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2026
Environmental DNA as a complementary tool for monitoring fish assemblages in coastal lagoons: Insights for conservation
Marine Pollution Bulletin
2026
Metabarcoding and targeted barcoding can enhance Norwegian Continental Shelf macrofauna species inventories
PeerJ
2026
Invertebrate community composition is similar to non-invaded sites after Phragmites australis treatment in a Great Lakes coastal wetland
FACETS
2026
Comparison of environmental DNA metabarcoding and morphological classification for assessing benthic diversity in the salt marsh of Dingzi Bay, China
Regional Studies in Marine Science
2026
Environmental DNA Metabarcoding of a Seagrass Meadow in Vostok Bay (Peter the Great Bay, Sea of Japan): A COI Snapshot of Coastal Biodiversity and Its Limitations
Diversity
2026
eDNA as a cornerstone for holistic long-term observations of Arctic marine biodiversity across trophic levels, habitats, and spatio-temporal scales
Deep Sea Research Part II: Topical Studies in Oceanography
2026
A Comparative Analysis of DNA Metabarcoding and Morphological Identification in Diatoms Reveals Similar Patterns of Environmental Response
Ecology and Evolution
2026
MetaZooGene Intercalibration Experiment (MZG‐ICE): Metabarcoding Marine Zooplankton Diversity of the Global Ocean
Molecular Ecology Resources
2025
Marine Crabs from African Waters Housed in the Museo Nacional de Ciencias Naturales (MNCN-CSIC)—An Opportunity for Biogeographic and Systematic Studies—Part II: Thoracotremata
Diversity
2025
Interdisciplinary approaches at early invasion stages maximise the evidence on human-induced and climate-driven fish dispersal
Hydrobiologia
2025
Advancing Marine Conservation: Metabarcoding and Metaphylogeography for a Multi‐Year Biomonitoring of Benthic Communities of National Parks Across Two Seas
Diversity and Distributions
2025
Assessing the efficiency of COI primers in eDNA metabarcoding for marine metazoan biodiversity
Marine Environmental Research
2025
Integrating molecular methods and biophysical modeling to assess functional connectivity between marine protected areas
Ecological Applications
2025
Benthic Feeding and Diet Partitioning in Red Sea Mesopelagic Fish Resolved Through DNA Metabarcoding and ROV Footage
Ecology and Evolution
2025
Surveying marine biodiversity using eDNA metabarcoding of seawater and sediment in a high Arctic fjord during the polar night (Kongsfjorden, Svalbard)
Marine Environmental Research
2025
DNA Metabarcoding of Macroinvertebrates in the Biomonitoring System of Lake Baikal
Biology Bulletin
2025
A New Varunid Subfamily (Decapoda, Brachyura, Grapsoidea, Varunidae) for Crabs From European and West African Waters, With the Description of Two New Genera and Two New Species
Ecology and Evolution
2025
Multi‐Tool Marine Metabarcoding Bioassessment for Baselining and Monitoring Species and Communities in Kelp Habitats
Molecular Ecology Resources
2025
Metazoan Diversity and Its Drivers: An eDNA Survey in the Pacific Gateway of a Changing Arctic Ocean
Environmental DNA
2025
eDNA metabarcoding shows highly diverse but distinct shallow, mid-water, and deep-water eukaryotic communities within a marine biodiversity hotspot
PeerJ
2025
Characterizing Rocky Intertidal Biodiversity Using Environmental DNA Metabarcoding From Local to National Scales
Environmental DNA
2025
Forensic scatology: insights into the secretive Mediterranean monk seal via a comprehensive molecular analysis of aged and recent fecal samples
Global Ecology and Conservation
2025
Integrative molecular and taxonomic techniques reveal larval fish biodiversity patterns in the Azores UNESCO biosphere reserves
Estuarine, Coastal and Shelf Science
2025
Advancing aquatic biodiversity assessments of invertebrates using eDNA metabarcoding: A systematic evaluation of primers for marine and freshwater communities
