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2025
Gut response to the dietary supplementation with sodium butyrate in broiler chickens: morphology and microbiota composition and predictive functional groups
Italian Journal of Animal Science
2025
Metagenomic investigations of the gut microbiota of northern and southern Nigerian Village Weaver (Ploceus cucullatus) populations revealed zoonotic pathogens of public health importance
Biologia
2025
Parents greater influenced the fecal microbiome and resistome of ibis nestlings than artifical breeding environment contamination
Environmental Research
2025
Canada goose fecal microbiota correlate with geography more than host‐associated factors
Journal of Avian Biology
2025
Urbanization and the Gut Microbiome: Insights From the Anna’s Hummingbird (Calypte anna) in California
Integrative And Comparative Biology
2025
Host identity drives the assembly of phytoplankton microbiomes across a continental-scale environmental gradient
The ISME Journal
2025
Seasonal variation in gut microbiota of migratory wild raptors: a case study in white-tailed eagles
Animal Microbiome
2025
Exploring Bird Gut Microbiota Through Opportunistic Fecal Sampling: Ecological and Evolutionary Perspectives
Ecology and Evolution
2025
Dynamic changes in the avian gut microbiome in response to diverse lifestyles
Ibis
2025
The Impact of Whole‐Animal Fluid Preservation on the Observed Gut Microbiome of Vertebrates: Implications for the Use of Museum Specimens in Microbiome Research
Molecular Ecology Resources
2025
Microbiome Comparison and Pathogen Identification for Three Migrating Passerines Captured During Spring Season in Jordan Using 16S rRNA Sequencing
Integrative And Comparative Biology
2025
Comparative analysis of fecal microbiota of central and eastern black-necked cranes (Grus nigricollis) wintering in Yunnan Province, China
PeerJ
2024
Host avian species and environmental conditions influence the microbial ecology of brood parasitic brown‐headed cowbird nestlings: What rules the roost?
Molecular Ecology
2024
The reproductive microbiome and maternal transmission of microbiota via eggs in Sceloporus virgatus
FEMS Microbiology Ecology
2024
Melittology - New Advances
2024
El parasitismo de nido como estrategia de supervivencia en el género Molothrus spp
Revista Colombiana de Ciencia Animal - RECIA
2024
Structure, variation and assembly of body‐wide microbiomes in endangered crested ibisNipponia nippon
Molecular Ecology
2024
Subclinical peripheral inflammation has systemic effects impacting central nervous system proteome in budgerigars
Developmental & Comparative Immunology
2024
Comparative Analyses of Lycodon rufozonatus and Lycodon rosozonatus Gut Microbiota in Different Regions
Ecology and Evolution
2024
Metagenomic comparison of gut communities between wild and captive Himalayan griffons
Frontiers in Veterinary Science
2024
The impact of management on the fecal microbiome of endangered greater sage-grouse (Centrocercus urophasianus) in a zoo-based conservation program
Conservation Physiology
2024
Symbiotic Synergy from Sponges to Humans: Microflora–Host Harmony Is Crucial for Ensuring Survival and Shielding against Invading Pathogens
ACS Infectious Diseases
2024
The gut microbiota of three avian species living in sympatry
BMC Ecology and Evolution
2024
Variations of gut microbiota in the wintering black-necked crane (Grus nigricollis) at local and regional scales and its management implications
Global Ecology and Conservation
2024
Manipulating a host-native microbial strain compensates for low microbial diversity by increasing weight gain in a wild bird population
Proceedings of the National Academy of Sciences
2024
The Influence of Microbiota on Wild Birds’ Parental Coprophagy Behavior: Current Advances and Future Research Directions
Microorganisms
2024
Stopover habitat selection drives variation in the gut microbiome composition and pathogen acquisition by migrating shorebirds
FEMS Microbiology Ecology
2024
Winged resistance: Storks and gulls increase carriage of antibiotic resistance by shifting from paddy fields to landfills
Science of The Total Environment
2024
Migratory Shorebird Gut Microbes are not Associated with Bivalve Prey in Monsoon Tropical Australia
Current Microbiology
2023
The microbiome of African penguins (Spheniscus demersus) under managed care resembles that of wild marine mammals and birds
Scientific Reports
2023
Comparison of the Gut Microbial Communities of Domestic and Wild Mallards (Anas platyrhynchos) Based on High-Throughput Sequencing Technology
