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2023	Purine metabolism regulates Vibrio splendidus persistence associated with protein aggresome formation and intracellular tetracycline efflux Frontiers in Microbiology Yanan Li, Thomas K. Wood, Weiwei Zhang, Chenghua Li
2023	Expression profiles of genes involved in sugar metabolism during fruit development and ripening of paprika (Capsicum annuum L.) Horticulture, Environment, and Biotechnology Hualin Nie, Sanghee Lee, Sohee Lim, Jong-Suk Park, Ju Kim, Se Hong Bae, Yi Lee, Ah-Young Shin, Suk-Yoon Kwon
2023	Transcriptome Profiles Reveal the Promoting Effects of Exogenous Melatonin on Fruit Softening of Chinese Plum International Journal of Molecular Sciences Zhiyu Li, Lu Zhang, Yaxin Xu, Xuemei Zhang, Yanzhou Zhu, Jin Wang, Hui Xia, Dong Liang, Xiulan Lv, Lijin Lin
2023	Comparative transcriptome profiling of fruit tissue provides novel insights into piperine biosynthesis in black pepper (Piper nigrum L.) Scientia Horticulturae Sheel Yadav, Anshika Tyagi, Ratna Kumari, Harsha Srivastava, Parimalan Rangan, Dhammaprakash Wankhede, Ambika B Gaikwad
2022	Transcriptomic and Metabolomic Analyses Provide Insights into the Formation of the Peach-like Aroma of Fragaria nilgerrensis Schlecht. Fruits Genes Ai-Hua Wang, Hong-Ye Ma, Bao-Hui Zhang, Chuan-Yuan Mo, En-Hong Li, Fei Li
2022	The Roles of Floral Organ Genes in Regulating Rosaceae Fruit Development Frontiers in Plant Science Jia-Long Yao, Chunying Kang, Chao Gu, Andrew Peter Gleave
2022	Transcriptomic Complexity in Strawberry Fruit Development and Maturation Revealed by Nanopore Sequencing Frontiers in Plant Science Qing Chen, Ximeng Lin, Wenlu Tang, Qian Deng, Yan Wang, Yuanxiu Lin, Wen He, Yunting Zhang, Mengyao Li, Ya Luo, Yong Zhang, Xiaorong Wang, Haoru Tang
2022	Quantitative Ubiquitylomic Analysis of the Dynamic Changes and Extensive Modulation of Ubiquitylation in Papaya During the Fruit Ripening Process Frontiers in Plant Science Yuxing Mo, Bian Jiang, Jingxin Huo, Jiayi Lu, Xiaoyue Zeng, Yan Zhou, Tao Zhang, Min Yang, Yuerong Wei, Kaidong Liu
2021	Reannotation of the cultivated strawberry genome and establishment of a strawberry genome database Horticulture Research Tianjia Liu, Muzi Li, Zhongchi Liu, Xiaoyan Ai, Yongping Li
2021	Integrated analysis of lncRNA and mRNA transcriptomes reveals the potential regulatory role of lncRNA in kiwifruit ripening and softening Scientific Reports Yiting Chen, Chunzhen Cheng, Xin Feng, Ruilian Lai, Minxia Gao, Wenguang Chen, Rujian Wu
2021	Genome-wide identification of ubiquitin proteasome subunits as superior reference genes for transcript normalization during receptacle development in strawberry cultivars BMC Genomics Jianqing Chen, Jinyu Zhou, Yanhong Hong, Zekun Li, Xiangyu Cheng, Aiying Zheng, Yilin Zhang, Juanjuan Song, Guifeng Xie, Changmei Chen, Meng Yuan, Tengyun Wang, Qingxi Chen
2021	Integrative analyses of metabolome and transcriptome reveals metabolomic variations and candidate genes involved in sweet cherry (Prunus avium L.) fruit quality during development and ripening PLOS ONE Haiying Yang, Changping Tian, Shujun Ji, Fengzhu Ni, Xinguang Fan, Yanqing Yang, Chanchan Sun, Hansheng Gong, Aidi Zhang
2021	Identification of candidate genes influencing anthocyanin biosynthesis during the development and ripening of red and white strawberry fruits via comparative transcriptome analysis PeerJ Fengli Zhao, Pan Song, Xiangfen Zhang, Gang Li, Panpan Hu, Ali Aslam, Xia Zhao, Houcheng Zhou