Methods in Ecology and Evolution
2025
Evaluation of DNA barcoding reference databases for marine species in the western and central Pacific Ocean
PeerJ
2025
DNA metabarcoding analysis of stomach flushing contents reveals the exceptionally diverse diet of the golden alpine salamander
Scientific Reports
2025
Investigating the Diversity of Sea Urchins (Echinoidea) in Yogyakarta, Indonesia using Molecular Approaches, Abundance, and Ecological Index
Croatian Journal of Fisheries
2025
Expanding Monitoring Capacity for Potential Invasive Species in Arctic Canada With Environmental DNA Metabarcoding
Global Change Biology
2025
Integration of “Omics”-Based Approaches in Environmental Risk Assessment to Establish Cause and Effect Relationships: A Review
Toxics
2025
Spatial and Seasonal Biodiversity Variation in a Large Mediterranean Lagoon Using Environmental DNA Metabarcoding Through Sponge Tissue Collection
Environmental DNA
2025
Molecular tools for environmental monitoring: A review of metabarcoding studies applied to a strategic Italian Peninsula, the Apulian region
Journal of Ecology and The Natural Environment
2025
Deterministic and stochastic processes drive sessile cryptobenthic community composition on coral reefs at different spatial scales
Marine Ecology Progress Series
2025
Eukaryotic biodiversity of sub-ice water in the marginal ice zone of the European Arctic: A multi-marker eDNA metabarcoding survey
Science of The Total Environment
2025
A novel taxonomic database for eukaryotic mitochondrial cytochrome oxidase subunit I gene (eKOI), with a focus on protists diversity
Database
2025
Metabarcoding Reveals the Dietary Patterns of Bats Within a Unique European Habitat, the Pasture‐Dominated Landscapes of Ireland
Ecology and Evolution
2025
Metacommunity Theory and Metabarcoding Reveal the Environmental, Spatial and Biotic Drivers of Meiofaunal Communities in Sandy Beaches
Molecular Ecology
2025
Using the long-term genetic monitoring network ARMS-MBON to detect marine non-indigenous species along the European coasts
Biological Invasions
2025
Adaptive Sampling and Identification of Calanoid Copepods Using Acoustic Sensor Data and eDNA Metabarcoding: A Data-Driven Approach
Journal of Marine Science and Engineering
2025
An All‐in‐One Metabarcoding Approach to Mosquito and Arbovirus Xenosurveillance
Molecular Ecology Resources
2025
Geographic variation in diet, prey resources and exposure to parasites and saxitoxin in Steller sea lions in the Gulf of Alaska
Frontiers in Marine Science
2025
Unveiling diversity in inhabited and uninhabited reefs of the Lakshadweep archipelago, India using eDNA
Frontiers in Marine Science
2025
Metabarcoding identifies macroalgal composition as a driver of benthic invertebrate assemblages in restored habitats
Scientific Reports
2025
eDNA Metabarcoding Applications Across Italian Marine Coastal Ecosystems: An Overview
Environmental DNA
2025
Gaps and Data Ambiguities in DNA Reference Libraries: A Limiting Factor for Molecular‐Based Biodiversity Assessments Using Annelids as a Case Study
Ecology and Evolution
2025
Performance of DNA Metabarcoding vs. Morphological Methods for Assessing Intertidal Turf and Foliose Algae Diversity
Molecular Ecology Resources
2025
Looking to the past to inform the future: What eDNA from herbarium specimens can tell us about plant–animal interactions
Applications in Plant Sciences
2025
Environmental DNA/RNA metabarcoding for noninvasive and comprehensive monitoring and assessment of marine fishes
Marine Pollution Bulletin
2024
Detecting the invisible through DNA metabarcoding: The role of gelatinous taxa in the diet of two demersal Antarctic key stone fish species (Notothenioidei)
Environmental DNA
2024
Spatial analysis of demersal food webs through integration of eDNA metabarcoding with fishing activities