Animals
2023
Three species of axenic mosquito larvae recruit a shared core of bacteria in a common garden experiment
Applied and Environmental Microbiology
2023
Gut microbiome composition better reflects host phylogeny than diet diversity in breeding wood‐warblers
Molecular Ecology
2023
No evidence for associations between brood size, gut microbiome diversity and survival in great tit (Parus major) nestlings
Animal Microbiome
2023
Fascinating Life Sciences
2023
Comparative analysis of the gut microbiota of wild wintering whooper swans (Cygnus Cygnus), captive black swans (Cygnus Atratus), and mute swans (Cygnus Olor) in Sanmenxia Swan National Wetland Park of China
Environmental Science and Pollution Research
2023
Disentangling relationships between physiology, morphology, diet, and gut microbial diversity in American kestrel nestlings
Journal of Avian Biology
2023
Avian Malaria Parasites Modulate Gut Microbiome Assembly in Canaries
Microorganisms
2023
Indirect maternal effects via nest microbiome composition drive gut colonization in altricial chicks
Molecular Ecology
2023
Intestinal microbiota of Nearctic‐Neotropical migratory birds vary more over seasons and years than between host species
Molecular Ecology
2023
The gut microbiota diversity of five Orthoptera (Insecta, Polyneoptera) insects determined by DNA metabarcoding
Biodiversity Data Journal
2023
Comparison of the Intestinal Bacterial Communities between Captive and Semi-Free-Range Red-Crowned Cranes (Grus japonensis) before Reintroduction in Zhalong National Nature Reserve, China
Animals
2023
Microbiomes associated with avian malaria survival differ between susceptible Hawaiian honeycreepers and sympatric malaria‐resistant introduced birds
Molecular Ecology
2023
Cloacal microbiota are biogeographically structured in larks from desert, tropical and temperate areas
BMC Microbiology
2022
Eggshell microbiota of a brood parasite reflects environment, not species
Journal of Ornithology
2022
The avian gut microbiota: Diversity, influencing factors, and future directions
Frontiers in Microbiology
2022
Tree Species Diversity and Forest Edge Density Jointly Shape the Gut Microbiota Composition in Juvenile Great Tits (Parus major)
Frontiers in Microbiology
2022
Effect of sex on the gut microbiota characteristics of passerine migratory birds
Frontiers in Microbiology
2022
Diet drives the gut microbiome composition and assembly processes in winter migratory birds in the Poyang Lake wetland, China
Frontiers in Microbiology
2022
Incomplete Concordance Between Host Phylogeny and Gut Microbial Community in Tibetan Wetland Birds
Frontiers in Microbiology
2022
The Enclosed Intestinal Microbiome: Semiochemical Signals from the Precambrian and Their Disruption by Heavy Metal Pollution
Life
2022
Exploring the Ecological Implications of Microbiota Diversity in Birds: Natural Barriers Against Avian Malaria
Frontiers in Immunology
2022
Timing matters: age-dependent impacts of the social environment and host selection on the avian gut microbiota
Microbiome
2022
Avian gut microbiomes taking flight
Trends in Microbiology
2022
No Guts About It: Captivity, But Not Neophobia Phenotype, Influences the Cloacal Microbiome of House Sparrows (Passer domesticus)
Integrative Organismal Biology
2022
Relationships Between Migration and Microbiome Composition and Diversity in Urban Canada Geese
Frontiers in Ecology and Evolution
2022
Dominant factors shaping the gut microbiota of wild birds
Emu - Austral Ornithology
2021
Free-living birds from Caatinga and Atlantic Forest of northeast Brazil as hosts of Enterobacterales, Mycoplasma spp., and Chlamydia psittaci
Ornithology Research
2021
Repeated sampling of individuals reveals impact of tropical and temperate habitats on microbiota of a migratory bird
Molecular Ecology
2021
Gut microbiota in two recently diverged passerine species: evaluating the effects of species identity, habitat use and geographic distance
BMC Ecology and Evolution
2021
Bacterial microbiota similarity between predators and prey in a blue tit trophic network
The ISME Journal
2021
The Gut Microbial Composition Is Species-Specific and Individual-Specific in Two Species of Estrildid Finches, the Bengalese Finch and the Zebra Finch
Frontiers in Microbiology
2021
Covariation of the Fecal Microbiome with Diet in Nonpasserine Birds
mSphere
2021
Species-specific but not phylosymbiotic gut microbiomes of New Guinean passerine birds are shaped by diet and flight-associated gut modifications
