing and Development
2023
Guidelines for microbiome studies in renal physiology
American Journal of Physiology-Renal Physiology
2023
Effect of a Fructose-Rich Diet on Gut Microbiota and Immunomodulation: Potential Factors for Multiple Sclerosis
ImmunoHorizons
2023
Gut Dysbiosis in Experimental Kidney Disease: A Meta-Analysis of Rodent Repository Data
Journal of the American Society of Nephrology
2023
Protocol for acquiring samples to assess the impact of microplastics on immune microenvironments in the mouse intestine
STAR Protocols
2022
Limnospira indica PCC 8005 or Lacticaseibacillus rhamnosus GG Dietary Supplementation Modulate the Gut Microbiome in Mice
Applied Microbiology
2021
Early-Life Microbial Restitution Reduces Colitis Risk Promoted by Antibiotic-Induced Gut Dysbiosis in Interleukin 10–/– Mice
Gastroenterology
2021
Metagenomic Alterations in Gut Microbiota Precede and Predict Onset of Colitis in the IL10 Gene-Deficient Murine Model
Cellular and Molecular Gastroenterology and Hepatology
2021
Colonic Epithelial-Derived Selenoprotein P Is the Source for Antioxidant-Mediated Protection in Colitis-Associated Cancer
Gastroenterology
2021
The Atg16l1 gene: characterization of wild type, knock-in, and knock-out phenotypes in rats
Physiological Genomics
2021
The Butyrate-Producing Bacterium Clostridium butyricum Suppresses Clostridioides difficile Infection via Neutrophil- and Antimicrobial Cytokine–Dependent but GPR43/109a-Independent Mechanisms
The Journal of Immunology
2021
Cage Environment Regulates Gut Microbiota Independent of Toll-Like Receptors
Infection and Immunity
2021
Intestinal mucositis precedes dysbiosis in a mouse model for pelvic irradiation
ISME Communications
2020
Microbiomes in the insectivorous bat species Mops condylurus rapidly converge in captivity
PLOS ONE
2020
Epithelial Toll-like receptors and their role in gut homeostasis and disease
Nature Reviews Gastroenterology & Hepatology
2020
Mucosal-associated invariant T (MAIT) cells mediate protective host responses in sepsis
eLife
2020
Artificial microbiome heterogeneity spurs six practical action themes and examples to increase study power-driven reproducibility
Scientific Reports
2020
Present Knowledge in Nutrition
2020
Safety Assessment of Bacteroides Uniformis CECT 7771, a Symbiont of the Gut Microbiota in Infants
Nutrients
2020
Depletion of Foxp3+ regulatory T cells is accompanied by an increase in the relative abundance of Firmicutes in the murine gut microbiome
Immunology
2020
Examination of the fecal microbiota in dairy cows infected with bovine leukemia virus
Veterinary Microbiology
2020
Faecal virome transplantation decreases symptoms of type 2 diabetes and obesity in a murine model
Gut
2020
Managing batch effects in microbiome data
Briefings in Bioinformatics
2019
Faecal microbiota and functional capacity associated with weaning weight in meat rabbits
Microbial Biotechnology
2019
Role of the Microbiota in the Modulation of Vaccine Immune Responses
Frontiers in Microbiology
2019
Intestinal epithelial barrier functions in ageing
Ageing Research Reviews
2019
The microgenderome revealed: sex differences in bidirectional interactions between the microbiota, hormones, immunity and disease susceptibility
Seminars in Immunopathology
2019
Success in Academic Surgery
2019
Batch effect exerts a bigger influence on the rat urinary metabolome and gut microbiota than uraemia: a cautionary tale
Microbiome
2018
The evidence for fungus in Crohn’s disease pathogenesis
Clinical Journal of Gastroenterology
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