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Jonghyun Kim, Fuzuki Mizuno, Takayuki Matsushita, Masami Matsushita, Saki Aoto, Koji Ishiya, Mami Kamio, Izumi Naka, Michiko Hayashi, Kunihiko Kurosaki, Shintaroh Ueda, Jun Ohashi

Ankit Sabharwal, Vishu Gupta, Shamsudheen KV, Ranjith Kumar Manokaran, Ankit Verma, Anushree Mishra, Rahul C. Bhoyar, Abhinav Jain, Ambily Sivadas, Sonali Rawat, Bani Jolly, Sujata Mohanty, Sheffali Gulati, Neerja Gupta, Madhulika Kabra, Vinod Scaria, Sridhar Sivasubbu

Sebastian Schönherr, Hansi Weissensteiner, Florian Kronenberg, Lukas Forer

Fuzuki Mizuno, Yasuhiro Taniguchi, Osamu Kondo, Michiko Hayashi, Kunihiko Kurosaki, Shintaroh Ueda

Fuzuki Mizuno, Fuyuki Tokanai, Masahiko Kumagai, Koji Ishiya, Saburo Sugiyama, Michiko Hayashi, Kunihiko Kurosaki, Shintaroh Ueda

Eddie K. K. Ip, Michael Troup, Colin Xu, David S. Winlaw, Sally L. Dunwoodie, Eleni Giannoulatou

DAISUKE WAKU, TAKASHI GAKUHARI, KAE KOGANEBUCHI, MINORU YONEDA, OSAMU KONDO, TADAYUKI MASUYAMA, YASUHIRO YAMADA, HIROKI OOTA

M.V. Emery, K. Bolhofner, S. Ghafoor, S. Winingear, J.E. Buikstra, L.C. Fulginiti, A.C. Stone

Shiori Miura, Akira Sasaki, Shuya Kasai, Takayuki Sugawara, Yasunori Maeda, Shinichi Goto, Takashi Kasai, Nami Shimizume, Songee Jung, Takuro Iwane, Ken Itoh, Atsushi Matsubara

Farhang Aghakhanian, Boon-Peng Hoh, Chee-Wei Yew, Vijay Kumar Subbiah, Yali Xue, Chris Tyler-Smith, Qasim Ayub, Maude E. Phipps

Filipe Cortes-Figueiredo, Filipa S. Carvalho, Ana Catarina Fonseca, Friedemann Paul, José M. Ferro, Sebastian Schönherr, Hansi Weissensteiner, Vanessa A. Morais

Víctor García-Olivares, Adrián Muñoz-Barrera, José M. Lorenzo-Salazar, Carlos Zaragoza-Trello, Luis A. Rubio-Rodríguez, Ana Díaz-de Usera, David Jáspez, Antonio Iñigo-Campos, Rafaela González-Montelongo, Carlos Flores

Fuzuki Mizuno, Jun Gojobori, Masahiko Kumagai, Hisao Baba, Yasuhiro Taniguchi, Osamu Kondo, Masami Matsushita, Takayuki Matsushita, Fumihiko Matsuda, Koichiro Higasa, Michiko Hayashi, Li Wang, Kunihiko Kurosaki, Shintaroh Ueda

Maria Angela Diroma, Alessandra Modi, Martina Lari, Luca Sineo, David Caramelli, Stefania Vai

Fuzuki Mizuno, Yasuhiro Taniguchi, Osamu Kondo, Michiko Hayashi, Kunihiko Kurosaki, Shintaroh Ueda

Lishuang Shen, Elizabeth M. McCormick, Colleen Clarke Muraresku, Marni J. Falk, Xiaowu Gai

Sanand Sandhya, Harsha Srivastava, Tanvi Kaila, Anshika Tyagi, Kishor Gaikwad

Takashi Gakuhari, Shigeki Nakagome, Simon Rasmussen, Morten E. Allentoft, Takehiro Sato, Thorfinn Korneliussen, Blánaid Ní Chuinneagáin, Hiromi Matsumae, Kae Koganebuchi, Ryan Schmidt, Souichiro Mizushima, Osamu Kondo, Nobuo Shigehara, Minoru Yoneda, Ryosuke Kimura, Hajime Ishida, Tadayuki Masuyama, Yasuhiro Yamada, Atsushi Tajima, Hiroki Shibata, Atsushi Toyoda, Toshiyuki Tsurumoto, Tetsuaki Wakebe, Hiromi Shitara, Tsunehiko Hanihara, Eske Willerslev, Martin Sikora, Hiroki Oota

Hieu Nguyen, Thomas LaFramboise

María Saiz, Luis Javier Martínez-Gonzalez, Jose Antonio Lorente, Maria Jesus Alvarez-Cubero