Proceedings of the Royal Society B: Biological Sciences
2021
Elevation Correlates With Significant Changes in Relative Abundance in Hummingbird Fecal Microbiota, but Composition Changes Little
Frontiers in Ecology and Evolution
2021
The Microbiomes of Humans, Animals, Plants, and the Environment
2021
Flexibility and resilience of great tit (Parus major) gut microbiomes to changing diets
Animal Microbiome
2021
Establishment of Gut Microbiome During Early Life and Its Relationship With Growth in Endangered Crested Ibis (Nipponia nippon)
Frontiers in Microbiology
2021
Geography as non-genetic modulation factor of chicken cecal microbiota
PLOS ONE
2021
Host specificity of microbiome assembly and its fitness effects in phytoplankton
The ISME Journal
2021
Exploring the faecal microbiome of the Eurasian nuthatch (Sitta europaea)
Archives of Microbiology
2020
Significant Differences in the Gut Bacterial Communities of Hooded Crane (Grus monacha) in Different Seasons at a Stopover Site on the Flyway
Animals
2020
Evolutionary signal in the gut microbiomes of 74 bird species from Equatorial Guinea
Molecular Ecology
2020
Comparative Analysis of the Gut Microbial Communities of the Eurasian Kestrel (Falco tinnunculus) at Different Developmental Stages
Frontiers in Microbiology
2020
Interactions between social groups of colobus monkeys (Colobus vellerosus) explain similarities in their gut microbiomes
Animal Behaviour
2020
Maternal gut microbes shape the early-life assembly of gut microbiota in passerine chicks via nests
Microbiome
2020
The Nidobiome: A Framework for Understanding Microbiome Assembly in Neonates
Trends in Ecology & Evolution
2020
Gut microbiota in a host–brood parasite system: insights from common cuckoos raised by two warbler species
FEMS Microbiology Ecology
2020
Family matters: skin microbiome reflects the social group and spatial proximity in wild zebra finches
BMC Ecology
2020
Comparing the intestinal bacterial communies of sympatric wintering Hooded Crane (Grus monacha) and Domestic Goose (Anser anser domesticus)
Avian Research
2020
Movement ecology and sex are linked to barn owl microbial community composition
Molecular Ecology
2020
Gut microbiomes of sympatric Amazonian wood‐eating catfishes (Loricariidae) reflect host identity and little role in wood digestion
Ecology and Evolution
2020
The effect of toxic pyridine-alkaloid secondary metabolites on the sunbird gut microbiome
npj Biofilms and Microbiomes
2019
Comparative metagenomics of the gut microbiota in wild greylag geese (Anser anser) and ruddy shelducks (Tadorna ferruginea)
MicrobiologyOpen
2019
Composition and Drivers of Gut Microbial Communities in Arctic-Breeding Shorebirds
Frontiers in Microbiology
2019
Microbial Ecology of the Western Gull (Larus occidentalis)
Microbial Ecology
2019
Cloacal microbiomes and ecology of individual barn swallows
FEMS Microbiology Ecology
2019
Variations in gut bacterial communities of hooded crane (Grus monacha) over spatial-temporal scales
PeerJ
2019
Significant Differences in Bacterial and Potentially Pathogenic Communities Between Sympatric Hooded Crane and Greater White-Fronted Goose
Frontiers in Microbiology
2019
Host phylogeny, diet, and habitat differentiate the gut microbiomes of Darwin’s finches on Santa Cruz Island
Scientific Reports
2019
Comparative analysis of the fecal microbiota from different species of domesticated and wild suids
Scientific Reports
2019
An inter-island comparison of Darwin’s finches reveals the impact of habitat, host phylogeny, and island on the gut microbiome
PLOS ONE
2019
Comparative analysis of the gut microbiota of hornbill and toucan in captivity
MicrobiologyOpen
2018
Cecal Microbiome Analyses on Wild Japanese Rock Ptarmigans (Lagopus muta japonica) Reveals High Level of Coexistence of Lactic Acid Bacteria and Lactate-Utilizing Bacteria
Microorganisms
2018
A Non-invasive Method to Collect Fecal Samples from Wild Birds for Microbiome Studies
Microbial Ecology
2018
Gut Microbiota of Great Spotted Cuckoo Nestlings is a Mixture of Those of Their Foster Magpie Siblings and of Cuckoo Adults
Genes
2018
Comparative Analyses of the Digestive Tract Microbiota of New Guinean Passerine Birds
Frontiers in Microbiology
2018
Habitat environments impacted the gut microbiome of long-distance migratory swan geese but central species conserved
Scientific Reports
2018
The gut of the finch: uniqueness of the gut microbiome of the Galápagos vampire finch
Microbiome
2018
Olfactory Communication via Microbiota: What Is Known in Birds?
