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2025
Adapting to hypo-salinity: Molecular mechanisms in giant clams and symbionts with implications for coral reef resilience under climate change
Environmental Research
2025
Coral Reefs of the World
2024
Molecular identification of dinoflagellates symbionts (Zooxanthellae) in corals of the Jordanian Gulf of Aqaba, Red Sea
Regional Studies in Marine Science
2024
Identification of phytoplankton isolates from the eastern Canadian waters using long-read sequencing
Journal of Plankton Research
2023
The highly developed symbiotic system between the solar-powered nudibranch Pteraeolidia semperi and Symbiodiniacean algae
iScience
2023
Building consensus around the assessment and interpretation of Symbiodiniaceae diversity
PeerJ
2022
Nitric oxide production rather than oxidative stress and cell death is associated with the onset of coral bleaching in Pocillopora acuta
PeerJ
2022
Endobiotic microalgae in molluscan life
Fisheries and Aquatic Sciences
2022
Cnidarian-Symbiodiniaceae symbiosis establishment is independent of photosynthesis
Current Biology
2022
The coral symbiont Candidatus Aquarickettsia is variably abundant in threatened Caribbean acroporids and transmitted horizontally
The ISME Journal
2022
Cryopreservation of six Symbiodiniaceae genera and assessment of fatty acid profiles in response to increased salinity treatments
Scientific Reports
2022
Species richness and generalists–specialists mosaicism of symbiodiniacean symbionts in corals from Hong Kong revealed by high-throughput ITS sequencing
Coral Reefs
2022
Alignment-Free Analysis of Whole-Genome Sequences From Symbiodiniaceae Reveals Different Phylogenetic Signals in Distinct Regions
Frontiers in Plant Science
2022
Diversity and distribution of Symbiodiniaceae detected on coral reefs of Lombok, Indonesia using environmental DNA metabarcoding
PeerJ
2022
Gene clusters for biosynthesis of mycosporine‐like amino acids in dinoflagellate nuclear genomes: Possible recent horizontal gene transfer between species of Symbiodiniaceae (Dinophyceae)
Journal of Phycology
2022
Using RDNA sequences to define dinoflagellate species
PLOS ONE
2022
Cophylogeny and specificity between cryptic coral species (Pocillopora spp.) at Mo′orea and their symbionts (Symbiodiniaceae)
Molecular Ecology
2021
Global-Scale Diversity and Distribution Characteristics of Reef-Associated Symbiodiniaceae via the Cluster-Based Parsimony of Internal Transcribed Spacer 2 Sequences
Journal of Ocean University of China
2021
Symbiotic Models for Reconstruction of Organellogenesis
Russian Journal of Genetics
2021
Photobleaching and Recovery of Symbiodiniaceae Effrenium voratum SCS01 Reveals Life Form Transformation Under Thermal Stress
Frontiers in Marine Science
2021
A New Dinoflagellate Genome Illuminates a Conserved Gene Cluster Involved in Sunscreen Biosynthesis
Genome Biology and Evolution
2021
Unique environmental Symbiodiniaceae diversity at an isolated island in the northwestern Pacific
Molecular Phylogenetics and Evolution
2021
Microbiomes of Healthy and Bleached Corals During a 2016 Thermal Bleaching Event in the Upper Gulf of Thailand
Frontiers in Marine Science
2021
Differential Symbiodiniaceae Association With Coral and Coral-Eroding Sponge in a Bleaching Impacted Marginal Coral Reef Environment
Frontiers in Marine Science
2021
Miliolidium n. gen, a New Symbiodiniacean Genus Whose Members Associate with Soritid Foraminifera or Are Free‐Living
Journal of Eukaryotic Microbiology
2020
Foraminiferal holobiont thermal tolerance under future warming – roommate problems or successful collaboration?