Frontiers in Marine Science
2024
Effects of livestock on arthropod biodiversity in Iberian holm oak savannas revealed by metabarcoding
Journal of Environmental Management
2024
Diet of the critically endangered blackchin guitarfish Glaucostegus cemiculus revealed using DNA metabarcoding
Journal of Fish Biology
2024
Brute force prey metabarcoding to explore the diets of small invertebrates
Ecology and Evolution
2024
North Atlantic deep-sea benthic biodiversity unveiled through sponge natural sampler DNA
Communications Biology
2024
Revisiting molecular techniques for the authentication of mackerels in commercial products: Approaches to prevent seafood fraud
Trends in Food Science & Technology
2024
Citizen science approach for genetic species identification in a local French seafood speciality
International Journal of Gastronomy and Food Science
2024
The Advantages of Combining Morphological and Molecular Methods to Characterise Zooplankton Communities: A Case Study of the UNESCO Biosphere Reserve of the Berlengas Archipelago, Portugal
Oceans
2024
Sediment DNA metabarcoding and morphology provide complementary insight into macrofauna and meiobenthos response to environmental gradients in an Arctic glacial fjord
Marine Environmental Research
2024
eDNA metabarcoding: a non-invasive method to track temporal community dynamics in temporary rivers
Limnetica
2024
Invasive European green crab (Carcinus maenas) predation in a Washington State estuary revealed with DNA metabarcoding
PLOS ONE
2024
The secret meal of Antarctic mesopelagic fish (Myctophidae: Electrona) revealed by multi-marker metabarcoding
Frontiers in Marine Science
2024
The Core of the Matter—Importance of Identification Method and Biological Replication for Benthic Marine Monitoring
Ecology and Evolution
2024
Investigating pelagic biodiversity and gelatinous zooplankton communities in the rapidly changing European Arctic: An eDNA metabarcoding survey
Environmental DNA
2024
A belly full of jelly? DNA metabarcoding shows evidence for gelatinous zooplankton predation by several fish species in Greenland waters
Royal Society Open Science
2024
Enhancing metabarcoding efficiency and ecological insights through integrated taxonomy and DNA reference barcoding: A case study on beach meiofauna
Molecular Ecology Resources
2024
Molecular barcoding reveals patterns of egg predation in small pelagic fish
Marine Ecology Progress Series
2024
Net gain: Low‐cost, trawl‐associated eDNA samplers upscale ecological assessment of marine demersal communities
Environmental DNA
2024
From where I belong: using mitochondrial DNA analysis to investigate the origin of a white shark (Carcharodon carcharias) captured in Indonesian waters
Journal of the Marine Biological Association of the United Kingdom
2024
Fish Gut Metabarcoding Detects Diets and Parasites Simultaneously
Environmental DNA
2024
In-Situ Investigation of Copepod Predators of Ichthyophthirius multifiliis Theronts from Fish-Farming Pond
Microorganisms
2024
Advancing ecological assessment of the Arabian Gulf through eDNA metabarcoding: opportunities, prospects, and challenges
Frontiers in Marine Science
2024
Experimental evaluation of genetic variability based on DNA metabarcoding from the aquatic environment: Insights from the Leray COI fragment
Ecology and Evolution
2024
NAMERS: a purpose-built reference DNA sequence database to support applied eDNA metabarcoding
Metabarcoding and Metagenomics
2024
Dietary partitioning among three cryptobenthic reef fish mesopredators revealed by visual analysis, metabarcoding of gut content, and stable isotope analysis
Environmental DNA
2024
Roaming the Seas—Assessing Marine Invertebrate Biodiversity Along Salinity Gradients With Zooplankton and eDNA Metabarcoding
Environmental DNA
2024
