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2024
The Combination of Low-Cost, Red–Green–Blue (RGB) Image Analysis and Machine Learning to Screen for Barley Plant Resistance to Net Blotch
Plants
2024
Digital Agriculture
2024
Multilevel analysis between Physcomitrium patens and Mortierellaceae endophytes explores potential long‐standing interaction among land plants and fungi
The Plant Journal
2024
Non‐destructive, whole‐plant phenotyping reveals dynamic changes in water use efficiency, photosynthesis, and rhizosphere acidification of sorghum accessions under osmotic stress
Plant Direct
2024
Imprinting but not cytonuclear interactions determines seed size heterosis in Arabidopsis hybrids
Plant Physiology
2024
Advancements in Imaging Sensors and AI for Plant Stress Detection: A Systematic Literature Review
Plant Phenomics
2024
Genetic analysis of cassava brown streak disease root necrosis using image analysis and genome-wide association studies
Frontiers in Plant Science
2024
Natural variation in Brachypodium distachyon responses to combined abiotic stresses
The Plant Journal
2024
Physcomitrium patens response to elevated CO2 is flexible and determined by an interaction between sugar and nitrogen availability
New Phytologist
2024
International Conference on Road and Airfield Pavement Technology 2023
2024
Proceedings of the 29th International Conference on Intelligent User Interfaces
2024
Plant Resistance to Insects in Major Field Crops
2024
Towards increased shading capacity: A combined phenotypic and genetic analysis of rice shoot architecture
PLANTS, PEOPLE, PLANET
2024
A scalable, low‐cost phenotyping strategy to assess tuber size, shape, and the colorimetric features of tuber skin and flesh in potato breeding populations
The Plant Phenome Journal
2024
Image Processing and Analysis for Biotechnology and Bioprocess Engineering
Applied Sciences
2024
Quantitative analysis of lateral root development with time-lapse imaging and deep neural network
Quantitative Plant Biology
2023
Machine learning classification of plant genotypes grown under different light conditions through the integration of multi-scale time-series data
Computational and Structural Biotechnology Journal
2023
ShinyFruit: interactive fruit phenotyping software and its application in blackberry
Frontiers in Plant Science
2023
Towards automated detection of hyperhydricity in plant in vitro culture
Plant Cell, Tissue and Organ Culture (PCTOC)
2023
The plant response to high CO2 levels is heritable and orchestrated by DNA methylation
New Phytologist
2023
RGB image-based method for phenotyping rust disease progress in pea leaves using R
Plant Methods
2023
A rapid method to quantify vein density in C4 plants using starch staining
Plant, Cell & Environment
2023
Drought stress detection technique for wheat crop using machine learning
PeerJ Computer Science
2023
Utilization of Imaging Approaches to Understand Chenopodium quinoa, a Model Plant to Study Salt Stress
Microscopy and Microanalysis
2023
Quantifying physiological trait variation with automated hyperspectral imaging in rice
Frontiers in Plant Science
2023
PhytoOracle: Scalable, modular phenomics data processing pipelines
Frontiers in Plant Science
2023
TubAR: an R Package for Quantifying Tuber Shape and Skin Traits from Images
American Journal of Potato Research
2023
Reviving grain quality in wheat through non‐destructive phenotyping techniques like hyperspectral imaging
Food and Energy Security
2023
Automated extraction of seed morphological traits from images
Methods in Ecology and Evolution
2023
Analyzing architectural diversity in maize plants using the skeleton-image-based method
Journal of Integrative Agriculture
2023
The Olive
2023
Advances in Agronomy
2023
Scalable agritech growbox architecture
Frontiers in the Internet of Things
2023
Towards rapid and automated vulnerability classification of concrete buildings
Earthquake Engineering and Engineering Vibration
2023
A temporal analysis and response to nitrate availability of 3D root system architecture in diverse pennycress (Thlaspi arvense L.) accessions
Frontiers in Plant Science
2023
Analyzing angiogenesis on a chip using deep learning-based image processing
Lab on a Chip
2023
An image‐based technique for automated root disease severity assessment using PlantCV
Applications in Plant Sciences
2023
A novel image‐based approach for soybean seed phenotyping using machine learning techniques
Crop Science
2023
Morley: Image Analysis and Evaluation of Statistically Significant Differences in Geometric Sizes of Crop Seedlings in Response to Biotic Stimulation
Agronomy
2023