Genes
2018
Fecal microbiota associated with phytohaemagglutinin‐induced immune response in nestlings of a passerine bird
Ecology and Evolution
2018
Cloacal microbiota of barn swallows from Northern Italy
Ethology Ecology & Evolution
2018
Comparative analyses of the gut microbiota among three different wild geese species in the genus Anser
Journal of Basic Microbiology
2018
Dynamics of Gut Microbiota Diversity During the Early Development of an Avian Host: Evidence From a Cross-Foster Experiment
Frontiers in Microbiology
2018
Compositional and predicted functional analysis of the gut microbiota of Radix auricularia (Linnaeus) via high-throughput Illumina sequencing
PeerJ
2018
Comparison of gizzard and intestinal microbiota of wild neotropical birds
PLOS ONE
2018
The Cloacal Microbiome of Five Wild Duck Species Varies by Species and Influenza A Virus Infection Status
mSphere
2018
Links between bacteria derived from penguin guts and deposited guano and the surrounding soil microbiota
Polar Biology
2018
The avian gut microbiota: community, physiology and function in wild birds
Journal of Avian Biology
2018
Inside the guts of the city: Urban-induced alterations of the gut microbiota in a wild passerine
Science of The Total Environment
2018
The Effects of Landscape Urbanization on the Gut Microbiome: An Exploration Into the Gut of Urban and Rural White-Crowned Sparrows
Frontiers in Ecology and Evolution
2017
The gut microbiome of hooded cranes (Grus monacha) wintering at Shengjin Lake, China
MicrobiologyOpen
2017
What Thrives Inside; The World Within the Gut
Frontiers for Young Minds
2017
Great cormorants (Phalacrocorax carbo) as potential vectors for the dispersal of Vibrio cholerae
Scientific Reports
2017
Variation between the oral and faecal microbiota in a free-living passerine bird, the great tit (Parus major)
PLOS ONE
2017
Changes in gut microbiota of migratory passerines during stopover after crossing an ecological barrier
The Auk
2017
Testosterone levels are positively correlated with cloacal bacterial diversity and the relative abundance of Chlamydiae in breeding male rufous‐collared sparrows
Functional Ecology
2017
Bacterial community composition in Adélie (Pygoscelis adeliae) and Chinstrap (Pygoscelis antarctica) Penguin stomach contents from Signy Island, South Orkney Islands
Polar Biology
2017
Evolutionary Biology Needs Wild Microbiomes
Frontiers in Microbiology
2016
Microbiome evolution along divergent branches of the vertebrate tree of life: what is known and unknown
Molecular Ecology
2016
Social Environment Has a Primary Influence on the Microbial and Odor Profiles of a Chemically Signaling Songbird
Frontiers in Ecology and Evolution
2016
Characterization of the gut microbiota of migratory passerines during stopover along the northern coast of the Gulf of Mexico
Journal of Avian Biology
2015
Estimation of Cultivable Bacterial Diversity in the Cloacae and Pharynx in Eurasian Griffon Vultures (Gyps fulvus)
Microbial Ecology
2015
Comparative Gut Microbiota of 59 Neotropical Bird Species
Frontiers in Microbiology
2015
Habitat fragmentation is associated to gut microbiota diversity of an endangered primate: implications for conservation
Scientific Reports
2015
Phylogenetic Analysis of Bacterial Communities in Different Regions of the Gastrointestinal Tract of Agkistrodon piscivorus, the Cottonmouth Snake
PLOS ONE
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