Taxonomic accuracy and complementarity between bulk and eDNA metabarcoding provides an alternative to morphology for biological assessment of freshwater macroinvertebrates
Science of The Total Environment
2024
eDNA metabarcoding warms up a hotspot of marine biodiversity: revealing underrepresented taxa in visual surveys and historical records from the Gulf of California
Marine Biodiversity
2024
Authentication of seafood species on the ASFIS list (FAO) by in-silico evaluation of primers for metabarcoding
Food Control
2024
High‐Resolution Longitudinal eDNA Metabarcoding and Morphological Tracking of Planktonic Threats to Salmon Aquaculture
Environmental DNA
2024
Dietary analysis using prey-DNA metabarcoding from fecal samples of the generalist arthropod predator, Eremias argus
Food Webs
2024
Environmental DNA metabarcoding differentiates between micro‐habitats within the rocky intertidal
Environmental DNA
2024
A circumpolar study of surface zooplankton biodiversity of the Southern Ocean based on eDNA metabarcoding
Environmental Research
2024
A new sampling device for metabarcoding surveillance of port communities and detection of non-indigenous species
iScience
2024
From biomarkers to community composition: Negative effects of UV/chlorine-treated reclaimed urban wastewater on freshwater biota
Science of The Total Environment
2024
Biogeographic patterns of meio- and micro-eukaryotic communities in dam-induced river-reservoir systems
Applied Microbiology and Biotechnology
2024
Nanopore environmental DNA sequencing of catch water for estimating species composition in demersal bottom trawl fisheries
Environmental DNA
2024
Know your limits; miniCOI metabarcoding fails with key marine zooplankton taxa
Journal of Plankton Research
2024
eDNA metabarcoding captures a decline of coral diversity at Taiping Island after an outbreak of Crown-of-Thorns starfish
Coral Reefs
2024
DNA metabarcoding reveals a diverse, omnivorous diet of Arctic amphipods during the polar night, with jellyfish and fish as major prey
Frontiers in Marine Science
2023
Supervised machine learning improves general applicability of eDNA metabarcoding for reservoir health monitoring
Water Research
2023
Assessing the Seasonal and Spatial Dynamics of Zooplankton through DNA Metabarcoding in a Temperate Estuary
Animals
2023
Metabarcoding: una herramienta prometedora para el estudio de la ecología trófica de peces mexicanos
Revista Mexicana de Biodiversidad
2023
Be positive: customized reference databases and new, local barcodes balance false taxonomic assignments in metabarcoding studies
PeerJ
2023
DNA metabarcoding the diet of Podarcis lizards endemic to the Balearic Islands
Current Zoology
2023
DNA metabarcoding to assess prey overlap between tuna and seabirds in the Eastern tropical Atlantic: Implications for an ecosystem-based management
Marine Environmental Research
2023
Sediment and bottom water eDNA metabarcoding to support coastal management
Ocean & Coastal Management
2023
Capturing drifting species and molecules—Lessons learned from integrated approaches to assess marine metazoan diversity in highly dynamic waters
Environmental DNA
2023
A 3‐year plankton DNA metabarcoding survey reveals marine biodiversity patterns in Australian coastal waters
Diversity and Distributions
2023
Opportunities and inherent limits of using environmental DNA for population genetics
Environmental DNA
2023
To share or not to share: DNA metabarcoding reveals trophic niche overlap between sympatric trawling bats
European Journal of Wildlife Research
2023
Metabarcoding reveals high‐resolution biogeographical and metaphylogeographical patterns through marine barriers
Journal of Biogeography
2023
Shark‐dust: Application of high‐throughput DNA sequencing of processing residues for trade monitoring of threatened sharks and rays
Conservation Letters
2023
Spatio‐temporal patterns of eukaryotic biodiversity in shallow hard‐bottom communities from the West Antarctic Peninsula revealed by DNA metabarcoding