Large-Scale and High-Accuracy Phenotyping of Populus simonii Leaves Using the Colony Counter and OpenCV
Forests
2023
Impact of xylan on field productivity and wood saccharification properties in aspen
Frontiers in Plant Science
2023
HopBox: An image analysis pipeline to characterize hop cone morphology
The Plant Phenome Journal
2023
A Synthetic Review of Various Dimensions of Non-Destructive Plant Stress Phenotyping
Plants
2023
AI-Assisted Assessment of Wound Tissue with Automatic Color and Measurement Calibration on Images Taken with a Smartphone
Healthcare
2023
Different combinations of laccase paralogs nonredundantly control the amount and composition of lignin in specific cell types and cell wall layers in Arabidopsis
The Plant Cell
2023
Indicators of water use efficiency across diverse agroecosystems and spatiotemporal scales
Science of The Total Environment
2023
Low-cost and automated phenotyping system “Phenomenon” for multi-sensor in situ monitoring in plant in vitro culture
Plant Methods
2022
Artificial intelligence‐based measurement outperforms current methods for colorectal polyp size measurement
Digestive Endoscopy
2022
A protocol for Chenopodium quinoa pollen germination
Plant Methods
2022
Capturing crop adaptation to abiotic stress using image-based technologies
Open Biology
2022
Methods in Molecular Biology
2022
Exploiting High-Throughput Indoor Phenotyping to Characterize the Founders of a Structured B. napus Breeding Population
Frontiers in Plant Science
2022
Growth-limiting drought stress induces time-of-day-dependent transcriptome and physiological responses in hybrid poplar
AoB PLANTS
2022
CRISPR/Cas9‐mediated tetra‐allelic mutation of the ‘Green Revolution’ SEMIDWARF‐1 (SD‐1) gene confers lodging resistance in tef (Eragrostis tef)
Plant Biotechnology Journal
2022
Stb6 mediates stomatal immunity, photosynthetic functionality, and the antioxidant system during the Zymoseptoria tritici-wheat interaction
Frontiers in Plant Science
2022
A Comparison of High-Throughput Imaging Methods for Quantifying Plant Growth Traits and Estimating Above-Ground Biomass Accumulation
SSRN Electronic Journal
2022
Effects of Poty-Potexvirus Synergism on Growth, Photosynthesis and Metabolite Status of Nicotiana benthamiana
Viruses
2022
Multi-omic analysis showsREVEILLEclock genes are involved in carbohydrate metabolism and proteasome function
Plant Physiology
2022
Genetic variation underlying differential ammonium and nitrate responses in Arabidopsis thaliana
The Plant Cell
2022
Methods in Molecular Biology
2022
Methods in Molecular Biology
2022
HSI-PP: A flexible open-source software for hyperspectral imaging-based plant phenotyping
Computers and Electronics in Agriculture
2022
Advances in field-based high-throughput photosynthetic phenotyping
Journal of Experimental Botany
2022
Scanning the rice Global MAGIC population for dynamic genetic control of seed traits under vegetative drought
The Plant Phenome Journal
2022
Sustainable Crop Productivity and Quality Under Climate Change
2022
Methods in Molecular Biology
2022
A Comparison of High-Throughput Imaging Methods for Quantifying Plant Growth Traits and Estimating Above-Ground Biomass Accumulation
SSRN Electronic Journal
2022
Methods in Molecular Biology
2022
Automated imaging of duckweed growth and development
Plant Direct
2022
JustDeepIt: Software tool with graphical and character user interfaces for deep learning-based object detection and segmentation in image analysis
Frontiers in Plant Science
2022
Springer Optimization and Its Applications
2022
A low‐cost high‐throughput phenotyping system for automatically quantifying foliar area and greenness
Applications in Plant Sciences
2022
A comparison of ImageJ and machine learning based image analysis methods to measure cassava bacterial blight disease severity
Plant Methods
2022
Novel method for the quantification of rosette area from images of Arabidopsis seedlings grown on agar plates
Applications in Plant Sciences
2022
Uncovering natural variation in root system architecture and growth dynamics using a robotics-assisted phenomics platform
eLife
2022
A comparison of high-throughput imaging methods for quantifying plant growth traits and estimating above-ground biomass accumulation
European Journal of Agronomy
2022
Leaf Count Aided Novel Framework for Rice (Oryza sativa L.) Genotypes Discrimination in Phenomics: Leveraging Computer Vision and Deep Learning Applications
Plants
2022
Thermal remote sensing for plant ecology from leaf to globe
Journal of Ecology
2022
Abscisic acid‐controlled redox proteome of Arabidopsis and its regulation by heterotrimeric Gβ protein
