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2025
Gellan gum-sialoglycan conjugates: a mucin mimic for alleviating inflammation in Caco-2 cells and modulating gut microbiota in the elderly
International Journal of Biological Macromolecules
2025
In vitro gut-models to elucidate how human milk oligosaccharides shape the gut microbiota
Journal of Functional Foods
2025
From Bioreactors to Organoids: Tools for Culturing and Understanding Microbiota
Indian Journal of Microbiology
2025
Effects of calcium supplementation on the composition and activity of in vitro simulated gut microbiome during inulin fermentation
Food & Function
2024
Propionate Production by Infant Fecal Microbiota Is Inversely Correlated with the Protein Glycation Level of Supplemented Infant Formula Ex Vivo
Nutrients
2024
Linking human milk oligosaccharide metabolism and early life gut microbiota: bifidobacteria and beyond
Microbiology and Molecular Biology Reviews
2024
Current examining methods and mathematical models of horizontal transfer of antibiotic resistance genes in the environment
Frontiers in Microbiology
2024
The effect of in vitro simulated colonic pH gradients on microbial activity and metabolite production using common prebiotics as substrates
BMC Microbiology
2024
PETR: A novel peristaltic mixed tubular bioreactor simulating human colonic conditions
Biotechnology and Bioengineering
2024
Simulator of the Human Intestinal Microbial Ecosystem (SHIME®): Current Developments, Applications, and Future Prospects
Pharmaceuticals
2024
Synergistic activity of Limosilactobacillus reuteri KUB-AC5 and water-based plants against Salmonella challenge in a human in vitro gut model
Scientific Reports
2024
Dairy-based multi-strain probiotic community successfully mitigated obesity-related gut microbiota dysbiosis in vitro (CoMiniGut)
Journal of Medical Microbiology
2024
Maternal short chain fructo-oligosaccharides supplementation during late gestation and lactation influences milk components and offspring gut metabolome: a pilot study
Scientific Reports
2024
Development of an infant colon simulating in vitro model, I-TIM-2, to study the effects of modulation strategies on the infant gut microbiome composition and function
Microbiology Spectrum
2024
Variations in colostrum metabolite profiles in association with sow parity
Translational Animal Science
2024
In Vitro Human Gastrointestinal Tract Simulation Systems: A Panoramic Review
Probiotics and Antimicrobial Proteins
2023
Impact Assessment of vB_KpnP_K1-ULIP33 Bacteriophage on the Human Gut Microbiota Using a Dynamic In Vitro Model
Viruses
2023
Age-related effects on the modulation of gut microbiota by pectins and their derivatives: an in vitro study
Frontiers in Microbiology
2023
Soluble, Diferuloylated Corn Bran Glucuronoarabinoxylans Modulate the Human Gut Microbiota In Vitro
Journal of Agricultural and Food Chemistry
2023
The Effect of Human Milk Oligosaccharides and Bifidobacterium longum subspecies infantis Bi-26 on Simulated Infant Gut Microbiome and Metabolites
Microorganisms
2023
The translational roadmap of the gut models, focusing on gut-on-chip
Open Research Europe
2023
Evidence of the Beneficial Impact of Three Probiotic-Based Food Supplements on the Composition and Metabolic Activity of the Intestinal Microbiota in Healthy Individuals: An Ex Vivo Study
Nutrients
2023
Effect of processing on in vitro digestibility (IVPD) of food proteins
Critical Reviews in Food Science and Nutrition
2023
Microbiota-dependent influence of prebiotics on the resilience of infant gut microbiota to amoxicillin/clavulanate perturbation in an in vitro colon model
Frontiers in Microbiology
2023
Infant Fecal Fermentations with Galacto-Oligosaccharides and 2′-Fucosyllactose Show Differential Bifidobacterium longum Stimulation at Subspecies Level
Children
2022
Metabolic fate of dietary sialic acid and its influence on gut and oral bacteria
Systems Microbiology and Biomanufacturing
2022
Exploring species-level infant gut bacterial biodiversity by meta-analysis and formulation of an optimized cultivation medium
npj Biofilms and Microbiomes
2022
Impact of the Gram-Negative-Selective Inhibitor MAC13243 on In Vitro Simulated Gut Microbiota
Pharmaceuticals
2022
Role, relevance, and possibilities of in vitro fermentation models in human dietary, and gut‐microbial studies
Biotechnology and Bioengineering
2022
Structure and function of non-digestible carbohydrates in the gut microbiome
Beneficial Microbes
2022