Diversity and Distributions
2023
Molecular tools prove little auks from Svalbard are extremely selective for Calanus glacialis even when exposed to Atlantification
Scientific Reports
2023
Contaminants reach everywhere: Fish dietary samples should be surface decontaminated prior to molecular diet analysis
Ecology and Evolution
2023
Spineless and overlooked: DNA metabarcoding of autonomous reef monitoring structures reveals intra‐ and interspecific genetic diversity in Mediterranean invertebrates
Molecular Ecology Resources
2023
Mock samples resolve biases in diversity estimates and quantitative interpretation of zooplankton metabarcoding data
Marine Biodiversity
2023
Macrozoobenthos monitoring in Portuguese transitional waters in the scope of the water framework directive using morphology and DNA metabarcoding
Estuarine, Coastal and Shelf Science
2023
Fish eDNA detections in ports mirror fishing fleet activities and highlight the spread of non-indigenous species in the Mediterranean Sea
Marine Pollution Bulletin
2023
Metabarcoding the eukaryotic community of a threatened, iconic Mediterranean habitat: Posidonia oceanica seagrass meadows
Frontiers in Marine Science
2023
MultiBarcodeTools: Easy selection of optimal primers for eDNA multi‐metabarcoding
Environmental DNA
2023
Universal closed-tube barcoding for monitoring the shark and ray trade in megadiverse conservation hotspots
iScience
2023
Evaluating five primer pairs for environmental DNA metabarcoding of Central European fish species based on mock communities
Metabarcoding and Metagenomics
2023
Trophic ecology of a migratory shorebird community at a globally important non-breeding site: combining DNA metabarcoding and conventional techniques
Marine Ecology Progress Series
2022
New Paradigms in Environmental Biomonitoring Using Plants
2022
Environmental DNA sampling detects between-habitat variation in soil arthropod communities, but is a poor indicator of fine-scale spatial and seasonal variation
Ecological Indicators
2022
DnoisE: distance denoising by entropy. An open-source parallelizable alternative for denoising sequence datasets
PeerJ
2022
Monitoring of benthic eukaryotic communities in two tropical coastal lagoons through eDNA metabarcoding: a spatial and temporal approximation
Scientific Reports
2022
Fine-scale differences in eukaryotic communities inside and outside salmon aquaculture cages revealed by eDNA metabarcoding
Frontiers in Genetics
2022
Short‐term temporal variation of coastal marine eDNA
Environmental DNA
2022
Mitochondrial cytochrome c oxidase subunit I (COI) metabarcoding of Foraminifera communities using taxon-specific primers
PeerJ
2022
Using DNA Metabarcoding to Characterize the Prey Spectrum of Two Co-Occurring Themisto Amphipods in the Rapidly Changing Atlantic-Arctic Gateway Fram Strait
Genes
2022
Origin of marine invertebrate larvae on an Arctic inflow shelf
Marine Ecology Progress Series
2022
Heterogeneity across Neotropical aquatic environments affects prokaryotic and eukaryotic biodiversity based on environmental DNA
Environmental DNA
2022
Methodology for fish biodiversity monitoring with environmental DNA metabarcoding: The primers, databases and bioinformatic pipelines
Water Biology and Security
2022
Capture by hybridization for full‐length barcode‐based eukaryotic and prokaryotic biodiversity inventories of deep sea ecosystems
Molecular Ecology Resources
2022
Saint Peter and Saint Paul Archipelago barcoded: Fish diversity in the remoteness and DNA barcodes reference library for metabarcoding monitoring
Genetics and Molecular Biology
2022
DNA metabarcoding reveals the importance of gelatinous zooplankton in the diet ofPandalus borealis, a keystone species in the Arctic
Molecular Ecology
2022