2021	Expanded transcriptomic view of strawberry fruit ripening through meta-analysis PLOS ONE Gibum Yi, Hosub Shin, Kyeonglim Min, Eun Jin Lee
2020	Transcriptomic and metabolomic analyses of Lycium ruthenicum and Lycium barbarum fruits during ripening Scientific Reports Jianhua Zhao, Haoxia Li, Yue Yin, Wei An, Xiaoya Qin, Yajun Wang, Yanlong Li, Yunfang Fan, Youlong Cao
2020	Comparative Transcriptome Profiling Reveals Compatible and Incompatible Patterns of Potato Toward Phytophthora infestans G3 Genes\|Genomes\|Genetics Yanfeng Duan, Shaoguang Duan, Miles R Armstrong, Jianfei Xu, Jiayi Zheng, Jun Hu, Xinwei Chen, Ingo Hein, Guangcun Li, Liping Jin
2020	Comparative transcriptome analysis reveals the response mechanism of Cf-16-mediated resistance to Cladosporium fulvum infection in tomato BMC Plant Biology Dongye Zhang, Yufang Bao, Yaoguang Sun, Huanhuan Yang, Tingting Zhao, Huijia Li, Chong Du, Jingbin Jiang, Jingfu Li, Libo Xie, Xiangyang Xu
2020	Fruit ripening in Lycium barbarum and Lycium ruthenicum is associated with distinct gene expression patterns FEBS Open Bio Jianhua Zhao, Haoxia Li, Yue Yin, Wei An, Xiaoya Qin, Yajun Wang, Yunfang Fan, Yanlong Li, Youlong Cao
2020	Double lysis: an integrative time-saving method yielding high-quality RNA from strawberry Journal of Genetic Engineering and Biotechnology Mohamed Hazman, Farida Kabil, Shrouk Abd Elhamid, Peter Nick
2020	Comparative transcriptome and metabolome analyses of two strawberry cultivars with different storability PLOS ONE Kyeonglim Min, Gibum Yi, Jeong Gu Lee, Hyun Sook Kim, Yoonpyo Hong, Jeong Hee Choi, Sooyeon Lim, Eun Jin Lee
2020	Genome-wide identification and analysis of long noncoding RNAs (lncRNAs) during seed development in peanut (Arachis hypogaea L.) BMC Plant Biology Xingli Ma, Xingguo Zhang, Sy Mamadou Traore, Zeyu Xin, Longlong Ning, Ke Li, Kunkun Zhao, Zhongfeng Li, Guohao He, Dongmei Yin
2019	Epirubicin-loaded marine carrageenan oligosaccharide capped gold nanoparticle system for pH-triggered anticancer drug release Scientific Reports Xiangyan Chen, Wenwei Han, Xia Zhao, Wei Tang, Fahe Wang
2019	The complexity of the Fragaria x ananassa (octoploid) transcriptome by single-molecule long-read sequencing Horticulture Research Huazhao Yuan, Hongmei Yu, Tao Huang, Xinjie Shen, Jin Xia, Fuhua Pang, Jing Wang, Mizhen Zhao
2019	Identification of genes preferentially expressed in wild strawberry receptacle fruit and demonstration of their promoter activities Horticulture Research Rachel Shahan, Dongdong Li, Zhongchi Liu
2019	Transcriptome sequencing and comparative analysis of adult ovary and testis identify potential gonadal maintenance-related genes inMauremys reevesiiwith temperature-dependent sex determination PeerJ Lei Xiong, Jinxiu Dong, Hui Jiang, Jiawei Zan, Jiucui Tong, Jianjun Liu, Meng Wang, Liuwang Nie
2018	Downregulation of RdDM during strawberry fruit ripening Genome Biology Jingfei Cheng, Qingfeng Niu, Bo Zhang, Kunsong Chen, Ruihua Yang, Jian-Kang Zhu, Yijing Zhang, Zhaobo Lang
2018	Developmental Variation in Fruit Polyphenol Content and Related Gene Expression of a Red-Fruited versus a White-Fruited Fragaria vesca Genotype Horticulturae Sutapa Roy, Sanjay Singh, Douglas D. Archbold
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