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2025	Comparative Analysis of the Complete Mitochondrial Genomes of Three Sisoridae (Osteichthyes, Siluriformes) and the Phylogenetic Relationships of Sisoridae Biochemical Genetics Yunpeng Wang, Shiyi Chen, Yifan Liu, Shufei Zhang, Xun Jin, Sixu Zheng, Jiasheng Li, Ying Peng, Kun Zhang, Chi Zhang, Bingjian Liu
2024	Codon usage patterns of the eleven SARS-CoV-2 variants with reference to the Wuhan sequence Gene Reports Md Samim Hassan, Syed Sahajada Mahafujul Alam, Arijit Samanta, Mehboob Hoque, Safdar Ali
2024	Codon usage bias analysis in the mitochondrial genomes of five Rhingia Scopoli (Diptera, Syrphidae, Eristalinae) species Gene Rui Zhao, Hu Li, Gang Wu, Yi-Fan Wang
2024	Understanding the nucleotide composition and patterns of codon usage in the expression of human oral cancer genes Mutation Research - Fundamental and Molecular Mechanisms of Mutagenesis Tarikul Huda Mazumder, Arif Uddin
2024	Molecular insights into codon usage analysis of mitochondrial fission and fusion gene: relevance to neurodegenerative diseases Annals of Medicine & Surgery Rekha Khandia, Megha Katare Pandey, Rajkumar Garg, Azmat Ali Khan, Igor Baklanov, Amer M. Alanazi, Prakash Nepali, Pankaj Gurjar, Om Prakash Choudhary
2023	Exploring the Mitogenomes of Mantodea: New Insights from Structural Diversity and Higher-Level Phylogenomic Analyses International Journal of Molecular Sciences Qinpeng Liu, Yingqi Liu, Qiaoqiao Liu, Li Tian, Hu Li, Fan Song, Wanzhi Cai
2023	Novel gene rearrangements in mitochondrial genomes of four families of praying mantises (Insecta, Mantodea) and phylogenetic relationships of Mantodea Gene Yi-Jie Lin, Li-Hua Zhang, Yue Ma, Kenneth B. Storey, Dan-Na Yu, Jia-Yong Zhang
2023	Comparative analysis of codon usage patterns and phylogenetic implications of five mitochondrial genomes of the genus Japanagallia Ishihara, 1955 (Hemiptera, Cicadellidae, Megophthalminae) PeerJ Min Li, Jiajia Wang, Renhuai Dai, Guy Smagghe, Xianyi Wang, Siying You
2023	Nine Mitochondrial Genomes of Phasmatodea with Two Novel Mitochondrial Gene Rearrangements and Phylogeny Insects Yani Yuan, Lihua Zhang, Ke Li, Yuehuan Hong, Kenneth B. Storey, Jiayong Zhang, Danna Yu
2022	Gaining insights into the compositional constraints and molecular phylogeny of five silkworms mitochondrial genome International Journal of Biological Macromolecules Ramin Abdoli, Tarikul Huda Mazumder, Shahla Nematollahian, Reza Sourati Zanjani, Rahim Abdollahi Mesbah, Arif Uddin
2022	Evolution of Gene Arrangements in the Mitogenomes of Ensifera and Characterization of the Complete Mitogenome of Schizodactylus jimo International Journal of Molecular Sciences Zhi-Cuo Dan, De-Long Guan, Tao Jiang, Hang Wang, Lu Zhao, Sheng-Quan Xu
2022	Mitochondrial genomes of 10 Mantidae species and their phylogenetic implications Archives of Insect Biochemistry and Physiology Wenjing Wang, Hui Wang, Huimin Huang, Yizheng Zhao, Zhijun Zhou
2022	Novel Gene Rearrangement in the Mitochondrial Genome of Three Garra and Insights Into the Phylogenetic Relationships of Labeoninae Frontiers in Genetics Chi Zhang, Kun Zhang, Ying Peng, Jianshe Zhou, Yifan Liu, Bingjian Liu
2022	Comparison of compositional constraints: Nuclear genome vs plasmid genome of Pseudomonas syringae pv. tomato DC3000 Journal of Biosciences Yengkhom Sophiarani, Supriyo Chakraborty
2022	Mitochondrial Phylogenomics Suggests Complex Evolutionary Pattern of Pronotal Foliaceous Mimicry in Hierodulinae (Mantodea: Mantidae), with Description of a New Species of Rhombodera Burmeister, 1838 from China Insects Qin-Peng Liu, Le Liang, Xin-Yang Zhang, Hao-Kun Li, Chu-Xiang Zhao, Xing-Yue Liu