Amplicon sequence variant-based meiofaunal community composition revealed by DADA2 tool is compatible with species composition
Marine Genomics
2022
Hide ‘n seq: Direct versus indirect metabarcoding of coral reef cryptic communities
Environmental DNA
2022
MetaCOXI: an integrated collection of metazoan mitochondrial cytochrome oxidase subunit-I DNA sequences
Database
2022
Benthic invertebrates in Svalbard fjords—when metabarcoding does not outperform traditional biodiversity assessment
PeerJ
2022
Mesozooplankton biodiversity, vertical assemblages, and diel migration in the western tropical Pacific Ocean revealed by eDNA metabarcoding and morphological methods
Frontiers in Marine Science
2022
Eukaryotic diversity of marine biofouling from coastal to offshore areas
Frontiers in Marine Science
2022
COI Metabarcoding Provides Insights into the Highly Diverse Diet of a Generalist Salamander, Salamandra salamandra (Caudata: Salamandridae)
Diversity
2022
Vegetation changes over the last centuries in the Lower Lake Constance region reconstructed from sediment‐core environmental DNA
Environmental DNA
2022
Sponging up diversity: Evaluating metabarcoding performance for a taxonomically challenging phylum within a complex cryptobenthic community
Environmental DNA
2022
Light and freshwater discharge drive the biogeochemistry and microbial ecology in a sub-Arctic fjord over the Polar night
Frontiers in Marine Science
2022
Metabarcoding hyperdiverse kelp holdfast communities on temperate reefs: An experimental approach to inform future studies
Environmental DNA
2022
Accumulation and diversity of airborne, eukaryotic environmental DNA
Environmental DNA
2022
Niche separation between two dominant crustacean predators in European estuarine soft-bottom habitats
Ecological Indicators
2022
For all audiences: Incorporating immature stages into standardised spider inventories has a major impact on the assessment of biodiversity patterns
Molecular Ecology Resources
2022
High-throughput sequencing reveals prey diversity overlap between sympatric Sulids in the tropical Atlantic
Food Webs
2021
Effectiveness assessment of using riverine water eDNA to simultaneously monitor the riverine and riparian biodiversity information
Scientific Reports
2021
All is fish that comes to the net: metabarcoding for rapid fisheries catch assessment
Ecological Applications
2021
Anthropogenic impact on the historical phytoplankton community of Lake Constance reconstructed by multimarker analysis of sediment‐core environmental DNA
Molecular Ecology
2021
Bat echolocation plasticity in allopatry: a call for caution in acoustic identification of Pipistrellus sp.
Behavioral Ecology and Sociobiology
2021
Bats as natural samplers: First record of the invasive pest rice water weevil Lissorhoptrus oryzophilus in the Iberian Peninsula
Crop Protection
2021
DNA Metabarcoding Methods for the Study of Marine Benthic Meiofauna: A Review
Frontiers in Marine Science
2021
Building on gAMBI in ports for a challenging biological invasions scenario: Blue-gNIS as a proof of concept
Marine Environmental Research
2021
To denoise or to cluster, that is not the question: optimizing pipelines for COI metabarcoding and metaphylogeography
BMC Bioinformatics
2021
Marine biomonitoring with eDNA: Can metabarcoding of water samples cut it as a tool for surveying benthic communities?
Molecular Ecology
2021
Environmental DNA metabarcoding for monitoring metazoan biodiversity in Antarctic nearshore ecosystems
PeerJ
2021
Metabarcoding as a quantitative tool for estimating biodiversity and relative biomass of marine zooplankton
ICES Journal of Marine Science
2021
Seasonal Variability in the Zooplankton Community Structure in a Sub-Arctic Fjord as Revealed by Morphological and Molecular Approaches
Frontiers in Marine Science
2021
Toward a global reference database of COI barcodes for marine zooplankton
Marine Biology
2021
