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2025	Whole genome sequencing of Yersinia pestis isolates from Central Asian natural plague foci revealed the role of adaptation to different hosts and environmental conditions in shaping specific genotypes PLOS Neglected Tropical Diseases Aigul A. Abdirassilova, Duman T. Yessimseit, Altynai K. Kassenova, Beck Z. Abdeliyev, Zauresh B. Zhumadilova, Gulnara Zh. Tokmurziyeva, Galina G. Kovaleva, Ziyat Zh. Abdel, Tatiyana V. Meka-Mechenko, Saule K. Umarova, Elmira Zh. Begimbayeva, Sanzhar D. Agzam, Vladimir L. Motin, Oleg N. Reva, Altyn K. Rysbekova
2024	Insertion sequence elements and unique symmetrical genomic regions mediate chromosomal inversions in Streptococcus pyogenes Nucleic Acids Research Magnus G Jespersen, Andrew J Hayes, Steven Y C Tong, Mark R Davies
2023	An algebraic model for inversion and deletion in bacterial genome rearrangement Journal of Mathematical Biology Chad Clark, Julius Jonušas, James D. Mitchell, Andrew Francis
2022	Genomic structural plasticity of rodent‐associated Bartonella in nature Molecular Ecology Keyla Carstens Marques de Sousa, Ricardo Gutiérrez, Dayana Yahalomi, Tali Shalit, Barak Markus, Yaarit Nachum‐Biala, Hadas Hawlena, Evgeniya Marcos‐Hadad, Einat Hazkani‐Covo, Haroldo Henrique de Rezende Neves, Shay Covo, Shimon Harrus
2021	Insights into the individual evolutionary origins of Yersinia virulence factor effector proteins Plasmid Veronica R. Moorman, James I. Cohen
2021	High Rates of Genome Rearrangements and Pathogenicity of Shigella spp. Frontiers in Microbiology Zaira Seferbekova, Alexey Zabelkin, Yulia Yakovleva, Robert Afasizhev, Natalia O. Dranenko, Nikita Alexeev, Mikhail S. Gelfand, Olga O. Bochkareva
2019	Micro-evolution of three Streptococcus species: selection, antigenic variation, and horizontal gene inflow BMC Evolutionary Biology Pavel V. Shelyakin, Olga O. Bochkareva, Anna A. Karan, Mikhail S. Gelfand
2018	Pathogenicity, population genetics and dissemination of Bacillus anthracis Infection, Genetics and Evolution Paola Pilo, Joachim Frey
2018	Genome rearrangements and selection in multi-chromosome bacteria Burkholderia spp. BMC Genomics Olga O. Bochkareva, Elena V. Moroz, Iakov I. Davydov, Mikhail S. Gelfand
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