2022	First Report on Mitochondrial Gene Rearrangement in Non-Biting Midges, Revealing a Synapomorphy in Stenochironomus Kieffer (Diptera: Chironomidae) Insects Chen-Guang Zheng, Zheng Liu, Yan-Min Zhao, Yang Wang, Wen-Jun Bu, Xin-Hua Wang, Xiao-Long Lin
2022	Phylogenetic Implication of Large Intergenic Spacers: Insights from a Mitogenomic Comparison of Prosopocoilus Stag Beetles (Coleoptera: Lucanidae) Animals Mengqiong Xu, Shiju Zhou, Xia Wan
2022	Cryptic Species Exist in Vietnamella sinensis Hsu, 1936 (Insecta: Ephemeroptera) from Studies of Complete Mitochondrial Genomes Insects Yao Tong, Lian Wu, Sam Pedro Galilee Ayivi, Kenneth B. Storey, Yue Ma, Dan-Na Yu, Jia-Yong Zhang
2022	Comparative analysis of the complete mitochondrial genomes of two species of Clupeiformes and the phylogenetic implications for Clupeiformes Journal of the Marine Biological Association of the United Kingdom Bingjian Liu, Ying Peng, Kun Zhang, Yifan Liu, Jiasheng Li, Jian Chen, Xuepeng Li, Xun Jin, Sixu Zheng, Yunpeng Wang, Shufei Zhang, Li Gong, Zhenming Lü, Liqin Liu
2022	Novel Mitochondrial Gene Rearrangement and Intergenic Regions Exist in the Mitochondrial Genomes from Four Newly Established Families of Praying Mantises (Insecta: Mantodea) Insects Yi-Jie Lin, Ling-Na Cai, Yu-Yang Zhao, Hong-Yi Cheng, Kenneth B. Storey, Dan-Na Yu, Jia-Yong Zhang
2022	The complete mitochondrial genome of Leptomantella tonkinae (Hebard, 1920) (Mantodea: Leptomantellidae) and its phylogeny Mitochondrial DNA Part B Yi-Jie Lin, Yu-Yang Zhao, Yong-Mei Yang, Wan-Ting Jin, Ling-Na Cai, Kenneth B. Storey, Jia-Yong Zhang, Dan-Na Yu
2021	Comprehensive Draft Genome Analyses of Three Rockfishes (Scorpaeniformes, Sebastiscus) via Genome Survey Sequencing Current Issues in Molecular Biology Chenghao Jia, Tianyan Yang, Takashi Yanagimoto, Tianxiang Gao
2021	Novel tRNA gene rearrangements in the mitochondrial genomes of praying mantises (Mantodea: Mantidae): Translocation, duplication and pseudogenization International Journal of Biological Macromolecules Xiao-Dong Xu, Jia-Yin Guan, Zi-Yi Zhang, Yu-Rou Cao, Kenneth B. Storey, Dan-Na Yu, Jia-Yong Zhang
2021	Insight into Codon Utilization Pattern of Tumor Suppressor Gene EPB41L3 from Different Mammalian Species Indicates Dominant Role of Selection Force Cancers Utsang Kumar, Rekha Khandia, Shailja Singhal, Nidhi Puranik, Meghna Tripathi, Atul Kumar Pateriya, Raju Khan, Talha Bin Emran, Kuldeep Dhama, Ashok Munjal, Taha Alqahtani, Ali M. Alqahtani
2021	Strategies and Patterns of Codon Bias in Molluscum Contagiosum Virus Pathogens Rahul Raveendran Nair, Manikandan Mohan, Gudepalya R. Rudramurthy, Reethu Vivekanandam, Panayampalli S. Satheshkumar
2021	Study on the Characteristic Codon Usage Pattern in Porcine Epidemic Diarrhea Virus Genomes and Its Host Adaptation Phenotype Frontiers in Microbiology Fusheng Si, Li Jiang, Ruisong Yu, Wenqiang Wei, Zhen Li
2021	Complete mitochondrial genomes of four species of praying mantises (Dictyoptera, Mantidae) with ribosomal second structure, evolutionary and phylogenetic analyses PLOS ONE Yan Shi, Lin-Yu Li, Qin-Peng Liu, Muhammad Yasir Ali, Zhong-Lin Yuan, Guy Smagghe, Tong-Xian Liu
2021	Insight into the Phylogenetic Relationships among Three Subfamilies within Heptageniidae (Insecta: Ephemeroptera) along with Low-Temperature Selection Pressure Analyses Using Mitogenomes Insects Xiao-Dong Xu, Jia-Yin Guan, Zi-Yi Zhang, Yu-Rou Cao, Yin-Yin Cai, Kenneth B. Storey, Dan-Na Yu, Jia-Yong Zhang