Biases in bulk: DNA metabarcoding of marine communities and the methodology involved
Molecular Ecology
2021
Developing a non-destructive metabarcoding protocol for detection of pest insects in bulk trap catches
Scientific Reports
2021
Detection of Macrobenthos Species With Metabarcoding Is Consistent in Bulk DNA but Dependent on Body Size and Sclerotization in eDNA From the Ethanol Preservative
Frontiers in Marine Science
2021
Development of droplet digital Polymerase Chain Reaction assays for the detection of long-finned (Anguilla dieffenbachii) and short-finned (Anguilla australis) eels in environmental samples
PeerJ
2021
Integration of DNA-Based Approaches in Aquatic Ecological Assessment Using Benthic Macroinvertebrates
Water
2021
First report of mitochondrial COI in foraminifera and implications for DNA barcoding
Scientific Reports
2021
DNA metabarcoding marker choice skews perception of marine eukaryotic biodiversity
Environmental DNA
2021
Algal and cyanobacterial diversity in saline rivers of the Elton Lake Basin (Russia) studied via light microscopy and next-generation sequencing
Biosystems Diversity
2021
New insights into biodiversity, biogeography, ecology, and evolution of marine zooplankton based on molecular approaches
ICES Journal of Marine Science
2021
Early spring subglacial discharge plumes fuel under-ice primary production at a Svalbard tidewater glacier
The Cryosphere
2021
Trophic niche overlap between round sardinella (Sardinella aurita) and sympatric pelagic fish species in the Western Mediterranean
Ecology and Evolution
2021
Conservation of Mojave Desert springs and associated biota: status, threats, and policy opportunities
Biodiversity and Conservation
2021
Evaluation of DNA Extraction Methods and Bioinformatic Pipelines for Marine Nano- and Pico-Eukaryotic Plankton Analysis
Frontiers in Marine Science
2021
An Overview of DNA-Based Applications for the Assessment of Benthic Macroinvertebrates Biodiversity in Mediterranean Aquatic Ecosystems
Diversity
2021
Terrestrial Inputs Shape Coastal Bacterial and Archaeal Communities in a High Arctic Fjord (Isfjorden, Svalbard)
Frontiers in Microbiology
2021
Environmental DNA effectively captures functional diversity of coastal fish communities
Molecular Ecology
2021
Ferries and Environmental DNA: Underway Sampling From Commercial Vessels Provides New Opportunities for Systematic Genetic Surveys of Marine Biodiversity
Frontiers in Marine Science
2021
Pooling size sorted Malaise trap fractions to maximize taxon recovery with metabarcoding
PeerJ
2021
DNA metabarcoding of zooplankton communities: species diversity and seasonal variation revealed by 18S rRNA and COI
PeerJ
2021
Grab what you can—an evaluation of spatial replication to decrease heterogeneity in sediment eDNA metabarcoding
PeerJ
2021
Comparing species detection success between molecular markers in DNA metabarcoding of coastal macroinvertebrates
Metabarcoding and Metagenomics
2021
Testing small‐scale ecological gradients and intraspecific differentiation for hundreds of kelp forest species using haplotypes from metabarcoding
Molecular Ecology
2021
Metabarcoding as a tool to enhance marine surveillance of nonindigenous species in tropical harbors: A case study in Tahiti
Environmental DNA
2021
Seasonal turnover in community composition of stream‐associated macroinvertebrates inferred from freshwater environmental DNA metabarcoding
Environmental DNA
2021
The utility of environmental DNA from sediment and water samples for recovery of observed plant and animal species from four Mojave Desert springs
Environmental DNA
2021
Modelling technical and biological biases in macroinvertebrate community assessment from bulk preservative using multiple metabarcoding markers
Molecular Ecology
2021
Are well-studied marine biodiversity hotspots still blackspots for animal barcoding?