New Phytologist
2022
EarCV: An open‐source, computer vision package for maize ear phenotyping
The Plant Phenome Journal
2022
Fenotipo de plantas de maíz con efecto del herbicida mesotrione
Revista Mexicana de Ciencias Agrícolas
2021
Fully Leveraging Deep Learning Methods for Constructing Retinal Fundus Photomontages
Applied Sciences
2021
Computer Vision, Machine Learning, and the Promise of Phenomics in Ecology and Evolutionary Biology
Frontiers in Ecology and Evolution
2021
Molecular Breeding for Rice Abiotic Stress Tolerance and Nutritional Quality
2021
KAT4IA: K-Means Assisted Training for Image Analysis of Field-Grown Plant Phenotypes
Plant Phenomics
2021
Reducing shade avoidance can improve Arabidopsis canopy performance against competitors
Plant, Cell & Environment
2021
Genetic components of consumer liking based on visual appearance of leaf types in Brassica vegetables
Euphytica
2021
Open source 3D phenotyping of chickpea plant architecture across plant development
Plant Methods
2021
Developmental plasticity in Arabidopsis thaliana under combined cold and water deficit stresses during flowering stage
Planta
2021
Lettuce Growth Pattern Analysis Using U-Net Pre-Trained with Arabidopsis
Agriculture
2021
Ready, Steady, Go AI: A practical tutorial on fundamentals of artificial intelligence and its applications in phenomics image analysis
Patterns
2021
Maize-IAS: a maize image analysis software using deep learning for high-throughput plant phenotyping
Plant Methods
2021
Grid Screener: A Tool for Automated High-Throughput Screening on Biochemical and Biological Analysis Platforms
IEEE Access
2021
High-throughput phenotyping analysis of maize at the seedling stage using end-to-end segmentation network
PLOS ONE
2021
Using a Hybrid Neural Network Model DCNN–LSTM for Image-Based Nitrogen Nutrition Diagnosis in Muskmelon
Horticulturae
2021
Automation of leaf counting in maize and sorghum using deep learning
The Plant Phenome Journal
2021
Multi-dimensional leaf phenotypes reflect root system genotype in grafted grapevine over the growing season
GigaScience
2021
3D reconstruction identifies loci linked to variation in angle of individual sorghum leaves
PeerJ
2021
Images carried before the fire: The power, promise, and responsibility of latent phenotyping in plants
The Plant Phenome Journal
2021
High throughput screening of native species for tailings eco-restoration using novel computer visualization for plant phenotyping
Science of The Total Environment
2021
Development and Implementation of an IoT-Enabled Optimal and Predictive Lighting Control Strategy in Greenhouses
Plants
2021
DeepCob: precise and high-throughput analysis of maize cob geometry using deep learning with an application in genebank phenomics
Plant Methods
2021
Review: Application of Artificial Intelligence in Phenomics
Sensors
2021
Deep-Learning Crack Analysis for Visual-Safety Inspection of Bridge by Drones
The Journal of Korean Institute of Information Technology
2021
SeedExtractor: An Open-Source GUI for Seed Image Analysis
Frontiers in Plant Science
2021
DEAD-box helicases modulate dicing body formation in Arabidopsis
Science Advances
2021
PhenoImage: An open‐source graphical user interface for plant image analysis
The Plant Phenome Journal
2021
Automatic Fruit Morphology Phenome and Genetic Analysis: An Application in the Octoploid Strawberry
Plant Phenomics
2021
Quantitative dissection of color patterning in the foliar ornamental coleus
Plant Physiology
2020
Plant Phenomics: Fundamental Bases, Software and Hardware Platforms, and Machine Learning
Russian Journal of Plant Physiology
2020
An Efficient Processing Approach for Colored Point Cloud-Based High-Throughput Seedling Phenotyping
Remote Sensing
2020
Nondestructive automated workflow for analyzing diverse leaf morphologies using computed tomography
The Plant Phenome Journal
2020
Encyclopedia of Life Sciences
2020
Generating segmentation masks of herbarium specimens and a data set for training segmentation models using deep learning
Applications in Plant Sciences
2020
An embedded system for the automated generation of labeled plant images to enable machine learning applications in agriculture
PLOS ONE
2020
Dicer-like 5 deficiency confers temperature-sensitive male sterility in maize
Nature Communications
2020
Schrödinger's phenotypes: Herbarium specimens show two‐dimensional images are both good and (not so) bad sources of morphological data
Methods in Ecology and Evolution
2020
2020 IEEE Global Conference on Artificial Intelligence and Internet of Things (GCAIoT)
2020