Biogeosciences
2020
Description of Freudenthalidium gen. nov. and Halluxium gen. nov. to Formally Recognize Clades Fr3 and H as Genera in the Family Symbiodiniaceae (Dinophyceae)
Journal of Phycology
2020
Uncovering the role of Symbiodiniaceae assemblage composition and abundance in coral bleaching response by minimizing sampling and evolutionary biases
BMC Microbiology
2020
Cryptic lineages respond differently to coral bleaching
Molecular Ecology
2020
Genome Size, rDNA Copy, and qPCR Assays for Symbiodiniaceae
Frontiers in Microbiology
2020
Metabarcoding reveals distinct microbiotypes in the giant clam Tridacna maxima
Microbiome
2020
Symbiodiniaceae diversity of Palythoa tuberculosa in the central and southern Red Sea influenced by environmental factors
Coral Reefs
2020
The contribution of stress-tolerant endosymbiotic dinoflagellate Durusdinium to Pocillopora acuta survival in a highly urbanized reef system
Coral Reefs
2020
Results and Problems in Cell Differentiation
2020
Divergent symbiont communities determine the physiology and nutrition of a reef coral across a light-availability gradient
The ISME Journal
2020
Presence and Genetic Identity of Symbiodiniaceae in the Bioeroding Sponge Genera Cliona and Spheciospongia (Clionaidae) in the Spermonde Archipelago (SW Sulawesi), Indonesia
Frontiers in Ecology and Evolution
2020
Correlation between Organelle Genetic Variation and RNA Editing in Dinoflagellates Associated with the Coral Acropora digitifera
Genome Biology and Evolution
2019
Extremophile symbionts in extreme environments; a contribution to the diversity of Symbiodiniaceae across the northern Persian Gulf and Gulf of Oman
Journal of Sea Research
2019
Towards an in-depth characterization of Symbiodiniaceae in tropical giant clams via metabarcoding of pooled multi-gene amplicons
PeerJ
2019
Multi-gene incongruence consistent with hybridisation inCladocopium(Symbiodiniaceae), an ecologically important genus of coral reef symbionts
PeerJ
2019
Differences in Symbiodiniaceae communities and photosynthesis following thermal bleaching of massive corals in the northern part of the South China Sea
Marine Pollution Bulletin
2019
Evolution, diversity, distribution and the endangered future of the giant clam–Symbiodiniaceae association
Coral Reefs
2019
SymPortal: A novel analytical framework and platform for coral algal symbiont next‐generation sequencing ITS2 profiling
Molecular Ecology Resources
2019
Unique quantitative Symbiodiniaceae signature of coral colonies revealed through spatio-temporal survey in Moorea
Scientific Reports
2019
Diversity of Symbiodiniaceae in 15 Coral Species From the Southern South China Sea: Potential Relationship With Coral Thermal Adaptability
Frontiers in Microbiology
2019
Coral Reefs of the World
2019
Photosynthesis by symbiotic sponges enhances their ability to erode calcium carbonate
Journal of Experimental Marine Biology and Ecology
2019
PROCEEDINGS OF THE 2ND INTERNATIONAL CONFERENCE ON BIOSCIENCE, BIOTECHNOLOGY, AND BIOMETRICS 2019
2018
Characterizing Photosymbiosis Between Fraginae Bivalves and Symbiodinium Using Phylogenetics and Stable Isotopes
Frontiers in Ecology and Evolution
2018
Phylogenetic analysis of symbiont transmission mechanisms reveal evolutionary patterns in thermotolerance and host specificity that enhance bleaching resistance among vertically transmittedSymbiodinium
European Journal of Phycology
2018
dinoref: A curated dinoflagellate (Dinophyceae) reference database for the 18S rRNA gene
Molecular Ecology Resources
2018
Symbiodinium-Induced Formation of Microbialites: Mechanistic Insights From in Vitro Experiments and the Prospect of Its Occurrence in Nature
Frontiers in Microbiology
2018
Inter-domain microbial diversity within the coral holobiontSiderastrea sidereafrom two depth habitats
PeerJ
2018
Worldwide Occurrence and Activity of the Reef-Building Coral Symbiont Symbiodinium in the Open Ocean
Current Biology
2018
Two divergent Symbiodinium genomes reveal conservation of a gene cluster for sunscreen biosynthesis and recently lost genes
BMC Genomics
2018
Flexible Symbiotic Associations of Symbiodinium With Five Typical Coral Species in Tropical and Subtropical Reef Regions of the Northern South China Sea
Frontiers in Microbiology
2018
Genotype and Phylogenetic Diversity of Symbiodinium ITS2 Sequences Within Clade C in Three Typical Coral Species from Luhuitou Fringing Reef of the South China Sea
Journal of Ocean University of China
2018
Cell Cycle Dynamics of Cultured Coral Endosymbiotic Microalgae (Symbiodinium) Across Different Types (Species) Under Alternate Light and Temperature Conditions
Journal of Eukaryotic Microbiology
2018
An improved primer set and amplification protocol with increased specificity and sensitivity targeting the Symbiodinium ITS2 region
PeerJ
2017
Biogeography and molecular diversity of coral symbionts in the genus Symbiodinium around the Arabian Peninsula
Journal of Biogeography
2017
An updated assessment ofSymbiodiniumspp. that associate with common scleractinian corals from Moorea (French Polynesia) reveals high diversity among background symbionts and a novel finding of clade B
PeerJ
2017
Identification of Genes for Synthesis of the Blue Pigment, Biliverdin IXα, in the Blue CoralHeliopora coerulea
The Biological Bulletin
2017
Signatures of adaptation and symbiosis in genomes and transcriptomes of Symbiodinium
Scientific Reports
2017
Consensus thermotolerance ranking for 110 Symbiodinium phylotypes: an exemplar utilization of a novel iterative partial‐rank aggregation tool with broad application potential
Functional Ecology
2017
A molecular physiology basis for functional diversity of hydrogen peroxide production amongst Symbiodinium spp. (Dinophyceae)
Marine Biology
2017
Expression of a symbiosis-specific gene in Symbiodinium type A1 associated with coral, nudibranch and giant clam larvae
Royal Society Open Science
2017
Marine Invertebrate Larvae Associated with Symbiodinium: A Mutualism from the Start?