Global Ecology and Conservation
2021
Metabarcoding confirms the opportunistic foraging behaviour of Atlantic bluefin tuna and reveals the importance of gelatinous prey
PeerJ
2020
Exploring the potential of metabarcoding to disentangle macroinvertebrate community dynamics in intermittent streams
Metabarcoding and Metagenomics
2020
Temperature-dependent egg production and egg hatching rates of small egg-carrying and broadcast-spawning copepods Oithona similis, Microsetella norvegica and Microcalanus pusillus
Journal of Plankton Research
2020
MinION-in-ARMS: Nanopore Sequencing to Expedite Barcoding of Specimen-Rich Macrofaunal Samples From Autonomous Reef Monitoring Structures
Frontiers in Marine Science
2020
DNA Metabarcoding of Deep-Sea Sediment Communities Using COI: Community Assessment, Spatio-Temporal Patterns and Comparison with 18S rDNA
Diversity
2020
Environmental DNA surveys detect distinct metazoan communities across abyssal plains and seamounts in the western Clarion Clipperton Zone
Molecular Ecology
2020
Islands in the Sand
2020
Small-scale spatial variation of meiofaunal communities in Lima estuary (NW Portugal) assessed through metabarcoding
Estuarine, Coastal and Shelf Science
2020
Advances in metabarcoding techniques bring us closer to reliable monitoring of the marine benthos
Journal of Applied Ecology
2020
Accumulation curves of environmental DNA sequences predict coastal fish diversity in the coral triangle
Proceedings of the Royal Society B: Biological Sciences
2020
A trophic latitudinal gradient revealed in anchovy and sardine from the Western Mediterranean Sea using a multi-proxy approach
Scientific Reports
2020
A Molecular Approach to Explore the Background Benthic Fauna Around a Hydrothermal Vent and Their Larvae: Implications for Future Mining of Deep-Sea SMS Deposits
Frontiers in Marine Science
2020
From metabarcoding to metaphylogeography: separating the wheat from the chaff
Ecological Applications
2019
Bats as potential suppressors of multiple agricultural pests: A case study from Madagascar
Agriculture, Ecosystems & Environment
2019
DNAmetabarcoding unveils multiscale trophic variation in a widespread coastal opportunist
Molecular Ecology
2019
Validation of COI metabarcoding primers for terrestrial arthropods
PeerJ
2019
Metabarcoding of shrimp stomach content: Harnessing a natural sampler for fish biodiversity monitoring
Molecular Ecology Resources
2019
A global metabarcoding analysis expands molecular diversity of Platyhelminthes and reveals novel early-branching clades
Biology Letters
2019
New light in the dark - a proposed multidisciplinary framework for studying functional ecology of groundwater fauna
Science of The Total Environment
2019
Non‐specific amplification compromises environmental DNA metabarcoding with COI
Methods in Ecology and Evolution
2019
DNA metabarcoding reveals modern and past eukaryotic communities in a high-mountain peat bog system
Journal of Paleolimnology
2019
Biodiversity assessment of tropical shelf eukaryotic communities via pelagic eDNA metabarcoding
Ecology and Evolution
2019
Diversity and Distribution of Meroplanktonic Larvae in the Pacific Arctic and Connectivity With Adult Benthic Invertebrate Communities
Frontiers in Marine Science
2019
Establishing arthropod community composition using metabarcoding: Surprising inconsistencies between soil samples and preservative ethanol and homogenate from Malaise trap catches
Molecular Ecology Resources
2019
A comparison of droplet digital polymerase chain reaction (PCR), quantitative PCR and metabarcoding for species‐specific detection in environmental DNA
Molecular Ecology Resources
2019
Linking Environmental DNA and RNA for Improved Detection of the Marine Invasive Fanworm Sabella spallanzanii
Frontiers in Marine Science
2019
Past, present, and future perspectives of environmental DNA (eDNA) metabarcoding: A systematic review in methods, monitoring, and applications of global eDNA
Global Ecology and Conservation
2019
Detection of introduced and resident marine species using environmental DNA metabarcoding of sediment and water
Scientific Reports
2019
New mitochondrial primers for metabarcoding of insects, designed and evaluated using in silico methods
Molecular Ecology Resources
2019
Cobble community DNA as a tool to monitor patterns of biodiversity within kelp forest ecosystems
Molecular Ecology Resources
2019
Increased performance of DNA metabarcoding of macroinvertebrates by taxonomic sorting
PLOS ONE
2018
Multi-marker metabarcoding approach to study mesozooplankton at basin scale
Scientific Reports
2018
Combining morpho-taxonomy and metabarcoding enhances the detection of non-indigenous marine pests in biofouling communities
Scientific Reports
2018
Molecular gut content analysis of different spider body parts
PLOS ONE
2018
A DNA metabarcoding protocol for hyporheic freshwater meiofauna: Evaluating highly degenerate COI primers and replication strategy
Metabarcoding and Metagenomics
2018
Limited congruence exhibited across microbial, meiofaunal and macrofaunal benthic assemblages in a heterogeneous coastal environment
Scientific Reports
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