2021	Mitogenome Analysis of Four Lamiinae Species (Coleoptera: Cerambycidae) and Gene Expression Responses by Monochamus alternatus When Infected with the Parasitic Nematode, Bursaphelenchus mucronatus Insects Zi-Yi Zhang, Jia-Yin Guan, Yu-Rou Cao, Xin-Yi Dai, Kenneth B. Storey, Dan-Na Yu, Jia-Yong Zhang
2021	First complete mitogenomes of Diamesinae, Orthocladiinae, Prodiamesinae, Tanypodinae (Diptera: Chironomidae) and their implication in phylogenetics PeerJ Chen-Guang Zheng, Xiu-Xiu Zhu, Li-Ping Yan, Yuan Yao, Wen-Jun Bu, Xin-Hua Wang, Xiao-Long Lin
2020	Six complete mitochondrial genomes of mayflies from three genera of Ephemerellidae (Insecta: Ephemeroptera) with inversion and translocation oftrnIrearrangement and their phylogenetic relationships PeerJ Xiao-Dong Xu, Yi-Yang Jia, Si-Si Cao, Zi-Yi Zhang, Kenneth B. Storey, Dan-Na Yu, Jia-Yong Zhang
2020	The complete mitochondrial genome of Choroterpides apiculata (Ephemeroptera: Leptophlebiidae) and its phylogenetic relationships Mitochondrial DNA Part B Si-Si Cao, Xiao-Dong Xu, Yi-Yang Jia, Jia-Yin Guan, Kenneth B. Storey, Dan-Na Yu, Jia-Yong Zhang
2020	Selection constraints determine preference for A/U-ending codons in Taxus contorta Genome Aasim Majeed, Harpreet Kaur, Pankaj Bhardwaj
2020	The complete mitochondrial genome of Xanthomantis bimaculata (Mantodea: Iridopterygidae) and its phylogeny Mitochondrial DNA Part B Jia-Yin Guan, Yi-Yang Jia, Zi-Yi Zhang, Si-Si Cao, Jin-Liang Ma, Jia-Yong Zhang, Dan-Na Yu
2020	The complete mitochondrial genome ofAnnamanum lunulatum(Coleoptera: Lamiinae) and its phylogeny Mitochondrial DNA Part B Xin-Yi Dai, Huan Zhang, Xiao-Dong Xu, Yi-Yang Jia, Jia-Yong Zhang, Dan-Na Yu, Hong-Yi Cheng
2020	Comparative analysis of the complete mitochondrial genomes of three rockfishes (Scorpaeniformes,Sebastiscus) and insights into the phylogenetic relationships of Sebastidae Bioscience Reports Chenghao Jia, Xiumei Zhang, Shengyong Xu, Tianyan Yang, Takashi Yanagimoto, Tianxiang Gao
2020	Analysis of codon usage of severe acute respiratory syndrome corona virus 2 (SARS-CoV-2) and its adaptability in dog Virus Research Rupam Dutta, Lukumoni Buragohain, Probodh Borah
2019	The complete mitochondrial genome of Mantis religiosa (Mantodea: Mantidae) from Canada and its phylogeny Mitochondrial DNA Part B Yi-Yang Jia, Le-Ping Zhang, Xiao-Dong Xu, Xin-Yi Dai, Dan-Na Yu, Kenneth B. Storey, Jia-Yong Zhang
2019	The characteristics and phylogenetic relationship of two complete mitochondrial genomes of Matrona basilaris (Odonata: Zygoptera: Calopterygidae) Mitochondrial DNA Part B Deng-Yong Lan, Shi-Qi Shen, Yin-Yin Cai, Jun Wang, Jia-Yong Zhang, Kenneth B. Storey, Dan-Na Yu
2019	Analysis of Nipah Virus Codon Usage and Adaptation to Hosts Frontiers in Microbiology Rekha Khandia, Shailja Singhal, Utsang Kumar, Afzal Ansari, Ruchi Tiwari, Kuldeep Dhama, Jayashankar Das, Ashok Munjal, Raj Kumar Singh
2019	The complete mitochondrial genomes of five longicorn beetles (Coleoptera: Cerambycidae) and phylogenetic relationships within Cerambycidae PeerJ Jun Wang, Xin-Yi Dai, Xiao-Dong Xu, Zi-Yi Zhang, Dan-Na Yu, Kenneth B. Storey, Jia-Yong Zhang
2019	The complete mitochondrial genome ofXystrocera globosa(Coleoptera: Cerambycidae) and its phylogeny Mitochondrial DNA Part B Jun Wang, Deng-Yong Lan, Xin-Yi Dai, Dan-Na Yu, Kenneth B. Storey, Jia-Yong Zhang
2019	The mitochondrial genomes of Statilia maculata and S. nemoralis (Mantidae: Mantinae) with different duplications of trnR genes International Journal of Biological Macromolecules Le-Ping Zhang, Yue Ma, Dan-Na Yu, Kenneth B. Storey, Jia-Yong Zhang
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