2020 IEEE International Women in Engineering (WIE) Conference on Electrical and Computer Engineering (WIECON-ECE)
2020
Automated Methods Enable Direct Computation on Phenotypic Descriptions for Novel Candidate Gene Prediction
Frontiers in Plant Science
2020
Greenotyper: Image-Based Plant Phenotyping Using Distributed Computing and Deep Learning
Frontiers in Plant Science
2020
Leaf Angle eXtractor: A high‐throughput image processing framework for leaf angle measurements in maize and sorghum
Applications in Plant Sciences
2020
Versatile method for quantifying and analyzing morphological differences in experimentally obtained images
Plant Signaling & Behavior
2020
Lecture Notes in Computer Science
2020
The Plant Family Fabaceae
2020
Affordable Phenotyping of Winter Wheat under Field and Controlled Conditions for Drought Tolerance
Agronomy
2020
Image-Based, Organ-Level Plant Phenotyping for Wheat Improvement
Agronomy
2020
Bioinformatics-assisted, integrated omics studies on medicinal plants
Briefings in Bioinformatics
2020
Voxel carving‐based 3D reconstruction of sorghum identifies genetic determinants of light interception efficiency
Plant Direct
2020
Characterization of the response to abiotic stresses of high ascorbate Arabidopsis lines using phenomic approaches
Plant Physiology and Biochemistry
2020
Heating quinoa shoots results in yield loss by inhibiting fruit production and delaying maturity
The Plant Journal
2020
Modern imaging techniques in plant nutrition analysis: A review
Computers and Electronics in Agriculture
2020
A High-Throughput Phenotyping Pipeline for Image Processing and Functional Growth Curve Analysis
Plant Phenomics
2020
Species-independent analytical tools for next-generation agriculture
Nature Plants
2020
Plant segmentation by supervised machine learning methods
The Plant Phenome Journal
2019
Morphometric and colourimetric tools to dissect morphological diversity: an application in sweet potato [Ipomoea batatas (L.) Lam.]
Genetic Resources and Crop Evolution
2019
Artificial neural network for estimating leaf fresh weight of rice plant through visual-nir imaging
The Indian Journal of Agricultural Sciences
2019
Affordable remote monitoring of plant growth in facilities using Raspberry Pi computers
Applications in Plant Sciences
2019
Application of analysis software to pipeline stress in engineering design
Journal of Computational Methods in Sciences and Engineering
2019
Convolutional Neural Net-Based Cassava Storage Root Counting Using Real and Synthetic Images
Frontiers in Plant Science
2019
3D point cloud data to quantitatively characterize size and shape of shrub crops
Horticulture Research
2019
Non-Invasive Sensing of Nitrogen in Plant Using Digital Images and Machine Learning for Brassica Campestris ssp. Chinensis L.
Sensors
2019
Greenhouse environment modeling and simulation for microclimate control
Computers and Electronics in Agriculture
2019
Contour analysis for interpretable leaf shape category discovery
Plant Methods
2019
Diagnosis of Plant Cold Damage Based on Hyperspectral Imaging and Convolutional Neural Network
IEEE Access
2019
Classifying cold‐stress responses of inbred maize seedlings using RGB imaging
Plant Direct
2019
Salt stress under the scalpel – dissecting the genetics of salt tolerance
The Plant Journal
2019
Proceedings of the 2019 2nd International Conference on Algorithms, Computing and Artificial Intelligence
2019
3D Digitization in Functional Morphology: Where is the Point of Diminishing Returns?
Integrative and Comparative Biology
2019
Fluctuating light experiments and semi-automated plant phenotyping enabled by self-built growth racks and simple upgrades to the IMAGING-PAM
Plant Methods
2019
Removal of greenhouse microclimate heterogeneity with conveyor system for indoor phenotyping
Computers and Electronics in Agriculture
2019
Modeling Crop Genetic Resources Phenotyping Information Systems
Frontiers in Plant Science
2019
An Overlapping-Free Leaf Segmentation Method for Plant Point Clouds
IEEE Access
2018
Leaf Segmentation on Dense Plant Point Clouds with Facet Region Growing
Sensors
2018
The HTPmod Shiny application enables modeling and visualization of large-scale biological data
Communications Biology
2018
Conventional and hyperspectral time-series imaging of maize lines widely used in field trials
GigaScience
2018
Raspberry
2018
Engineering plants for tomorrow: how high-throughput phenotyping is contributing to the development of better crops
Phytochemistry Reviews
2018
Pheno‐Deep Counter: a unified and versatile deep learning architecture for leaf counting
The Plant Journal
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