Frontiers in Ecology and Evolution
2016
Evolution of bacterial recombinase A ( recA ) in eukaryotes explained by addition of genomic data of key microbial lineages
Proceedings of the Royal Society B: Biological Sciences
2016
The Cnidaria, Past, Present and Future
2016
Progressive and Biased Divergent Evolution Underpins the Origin and Diversification of Peridinin Dinoflagellate Plastids
Molecular Biology and Evolution
2016
The effects of Symbiodinium (Pyrrhophyta) identity on growth, survivorship, and thermal tolerance of newly settled coral recruits
Journal of Phycology
2016
Relative Contributions of Various Cellular Mechanisms to Loss of Algae during Cnidarian Bleaching
PLOS ONE
2016
The symbiotic life ofSymbiodiniumin the open ocean within a new species of calcifying ciliate (Tiarinasp.)
The ISME Journal
2016
Progress toward isolation of strains and genetically engineered strains of microalgae for production of biofuel and other value added chemicals: A review
Energy Conversion and Management
2016
Symbiodinium clades A and D differentially predispose Acropora cytherea to disease and Vibrio spp. colonization
Ecology and Evolution
2016
The Cnidaria, Past, Present and Future
2016
Discordant coral–symbiont structuring: factors shaping geographical variation of Symbiodinium communities in a facultative zooxanthellate coral genus, Oculina
Coral Reefs
2016
The mutational hazard hypothesis of organelle genome evolution: 10 years on
Molecular Ecology
2016
Molecular examination of rocky shore brachycnemic zoantharians (Anthozoa: Hexacorallia) and their Symbiodinium symbionts (Dinophyceae) in the southwest Indian Ocean
Marine Biodiversity
2016
Ancestral genetic diversity associated with the rapid spread of stress-tolerant coral symbionts in response to Holocene climate change
Proceedings of the National Academy of Sciences
2016
Biocommunication of Ciliates
2015
Coral symbiotic algae calcify ex hospite in partnership with bacteria
Proceedings of the National Academy of Sciences
2015
Transcriptomic characterization of the enzymatic antioxidants FeSOD, MnSOD, APX and KatG in the dinoflagellate genus Symbiodinium
BMC Evolutionary Biology
2015
The Large Mitochondrial Genome ofSymbiodinium minutumReveals Conserved Noncoding Sequences between Dinoflagellates and Apicomplexans
Genome Biology and Evolution
2015
Mitochondrial and plastid genome architecture: Reoccurring themes, but significant differences at the extremes
Proceedings of the National Academy of Sciences
2015
Dinoflagellate diversity among nudibranchs and sponges from French Polynesia: Insights into associations and transfer
Comptes Rendus. Biologies
2015
Depth specialization in mesophotic corals ( Leptoseris spp.) and associated algal symbionts in Hawai'i
Royal Society Open Science
2015
Fungal specificity and selectivity for algae play a major role in determining lichen partnerships across diverse ecogeographic regions in the lichen‐forming family Parmeliaceae (Ascomycota)
Molecular Ecology
2015
Mutation Rates in Plastid Genomes: They Are Lower than You Might Think
Genome Biology and Evolution
2015
Widespread prevalence of cryptic Symbiodinium D in the key Caribbean reef builder, Orbicella annularis
Coral Reefs
2014
Molecular characterization of symbiotic algae (Symbiodinium spp.) in soritid foraminifera (Sorites orbiculus) and a scleractinian coral (Orbicella annularis) from St John, US Virgin Islands
Marine Biology
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