Filomena Melchionda, Florin Stanciu, Loredana Buscemi, Mauro Pesaresi, Adriano Tagliabracci, Chiara Turchi

Fuzuki Mizuno, Koji Ishiya, Masami Matsushita, Takayuki Matsushita, Katherine Hampson, Michiko Hayashi, Fuyuki Tokanai, Kunihiko Kurosaki, Shintaroh Ueda

Fahad Alqahtani, Ion I. Măndoiu

Fuzuki MIZUNO, Jun GOJOBORI

Koji Ishiya, Fuzuki Mizuno, Li Wang, Shintaroh Ueda

Koji Ishiya, Shintaroh Ueda

2025	Genetic analysis of a Yayoi individual from the Doigahama site provides insights into the origins of immigrants to the Japanese Archipelago Journal of Human Genetics Jonghyun Kim, Fuzuki Mizuno, Takayuki Matsushita, Masami Matsushita, Saki Aoto, Koji Ishiya, Mami Kamio, Izumi Naka, Michiko Hayashi, Kunihiko Kurosaki, Shintaroh Ueda, Jun Ohashi
2024	Whole genome sequencing followed by functional analysis of genomic deletion encompassing ERCC8 and NDUFAF2 genes in a non-consanguineous Indian family reveals dysfunctional mitochondrial bioenergetics leading to infant mortality Mitochondrion Ankit Sabharwal, Vishu Gupta, Shamsudheen KV, Ranjith Kumar Manokaran, Ankit Verma, Anushree Mishra, Rahul C. Bhoyar, Abhinav Jain, Ambily Sivadas, Sonali Rawat, Bani Jolly, Sujata Mohanty, Sheffali Gulati, Neerja Gupta, Madhulika Kabra, Vinod Scaria, Sridhar Sivasubbu
2023	Haplogrep 3 - an interactive haplogroup classification and analysis platform Nucleic Acids Research Sebastian Schönherr, Hansi Weissensteiner, Florian Kronenberg, Lukas Forer
2023	Diversity in matrilineages among the Jomon individuals of Japan Annals of Human Biology Fuzuki Mizuno, Yasuhiro Taniguchi, Osamu Kondo, Michiko Hayashi, Kunihiko Kurosaki, Shintaroh Ueda
2023	Bioarchaeological study of ancient Teotihuacans based on complete mitochondrial genome sequences and diet isotopes Annals of Human Biology Fuzuki Mizuno, Fuyuki Tokanai, Masahiko Kumagai, Koji Ishiya, Saburo Sugiyama, Michiko Hayashi, Kunihiko Kurosaki, Shintaroh Ueda
2022	Benchmarking the Effectiveness and Accuracy of Multiple Mitochondrial DNA Variant Callers: Practical Implications for Clinical Application Frontiers in Genetics Eddie K. K. Ip, Michael Troup, Colin Xu, David S. Winlaw, Sally L. Dunwoodie, Eleni Giannoulatou
2022	Complete mitochondrial genome sequencing reveals double-buried Jomon individuals excavated from the Ikawazu shell-mound site were not in a mother–child relationship Anthropological Science DAISUKE WAKU, TAKASHI GAKUHARI, KAE KOGANEBUCHI, MINORU YONEDA, OSAMU KONDO, TADAYUKI MASUYAMA, YASUHIRO YAMADA, HIROKI OOTA
2022	Whole mitochondrial genomes assembled from thermally altered forensic bones and teeth Forensic Science International: Genetics M.V. Emery, K. Bolhofner, S. Ghafoor, S. Winingear, J.E. Buikstra, L.C. Fulginiti, A.C. Stone
2022	Association of mitochondrial DNA haplogroup and hearing impairment with aging in Japanese general population of the Iwaki Health Promotion Project Journal of Human Genetics Shiori Miura, Akira Sasaki, Shuya Kasai, Takayuki Sugawara, Yasunori Maeda, Shinichi Goto, Takashi Kasai, Nami Shimizume, Songee Jung, Takuro Iwane, Ken Itoh, Atsushi Matsubara
2022	Sequence analyses of Malaysian Indigenous communities reveal historical admixture between Hoabinhian hunter-gatherers and Neolithic farmers Scientific Reports Farhang Aghakhanian, Boon-Peng Hoh, Chee-Wei Yew, Vijay Kumar Subbiah, Yali Xue, Chris Tyler-Smith, Qasim Ayub, Maude E. Phipps
2021	From Forensics to Clinical Research: Expanding the Variant Calling Pipeline for the Precision ID mtDNA Whole Genome Panel International Journal of Molecular Sciences Filipe Cortes-Figueiredo, Filipa S. Carvalho, Ana Catarina Fonseca, Friedemann Paul, José M. Ferro, Sebastian Schönherr, Hansi Weissensteiner, Vanessa A. Morais