A Bacteriophage Cocktail Significantly Reduces Listeria monocytogenes without Deleterious Impact on the Commensal Gut Microbiota under Simulated Gastrointestinal Conditions
Viruses
2022
In vitro models of gut digestion across childhood: current developments, challenges and future trends
Biotechnology Advances
2022
Open source anaerobic and temperature-controlled in vitro model enabling real-time release studies with live bacteria
HardwareX
2022
Prebiotic potential of apple pomace and pectins from different apple varieties: Modulatory effects on key target commensal microbial populations
Food Hydrocolloids
2022
Alterations in Healthy Adult Canine Faecal Microbiome and Selected Metabolites as a Result of Feeding a Commercial Complete Synbiotic Diet with Enterococcus faecium NCIMB 10415
Animals
2022
A child is not an adult: development of a new in vitro model of the toddler colon
Applied Microbiology and Biotechnology
2022
Modulating the Gut Microbiota with Alginate Oligosaccharides In Vitro
Nutraceuticals
2021
The translational roadmap of the gut models, focusing on gut-on-chip
Open Research Europe
2021
Ecological Adaptation and Succession of Human Fecal Microbial Communities in an Automated In Vitro Fermentation System
mSystems
2021
High throughput in vitro characterization of pectins for pig(let) nutrition
Animal Microbiome
2021
In vitro models to evaluate ingestible devices: Present status and current trends
Advanced Drug Delivery Reviews
2021
Looking into the future of phage-based control of zoonotic pathogens in food and animal production
Current Opinion in Biotechnology
2021
Screening of probiotic candidates in a simulated piglet small intestine in vitro model
FEMS Microbiology Letters
2021
An in vitro batch fermentation protocol for studying the contribution of food to gut microbiota composition and functionality
Nature Protocols
2021
Significance of fucose in intestinal health and disease
Molecular Microbiology
2020
A Multi-Omics Approach Reveals New Signatures in Obese Allergic Asthmatic Children
Biomedicines
2020
Effects of Human Milk Oligosaccharides on the Adult Gut Microbiota and Barrier Function
Nutrients
2020
Assessment of Gram- and Viability-Staining Methods for Quantifying Bacterial Community Dynamics Using Flow Cytometry
Frontiers in Microbiology
2020
Human milk and mucosa-associated disaccharides impact on cultured infant fecal microbiota
Scientific Reports
2020
Variations in porcine colostrum oligosaccharide composition between breeds and in association with sow maternal performance
Journal of Animal Science and Biotechnology
2019
Editorial: Microbial food and feed ingredients – reconciling tradition and novelty
FEMS Microbiology Letters
2019
The potential of pectin to impact pig nutrition and health: feeding the animal and its microbiome
FEMS Microbiology Letters
2019
Fate of CMY-2-Encoding Plasmids Introduced into the Human Fecal Microbiota by Exogenous Escherichia coli
Antimicrobial Agents and Chemotherapy
2019
Lactose and Bovine Milk Oligosaccharides Synergistically Stimulate B. longum subsp. longum Growth in a Simplified Model of the Infant Gut Microbiome
Journal of Proteome Research
2019
Models of the Gut for Analyzing the Impact of Food and Drugs
Advanced Healthcare Materials
2019
The effect of 2′-fucosyllactose on simulated infant gut microbiome and metabolites; a pilot study in comparison to GOS and lactose
Scientific Reports
2019
A Small In Vitro Fermentation Model for Screening the Gut Microbiota Effects of Different Fiber Preparations
International Journal of Molecular Sciences
2019
Lactulose: Patient- and dose-dependent prebiotic properties in humans
Anaerobe
2019
Inulin Ameliorates Alcoholic Liver Disease via Suppressing LPS‐TLR4‐Mψ Axis and Modulating Gut Microbiota in Mice
Alcoholism: Clinical and Experimental Research
2018
A culture-independent method for studying transfer of IncI1 plasmids from wild-type Escherichia coli in complex microbial communities
Journal of Microbiological Methods
2018
The Use of a Mini-Bioreactor Fermentation System as a Reproducible, High-Throughput ex vivo Batch Model of the Distal Colon
Frontiers in Microbiology
2018
Evaluation of Sialyllactose Supplementation of a Prebiotic-Containing Formula on Growth, Intestinal Development, and Bacterial Colonization in the Neonatal Piglet
Current Developments in Nutrition
2018
The Smallest Intestine (TSI)—a low volume in vitro model of the small intestine with increased throughput
FEMS Microbiology Letters
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