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2025
Encyclopedia of Bioinformatics and Computational Biology
2024
Modeling Substitution Rate Evolution across Lineages and Relaxing the Molecular Clock
Genome Biology and Evolution
2024
Expectation-Maximization enables Phylogenetic Dating under a Categorical Rate Model
Systematic Biology
2024
Dating in the Dark: Elevated Substitution Rates in Cave Cockroaches (Blattodea: Nocticolidae) Have Negative Impacts on Molecular Date Estimates
Systematic Biology
2023
Classic QnAs with Rasmus Grønfeldt Winther and Eske Willerslev
Proceedings of the National Academy of Sciences
2023
EvoPhylo: An r package for pre‐ and postprocessing of morphological data from relaxed clock Bayesian phylogenetics
Methods in Ecology and Evolution
2023
Molecular and morphological evidence reveals the presence of the tadpole shrimp Lepidurus cf. couesii (crustacea: Branchiopoda) in Iran
Zoologischer Anzeiger
2023
Reappraisal of the systematics of two sympatric coral snakes (Reptilia: Elapidae) from Northeast India
Systematics and Biodiversity
2023
Detecting Episodic Evolution through Bayesian Inference of Molecular Clock Models
Molecular Biology and Evolution
2022
The Emergence of SARS-CoV-2 Variants of Concern Is Driven by Acceleration of the Substitution Rate
Molecular Biology and Evolution
2022
Preserving local biodiversity through crop diversification
American Journal of Agricultural Economics
2022
The phylodynamics of emerging porcine deltacoronavirus in Southeast Asia
Transboundary and Emerging Diseases
2021
Evolutionary History and Taxonomic Reappraisal of Coral Reef Rabbitfishes (Siganidae): Patterns of Lineage Diversification and Speciation
Biology
2021
Bayesian phylogenetic analysis of linguistic data using BEAST
Journal of Language Evolution
2020
Model-Based Inference of Punctuated Molecular Evolution
Molecular Biology and Evolution
2019
Divergence before and after the isolation of islands: Phylogeography of the Bradybaena land snails on the Ryukyu Islands of Japan
Journal of Biogeography
2019
BEAST 2.5: An advanced software platform for Bayesian evolutionary analysis
PLOS Computational Biology
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