2021	A benchmarking of human mitochondrial DNA haplogroup classifiers from whole-genome and whole-exome sequence data Scientific Reports Víctor García-Olivares, Adrián Muñoz-Barrera, José M. Lorenzo-Salazar, Carlos Zaragoza-Trello, Luis A. Rubio-Rodríguez, Ana Díaz-de Usera, David Jáspez, Antonio Iñigo-Campos, Rafaela González-Montelongo, Carlos Flores
2021	Population dynamics in the Japanese Archipelago since the Pleistocene revealed by the complete mitochondrial genome sequences Scientific Reports Fuzuki Mizuno, Jun Gojobori, Masahiko Kumagai, Hisao Baba, Yasuhiro Taniguchi, Osamu Kondo, Masami Matsushita, Takayuki Matsushita, Fumihiko Matsuda, Koichiro Higasa, Michiko Hayashi, Li Wang, Kunihiko Kurosaki, Shintaroh Ueda
2021	New Insights Into Mitochondrial DNA Reconstruction and Variant Detection in Ancient Samples Frontiers in Genetics Maria Angela Diroma, Alessandra Modi, Martina Lari, Luca Sineo, David Caramelli, Stefania Vai
2020	A study of 8,300-year-old Jomon human remains in Japan using complete mitogenome sequences obtained by next-generation sequencing Annals of Human Biology Fuzuki Mizuno, Yasuhiro Taniguchi, Osamu Kondo, Michiko Hayashi, Kunihiko Kurosaki, Shintaroh Ueda
2020	Clinical Bioinformatics in Precise Diagnosis of Mitochondrial Disease Clinics in Laboratory Medicine Lishuang Shen, Elizabeth M. McCormick, Colleen Clarke Muraresku, Marni J. Falk, Xiaowu Gai
2020	Methods in Molecular Biology Sanand Sandhya, Harsha Srivastava, Tanvi Kaila, Anshika Tyagi, Kishor Gaikwad
2020	Ancient Jomon genome sequence analysis sheds light on migration patterns of early East Asian populations Communications Biology Takashi Gakuhari, Shigeki Nakagome, Simon Rasmussen, Morten E. Allentoft, Takehiro Sato, Thorfinn Korneliussen, Blánaid Ní Chuinneagáin, Hiromi Matsumae, Kae Koganebuchi, Ryan Schmidt, Souichiro Mizushima, Osamu Kondo, Nobuo Shigehara, Minoru Yoneda, Ryosuke Kimura, Hajime Ishida, Tadayuki Masuyama, Yasuhiro Yamada, Atsushi Tajima, Hiroki Shibata, Atsushi Toyoda, Toshiyuki Tsurumoto, Tetsuaki Wakebe, Hiromi Shitara, Tsunehiko Hanihara, Eske Willerslev, Martin Sikora, Hiroki Oota
2020	Complexities and pitfalls in analyzing and interpreting mitochondrial DNA content in human cancer Journal of Genetics and Genomics Hieu Nguyen, Thomas LaFramboise
2020	Forensic DNA Typing: Principles, Applications and Advancements María Saiz, Luis Javier Martínez-Gonzalez, Jose Antonio Lorente, Maria Jesus Alvarez-Cubero
2020	Searching the undetected mtDNA variants in forensic MPS data Forensic Science International: Genetics Filomena Melchionda, Florin Stanciu, Loredana Buscemi, Mauro Pesaresi, Adriano Tagliabracci, Chiara Turchi
2020	A biomolecular anthropological investigation of William Adams, the first SAMURAI from England Scientific Reports Fuzuki Mizuno, Koji Ishiya, Masami Matsushita, Takayuki Matsushita, Katherine Hampson, Michiko Hayashi, Fuyuki Tokanai, Kunihiko Kurosaki, Shintaroh Ueda
2020	Lecture Notes in Computer Science Fahad Alqahtani, Ion I. Măndoiu
2020	From the Analysis of Minatogawa Whole Mitochondrial DNA Sequence TRENDS IN THE SCIENCES Fuzuki MIZUNO, Jun GOJOBORI
2019	MitoIMP: A Computational Framework for Imputation of Missing Data in Low-Coverage Human Mitochondrial Genome Bioinformatics and Biology Insights Koji Ishiya, Fuzuki Mizuno, Li Wang, Shintaroh Ueda
2019	Novel approach for accurate detection of contaminating human mitochondrial DNA in next-generation sequencing data Journal of Physics: Conference Series Koji Ishiya, Shintaroh Ueda
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